RNA–Protein interactions for RNA: ENST00000423693.5

HDLBP-210, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-210ENST00000423693 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.46■□□□□ 0.55
HDLBP-210ENST00000423693 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
HDLBP-210ENST00000423693 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
HDLBP-210ENST00000423693 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
HDLBP-210ENST00000423693 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
HDLBP-210ENST00000423693 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
HDLBP-210ENST00000423693 NALCNQ8IZF0 1738 aa18.42■□□□□ 0.54
HDLBP-210ENST00000423693 CDC42BPGQ6DT37 1551 aa18.4■□□□□ 0.54
HDLBP-210ENST00000423693 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
HDLBP-210ENST00000423693 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
HDLBP-210ENST00000423693 ARHGEF28Q8N1W1 1705 aaKnown RBP18.39■□□□□ 0.53
HDLBP-210ENST00000423693 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.53
HDLBP-210ENST00000423693 MST1RQ04912 1400 aa18.39■□□□□ 0.53
HDLBP-210ENST00000423693 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDLBP-210ENST00000423693 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
HDLBP-210ENST00000423693 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
HDLBP-210ENST00000423693 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
HDLBP-210ENST00000423693 MINK1Q8N4C8 1332 aaPredicted RBP18.35■□□□□ 0.53
HDLBP-210ENST00000423693 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
HDLBP-210ENST00000423693 BRINP3Q76B58 766 aa18.33■□□□□ 0.52
HDLBP-210ENST00000423693 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
HDLBP-210ENST00000423693 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-210ENST00000423693 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
HDLBP-210ENST00000423693 ANKARQ7Z5J8 1434 aa18.31■□□□□ 0.52
HDLBP-210ENST00000423693 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
HDLBP-210ENST00000423693 HSPA1LP34931 641 aa18.3■□□□□ 0.52
HDLBP-210ENST00000423693 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
HDLBP-210ENST00000423693 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
HDLBP-210ENST00000423693 ORAI2Q96SN7 254 aa18.28■□□□□ 0.52
HDLBP-210ENST00000423693 CDK19Q9BWU1 502 aa18.28■□□□□ 0.52
HDLBP-210ENST00000423693 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.51
HDLBP-210ENST00000423693 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
HDLBP-210ENST00000423693 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
HDLBP-210ENST00000423693 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
HDLBP-210ENST00000423693 AHDC1Q5TGY3 1603 aaPredicted RBP18.26■□□□□ 0.51
HDLBP-210ENST00000423693 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
HDLBP-210ENST00000423693 PHF8Q9UPP1 1060 aa18.24■□□□□ 0.51
HDLBP-210ENST00000423693 USP47Q96K76 1375 aa18.24■□□□□ 0.51
HDLBP-210ENST00000423693 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
HDLBP-210ENST00000423693 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
HDLBP-210ENST00000423693 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
HDLBP-210ENST00000423693 CCDC61Q9Y6R9 512 aa18.23■□□□□ 0.51
HDLBP-210ENST00000423693 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
HDLBP-210ENST00000423693 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
HDLBP-210ENST00000423693 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
HDLBP-210ENST00000423693 NHSL1Q5SYE7 1610 aa18.21■□□□□ 0.51
HDLBP-210ENST00000423693 USP32Q8NFA0 1604 aa18.21■□□□□ 0.51
HDLBP-210ENST00000423693 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
HDLBP-210ENST00000423693 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
HDLBP-210ENST00000423693 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
HDLBP-210ENST00000423693 ATP7BP35670 1465 aa18.2■□□□□ 0.5
HDLBP-210ENST00000423693 FOXO3O43524 673 aa18.2■□□□□ 0.5
HDLBP-210ENST00000423693 TESK2Q96S53 571 aa18.2■□□□□ 0.5
HDLBP-210ENST00000423693 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
HDLBP-210ENST00000423693 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
HDLBP-210ENST00000423693 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
HDLBP-210ENST00000423693 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
HDLBP-210ENST00000423693 JCADQ9P266 1359 aa18.17■□□□□ 0.5
HDLBP-210ENST00000423693 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
HDLBP-210ENST00000423693 PSME1Q06323 249 aa18.17■□□□□ 0.5
HDLBP-210ENST00000423693 ITSN1Q15811 1721 aa18.17■□□□□ 0.5
HDLBP-210ENST00000423693 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
HDLBP-210ENST00000423693 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
HDLBP-210ENST00000423693 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
HDLBP-210ENST00000423693 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
HDLBP-210ENST00000423693 TMF1P82094 1093 aa18.15■□□□□ 0.5
HDLBP-210ENST00000423693 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
HDLBP-210ENST00000423693 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
HDLBP-210ENST00000423693 PXDNQ92626 1479 aa18.14■□□□□ 0.5
HDLBP-210ENST00000423693 POLR3AO14802 1390 aaPredicted RBP18.14■□□□□ 0.49
HDLBP-210ENST00000423693 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
HDLBP-210ENST00000423693 TOPAZ1Q8N9V7 1692 aa18.13■□□□□ 0.49
HDLBP-210ENST00000423693 SBNO1A3KN83 1393 aa18.13■□□□□ 0.49
HDLBP-210ENST00000423693 CABP1Q9NZU7 370 aa18.12■□□□□ 0.49
HDLBP-210ENST00000423693 SPATA31A6Q5VVP1 1343 aa18.12■□□□□ 0.49
HDLBP-210ENST00000423693 ACEP12821 1306 aa18.11■□□□□ 0.49
HDLBP-210ENST00000423693 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
HDLBP-210ENST00000423693 NINLQ9Y2I6 1382 aa18.1■□□□□ 0.49
HDLBP-210ENST00000423693 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
HDLBP-210ENST00000423693 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
HDLBP-210ENST00000423693 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
HDLBP-210ENST00000423693 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
HDLBP-210ENST00000423693 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
HDLBP-210ENST00000423693 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.49
HDLBP-210ENST00000423693 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
HDLBP-210ENST00000423693 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
HDLBP-210ENST00000423693 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
HDLBP-210ENST00000423693 ARHGEF10O15013 1369 aa18.06■□□□□ 0.48
HDLBP-210ENST00000423693 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
HDLBP-210ENST00000423693 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
HDLBP-210ENST00000423693 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
HDLBP-210ENST00000423693 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
HDLBP-210ENST00000423693 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
HDLBP-210ENST00000423693 SLC12A5Q9H2X9 1139 aa18.03■□□□□ 0.48
HDLBP-210ENST00000423693 USP6P35125 1406 aa18.03■□□□□ 0.48
HDLBP-210ENST00000423693 TRPM3Q9HCF6 1732 aaPredicted RBP18.03■□□□□ 0.48
HDLBP-210ENST00000423693 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
HDLBP-210ENST00000423693 SSH2Q76I76 1423 aa18■□□□□ 0.47
HDLBP-210ENST00000423693 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
HDLBP-210ENST00000423693 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms