RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
TRBV22-1-201ENST00000424543 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
TRBV22-1-201ENST00000424543 PLEKHH1Q9ULM0 1364 aa17.5■□□□□ 0.39
TRBV22-1-201ENST00000424543 NUTM2FA1L443 756 aa17.49■□□□□ 0.39
TRBV22-1-201ENST00000424543 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRBV22-1-201ENST00000424543 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
TRBV22-1-201ENST00000424543 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
TRBV22-1-201ENST00000424543 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
TRBV22-1-201ENST00000424543 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
TRBV22-1-201ENST00000424543 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
TRBV22-1-201ENST00000424543 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
TRBV22-1-201ENST00000424543 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
TRBV22-1-201ENST00000424543 PXDNQ92626 1479 aa17.45■□□□□ 0.38
TRBV22-1-201ENST00000424543 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
TRBV22-1-201ENST00000424543 PIK3C2GO75747 1445 aa17.45■□□□□ 0.38
TRBV22-1-201ENST00000424543 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
TRBV22-1-201ENST00000424543 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
TRBV22-1-201ENST00000424543 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
TRBV22-1-201ENST00000424543 LRPPRCP42704 1394 aaKnown RBP17.43■□□□□ 0.38
TRBV22-1-201ENST00000424543 TECPR2O15040 1411 aa17.43■□□□□ 0.38
TRBV22-1-201ENST00000424543 MYOM2P54296 1465 aa17.42■□□□□ 0.38
TRBV22-1-201ENST00000424543 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
TRBV22-1-201ENST00000424543 FOXO3O43524 673 aa17.41■□□□□ 0.38
TRBV22-1-201ENST00000424543 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
TRBV22-1-201ENST00000424543 EP400Q96L91 3159 aa17.4■□□□□ 0.38
TRBV22-1-201ENST00000424543 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
TRBV22-1-201ENST00000424543 USP21Q9UK80 565 aa17.39■□□□□ 0.37
TRBV22-1-201ENST00000424543 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
TRBV22-1-201ENST00000424543 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
TRBV22-1-201ENST00000424543 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
TRBV22-1-201ENST00000424543 NRXN1Q9ULB1 1477 aa17.37■□□□□ 0.37
TRBV22-1-201ENST00000424543 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
TRBV22-1-201ENST00000424543 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRBV22-1-201ENST00000424543 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
TRBV22-1-201ENST00000424543 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
TRBV22-1-201ENST00000424543 ATRNO75882 1429 aa17.36■□□□□ 0.37
TRBV22-1-201ENST00000424543 USP32Q8NFA0 1604 aa17.35■□□□□ 0.37
TRBV22-1-201ENST00000424543 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
TRBV22-1-201ENST00000424543 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
TRBV22-1-201ENST00000424543 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
TRBV22-1-201ENST00000424543 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.36
TRBV22-1-201ENST00000424543 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
TRBV22-1-201ENST00000424543 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
TRBV22-1-201ENST00000424543 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
TRBV22-1-201ENST00000424543 PLCH1Q4KWH8 1693 aa17.31■□□□□ 0.36
TRBV22-1-201ENST00000424543 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
TRBV22-1-201ENST00000424543 GLI3P10071 1580 aa17.3■□□□□ 0.36
TRBV22-1-201ENST00000424543 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
TRBV22-1-201ENST00000424543 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
TRBV22-1-201ENST00000424543 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
TRBV22-1-201ENST00000424543 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
TRBV22-1-201ENST00000424543 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
TRBV22-1-201ENST00000424543 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
TRBV22-1-201ENST00000424543 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
TRBV22-1-201ENST00000424543 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
TRBV22-1-201ENST00000424543 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.35
TRBV22-1-201ENST00000424543 ADGRB2O60241 1585 aa17.27■□□□□ 0.35
TRBV22-1-201ENST00000424543 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.35
TRBV22-1-201ENST00000424543 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
TRBV22-1-201ENST00000424543 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
TRBV22-1-201ENST00000424543 SLIT2O94813 1529 aa17.26■□□□□ 0.35
TRBV22-1-201ENST00000424543 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
TRBV22-1-201ENST00000424543 KDM2AQ9Y2K7 1162 aa17.25■□□□□ 0.35
TRBV22-1-201ENST00000424543 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
TRBV22-1-201ENST00000424543 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
TRBV22-1-201ENST00000424543 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
TRBV22-1-201ENST00000424543 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
TRBV22-1-201ENST00000424543 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
TRBV22-1-201ENST00000424543 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
TRBV22-1-201ENST00000424543 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
TRBV22-1-201ENST00000424543 POGKQ9P215 609 aa17.23■□□□□ 0.35
TRBV22-1-201ENST00000424543 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
TRBV22-1-201ENST00000424543 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
TRBV22-1-201ENST00000424543 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
TRBV22-1-201ENST00000424543 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
TRBV22-1-201ENST00000424543 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.34
TRBV22-1-201ENST00000424543 UNC5CLQ8IV45 518 aa17.2■□□□□ 0.34
TRBV22-1-201ENST00000424543 DCAF11Q8TEB1 546 aa17.2■□□□□ 0.34
TRBV22-1-201ENST00000424543 CRYBG1Q9Y4K1 1723 aa17.2■□□□□ 0.34
TRBV22-1-201ENST00000424543 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
TRBV22-1-201ENST00000424543 SBNO1A3KN83 1393 aa17.18■□□□□ 0.34
TRBV22-1-201ENST00000424543 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
TRBV22-1-201ENST00000424543 PSME1Q06323 249 aa17.18■□□□□ 0.34
TRBV22-1-201ENST00000424543 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
TRBV22-1-201ENST00000424543 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
TRBV22-1-201ENST00000424543 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
TRBV22-1-201ENST00000424543 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
TRBV22-1-201ENST00000424543 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
TRBV22-1-201ENST00000424543 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
TRBV22-1-201ENST00000424543 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
TRBV22-1-201ENST00000424543 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
TRBV22-1-201ENST00000424543 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
TRBV22-1-201ENST00000424543 ATP7BP35670 1465 aa17.12■□□□□ 0.33
TRBV22-1-201ENST00000424543 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
TRBV22-1-201ENST00000424543 VPS72Q15906 364 aa17.11■□□□□ 0.33
TRBV22-1-201ENST00000424543 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
TRBV22-1-201ENST00000424543 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
TRBV22-1-201ENST00000424543 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
TRBV22-1-201ENST00000424543 KIAA1210Q9ULL0 1709 aa17.08■□□□□ 0.32
TRBV22-1-201ENST00000424543 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms