RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
VPS8-204ENST00000424463 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
VPS8-204ENST00000424463 PTMAP06454 111 aaKnown RBP11.17□□□□□ -0.62
VPS8-204ENST00000424463 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
VPS8-204ENST00000424463 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
VPS8-204ENST00000424463 RICTORQ6R327 1708 aa11.17□□□□□ -0.62
VPS8-204ENST00000424463 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
VPS8-204ENST00000424463 RTL5Q5HYW3 569 aaPredicted RBP11.17□□□□□ -0.62
VPS8-204ENST00000424463 TSPOAP1O95153 1857 aa11.16□□□□□ -0.62
VPS8-204ENST00000424463 ABCC3O15438 1527 aa11.16□□□□□ -0.62
VPS8-204ENST00000424463 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
VPS8-204ENST00000424463 TMEM51Q9NW97 253 aa11.16□□□□□ -0.62
VPS8-204ENST00000424463 TMF1P82094 1093 aa11.16□□□□□ -0.62
VPS8-204ENST00000424463 PPM1GO15355 546 aaPredicted RBP11.15□□□□□ -0.62
VPS8-204ENST00000424463 CWC22Q9HCG8 908 aaKnown RBP11.15□□□□□ -0.62
VPS8-204ENST00000424463 PANK3Q9H999 370 aa11.14□□□□□ -0.63
VPS8-204ENST00000424463 LAMC1P11047 1609 aa11.14□□□□□ -0.63
VPS8-204ENST00000424463 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
VPS8-204ENST00000424463 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
VPS8-204ENST00000424463 CLGNO14967 610 aa11.13□□□□□ -0.63
VPS8-204ENST00000424463 NEFMP07197 916 aa11.13□□□□□ -0.63
VPS8-204ENST00000424463 NOS1P29475 1434 aa11.13□□□□□ -0.63
VPS8-204ENST00000424463 IDI1Q13907 227 aa11.13□□□□□ -0.63
VPS8-204ENST00000424463 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
VPS8-204ENST00000424463 COL17A1Q9UMD9 1497 aaPredicted RBP11.13□□□□□ -0.63
VPS8-204ENST00000424463 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
VPS8-204ENST00000424463 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
VPS8-204ENST00000424463 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
VPS8-204ENST00000424463 MROH2AA6NES4 1674 aa11.12□□□□□ -0.63
VPS8-204ENST00000424463 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
VPS8-204ENST00000424463 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
VPS8-204ENST00000424463 MLECQ14165 292 aa11.11□□□□□ -0.63
VPS8-204ENST00000424463 KIF1BO60333 1816 aa11.11□□□□□ -0.63
VPS8-204ENST00000424463 PTMSP20962 102 aa11.11□□□□□ -0.63
VPS8-204ENST00000424463 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
VPS8-204ENST00000424463 TMEM132EQ6IEE7 984 aa11.11□□□□□ -0.63
VPS8-204ENST00000424463 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
VPS8-204ENST00000424463 TMC1Q8TDI8 760 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 MYOM2P54296 1465 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
VPS8-204ENST00000424463 RALBP1Q15311 655 aa11.09□□□□□ -0.63
VPS8-204ENST00000424463 TRAK1Q9UPV9 953 aa11.09□□□□□ -0.63
VPS8-204ENST00000424463 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
VPS8-204ENST00000424463 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.634e-8■□□□□ 8.1
VPS8-204ENST00000424463 C14orf93Q9H972 538 aaKnown RBP11.09□□□□□ -0.63
VPS8-204ENST00000424463 SYNMO15061 1565 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 ZMYM4Q5VZL5 1548 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 FKBP8Q14318 412 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 NRXN1Q9ULB1 1477 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
VPS8-204ENST00000424463 PHF14O94880 888 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 NBR1Q14596 966 aa11.08□□□□□ -0.64
VPS8-204ENST00000424463 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
VPS8-204ENST00000424463 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
VPS8-204ENST00000424463 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
VPS8-204ENST00000424463 ZNF526Q8TF50 670 aaPredicted RBP11.06□□□□□ -0.64
VPS8-204ENST00000424463 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 PSEN1P49768 467 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 ANAPC15P60006 121 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 PIK3C2GO75747 1445 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 HDAC5Q9UQL6 1122 aa11.05□□□□□ -0.64
VPS8-204ENST00000424463 MAFGO15525 162 aa11.04□□□□□ -0.64
VPS8-204ENST00000424463 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
VPS8-204ENST00000424463 KIF13AQ9H1H9 1805 aa11.04□□□□□ -0.64
VPS8-204ENST00000424463 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
VPS8-204ENST00000424463 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
VPS8-204ENST00000424463 BRD4O60885 1362 aaPredicted RBP11.04□□□□□ -0.64
VPS8-204ENST00000424463 ZBED9Q6R2W3 1325 aa11.03□□□□□ -0.64
VPS8-204ENST00000424463 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
VPS8-204ENST00000424463 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
VPS8-204ENST00000424463 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
VPS8-204ENST00000424463 OS9Q13438 667 aaPredicted RBP11.03□□□□□ -0.64
VPS8-204ENST00000424463 PPLO60437 1756 aa11.02□□□□□ -0.64
VPS8-204ENST00000424463 STK26Q9P289 416 aa11.02□□□□□ -0.65
VPS8-204ENST00000424463 ERVK-7P63135 1459 aa11.02□□□□□ -0.65
VPS8-204ENST00000424463 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
VPS8-204ENST00000424463 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
VPS8-204ENST00000424463 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
VPS8-204ENST00000424463 SAFB2Q14151 953 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS8-204ENST00000424463 GPATCH11Q8N954 259 aa11.01□□□□□ -0.65
VPS8-204ENST00000424463 NEXMIFQ5QGS0 1516 aa11.01□□□□□ -0.65
VPS8-204ENST00000424463 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
VPS8-204ENST00000424463 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
VPS8-204ENST00000424463 ADGRB1O14514 1584 aa11□□□□□ -0.65
VPS8-204ENST00000424463 AGLP35573 1532 aa11□□□□□ -0.65
VPS8-204ENST00000424463 PREX1Q8TCU6 1659 aa11□□□□□ -0.65
VPS8-204ENST00000424463 SOX12O15370 315 aa10.99□□□□□ -0.65
VPS8-204ENST00000424463 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
VPS8-204ENST00000424463 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
VPS8-204ENST00000424463 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
VPS8-204ENST00000424463 VGLL3A8MV65 326 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms