RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 ZNF335Q9H4Z2 1342 aaPredicted RBP16.54■□□□□ 0.24
POLR1B-205ENST00000424062 POLR3GLQ9BT43 218 aa16.54■□□□□ 0.24
POLR1B-205ENST00000424062 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
POLR1B-205ENST00000424062 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
POLR1B-205ENST00000424062 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
POLR1B-205ENST00000424062 CDK19Q9BWU1 502 aa16.52■□□□□ 0.24
POLR1B-205ENST00000424062 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
POLR1B-205ENST00000424062 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
POLR1B-205ENST00000424062 SRPK2P78362 688 aaKnown RBP16.51■□□□□ 0.23
POLR1B-205ENST00000424062 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
POLR1B-205ENST00000424062 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
POLR1B-205ENST00000424062 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
POLR1B-205ENST00000424062 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
POLR1B-205ENST00000424062 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
POLR1B-205ENST00000424062 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
POLR1B-205ENST00000424062 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
POLR1B-205ENST00000424062 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
POLR1B-205ENST00000424062 CABP2Q9NPB3 220 aa16.48■□□□□ 0.23
POLR1B-205ENST00000424062 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
POLR1B-205ENST00000424062 STRCP1A6NGW2 1772 aa16.47■□□□□ 0.23
POLR1B-205ENST00000424062 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
POLR1B-205ENST00000424062 ATF3P18847 181 aa16.45■□□□□ 0.22
POLR1B-205ENST00000424062 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
POLR1B-205ENST00000424062 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
POLR1B-205ENST00000424062 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
POLR1B-205ENST00000424062 LRRC7Q96NW7 1537 aa16.44■□□□□ 0.22
POLR1B-205ENST00000424062 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
POLR1B-205ENST00000424062 MSH6P52701 1360 aa16.43■□□□□ 0.22
POLR1B-205ENST00000424062 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
POLR1B-205ENST00000424062 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
POLR1B-205ENST00000424062 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
POLR1B-205ENST00000424062 CCDC61Q9Y6R9 512 aa16.42■□□□□ 0.22
POLR1B-205ENST00000424062 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
POLR1B-205ENST00000424062 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
POLR1B-205ENST00000424062 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
POLR1B-205ENST00000424062 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
POLR1B-205ENST00000424062 PANK3Q9H999 370 aa16.38■□□□□ 0.21
POLR1B-205ENST00000424062 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
POLR1B-205ENST00000424062 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
POLR1B-205ENST00000424062 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
POLR1B-205ENST00000424062 TERF2IPQ9NYB0 399 aa16.37■□□□□ 0.21
POLR1B-205ENST00000424062 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
POLR1B-205ENST00000424062 DCCP43146 1447 aa16.36■□□□□ 0.21
POLR1B-205ENST00000424062 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
POLR1B-205ENST00000424062 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
POLR1B-205ENST00000424062 PRR36Q9H6K5 1346 aa16.36■□□□□ 0.21
POLR1B-205ENST00000424062 PLEKHG3A1L390 1219 aa16.35■□□□□ 0.21
POLR1B-205ENST00000424062 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
POLR1B-205ENST00000424062 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
POLR1B-205ENST00000424062 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
POLR1B-205ENST00000424062 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
POLR1B-205ENST00000424062 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
POLR1B-205ENST00000424062 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
POLR1B-205ENST00000424062 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
POLR1B-205ENST00000424062 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
POLR1B-205ENST00000424062 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
POLR1B-205ENST00000424062 ATP7BP35670 1465 aa16.32■□□□□ 0.2
POLR1B-205ENST00000424062 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
POLR1B-205ENST00000424062 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
POLR1B-205ENST00000424062 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 ANKRD36BQ8N2N9 1353 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 ACEP12821 1306 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 TOM1O60784 492 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 CERKQ8TCT0 537 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
POLR1B-205ENST00000424062 RGPD8O14715 1765 aaPredicted RBP16.3■□□□□ 0.2
POLR1B-205ENST00000424062 MST1RQ04912 1400 aa16.29■□□□□ 0.2
POLR1B-205ENST00000424062 PSME1Q06323 249 aa16.29■□□□□ 0.2
POLR1B-205ENST00000424062 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
POLR1B-205ENST00000424062 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
POLR1B-205ENST00000424062 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
POLR1B-205ENST00000424062 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
POLR1B-205ENST00000424062 MYOM1P52179 1685 aa16.27■□□□□ 0.19
POLR1B-205ENST00000424062 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
POLR1B-205ENST00000424062 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
POLR1B-205ENST00000424062 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
POLR1B-205ENST00000424062 UBAP1LF5GYI3 381 aa16.25■□□□□ 0.19
POLR1B-205ENST00000424062 FOXO3O43524 673 aa16.25■□□□□ 0.19
POLR1B-205ENST00000424062 CPSF1Q10570 1443 aaKnown RBP16.25■□□□□ 0.19
POLR1B-205ENST00000424062 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
POLR1B-205ENST00000424062 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
POLR1B-205ENST00000424062 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
POLR1B-205ENST00000424062 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
POLR1B-205ENST00000424062 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
POLR1B-205ENST00000424062 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
POLR1B-205ENST00000424062 ANP32CO43423 234 aa16.23■□□□□ 0.19
POLR1B-205ENST00000424062 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
POLR1B-205ENST00000424062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
POLR1B-205ENST00000424062 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
POLR1B-205ENST00000424062 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
POLR1B-205ENST00000424062 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.19
POLR1B-205ENST00000424062 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
POLR1B-205ENST00000424062 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
POLR1B-205ENST00000424062 KIF1AQ12756 1690 aa16.21■□□□□ 0.18
POLR1B-205ENST00000424062 TTC21BQ7Z4L5 1316 aa16.2■□□□□ 0.18
POLR1B-205ENST00000424062 PIP4K2BP78356 416 aa16.2■□□□□ 0.18
POLR1B-205ENST00000424062 AMER1Q5JTC6 1135 aaPredicted RBP16.2■□□□□ 0.18
POLR1B-205ENST00000424062 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
POLR1B-205ENST00000424062 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
POLR1B-205ENST00000424062 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms