RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
CHD7-201ENST00000423902 CWC22Q9HCG8 908 aaKnown RBP10.5□□□□□ -0.73
CHD7-201ENST00000423902 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
CHD7-201ENST00000423902 CTDP1Q9Y5B0 961 aaPredicted RBP10.49□□□□□ -0.73
CHD7-201ENST00000423902 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
CHD7-201ENST00000423902 NEO1Q92859 1461 aa10.49□□□□□ -0.73
CHD7-201ENST00000423902 CCDC146Q8IYE0 955 aa10.49□□□□□ -0.73
CHD7-201ENST00000423902 GPATCH8Q9UKJ3 1502 aaKnown RBP10.49□□□□□ -0.73
CHD7-201ENST00000423902 ZFYVE16Q7Z3T8 1539 aa10.48□□□□□ -0.73
CHD7-201ENST00000423902 ZCCHC11Q5TAX3 1644 aaKnown RBP10.48□□□□□ -0.73
CHD7-201ENST00000423902 CABP4P57796 275 aa10.48□□□□□ -0.73
CHD7-201ENST00000423902 TSPYL4Q9UJ04 414 aa10.48□□□□□ -0.73
CHD7-201ENST00000423902 KDM6BO15054 1643 aa10.48□□□□□ -0.73
CHD7-201ENST00000423902 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
CHD7-201ENST00000423902 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
CHD7-201ENST00000423902 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
CHD7-201ENST00000423902 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
CHD7-201ENST00000423902 FBXO31Q5XUX0 539 aaPredicted RBP10.46□□□□□ -0.73
CHD7-201ENST00000423902 APBB1O00213 710 aa10.46□□□□□ -0.73
CHD7-201ENST00000423902 CABP1Q9NZU7 370 aa10.46□□□□□ -0.73
CHD7-201ENST00000423902 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.74
CHD7-201ENST00000423902 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.74
CHD7-201ENST00000423902 NUP153P49790 1475 aaKnown RBP10.45□□□□□ -0.74
CHD7-201ENST00000423902 RIPK4P57078 832 aa10.45□□□□□ -0.74
CHD7-201ENST00000423902 NUDT16Q96DE0 195 aaKnown RBP10.45□□□□□ -0.74
CHD7-201ENST00000423902 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
CHD7-201ENST00000423902 MTHFSP49914 203 aa10.45□□□□□ -0.74
CHD7-201ENST00000423902 CLSTN1O94985 981 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
CHD7-201ENST00000423902 IDI1Q13907 227 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 ANP32EQ9BTT0 268 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 GNAI1P63096 354 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 XPCQ01831 940 aaPredicted RBP10.44□□□□□ -0.74
CHD7-201ENST00000423902 NPHP3Q7Z494 1330 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 GGNBP2Q9H3C7 697 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
CHD7-201ENST00000423902 ZNF652Q9Y2D9 606 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 ABCC5O15440 1437 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 RUNDC1Q96C34 613 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 E9PSI1 815 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 RCAN3Q9UKA8 241 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 EIF2AK4Q9P2K8 1649 aaKnown RBP10.43□□□□□ -0.74
CHD7-201ENST00000423902 ZMYM3Q14202 1370 aa10.43□□□□□ -0.74
CHD7-201ENST00000423902 HMOX1P09601 288 aa10.42□□□□□ -0.74
CHD7-201ENST00000423902 STARD3NLO95772 234 aa10.42□□□□□ -0.74
CHD7-201ENST00000423902 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
CHD7-201ENST00000423902 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
CHD7-201ENST00000423902 ZPR1O75312 459 aa10.42□□□□□ -0.74
CHD7-201ENST00000423902 KRT28Q7Z3Y7 464 aa10.42□□□□□ -0.74
CHD7-201ENST00000423902 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
CHD7-201ENST00000423902 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
CHD7-201ENST00000423902 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
CHD7-201ENST00000423902 CCDC34Q96HJ3 373 aa10.41□□□□□ -0.74
CHD7-201ENST00000423902 RGS3P49796 1198 aa10.4□□□□□ -0.74
CHD7-201ENST00000423902 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.74
CHD7-201ENST00000423902 FOXO3O43524 673 aa10.4□□□□□ -0.74
CHD7-201ENST00000423902 RIMS2Q9UQ26 1411 aa10.4□□□□□ -0.74
CHD7-201ENST00000423902 EXOC5O00471 708 aa10.4□□□□□ -0.74
CHD7-201ENST00000423902 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
CHD7-201ENST00000423902 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
CHD7-201ENST00000423902 LRRC59Q96AG4 307 aaKnown RBP10.4□□□□□ -0.74
CHD7-201ENST00000423902 G3BP1Q13283 466 aaKnown RBP eCLIP10.4□□□□□ -0.753e-6■■□□□ 12.2
CHD7-201ENST00000423902 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.75
CHD7-201ENST00000423902 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
CHD7-201ENST00000423902 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 TMOD3Q9NYL9 352 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 NCKAP5LQ9HCH0 1330 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
CHD7-201ENST00000423902 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 C8orf37Q96NL8 207 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 C19orf44Q9H6X5 657 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
CHD7-201ENST00000423902 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
CHD7-201ENST00000423902 GNL3LQ9NVN8 582 aaKnown RBP10.38□□□□□ -0.75
CHD7-201ENST00000423902 NINLQ9Y2I6 1382 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 CCAR1Q8IX12 1150 aaKnown RBP10.38□□□□□ -0.75
CHD7-201ENST00000423902 WAPLQ7Z5K2 1190 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 HECW2Q9P2P5 1572 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 AMOTQ4VCS5 1084 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 AIMP1Q12904 312 aaKnown RBP10.38□□□□□ -0.75
CHD7-201ENST00000423902 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 MAPKBP1O60336 1514 aa10.38□□□□□ -0.75
CHD7-201ENST00000423902 HSPA2P54652 639 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 MAST1Q9Y2H9 1570 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 SHANK2Q9UPX8 1470 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 WDHD1O75717 1129 aaPredicted RBP10.37□□□□□ -0.75
CHD7-201ENST00000423902 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
CHD7-201ENST00000423902 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
CHD7-201ENST00000423902 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
CHD7-201ENST00000423902 AKAP17AQ02040 695 aaKnown RBP10.36□□□□□ -0.75
CHD7-201ENST00000423902 DISP1Q96F81 1524 aa10.36□□□□□ -0.75
CHD7-201ENST00000423902 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
CHD7-201ENST00000423902 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
CHD7-201ENST00000423902 NAIPQ13075 1403 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms