RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 YTHDC2Q9H6S0 1430 aaKnown RBP15.84■□□□□ 0.13
USP49-204ENST00000423567 LAMC1P11047 1609 aa15.83■□□□□ 0.13
USP49-204ENST00000423567 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.13
USP49-204ENST00000423567 TECPR2O15040 1411 aa15.83■□□□□ 0.12
USP49-204ENST00000423567 CAPN15O75808 1086 aa15.81■□□□□ 0.12
USP49-204ENST00000423567 ASXL1Q8IXJ9 1541 aa15.81■□□□□ 0.12
USP49-204ENST00000423567 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
USP49-204ENST00000423567 DISP3Q9P2K9 1392 aa15.8■□□□□ 0.12
USP49-204ENST00000423567 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
USP49-204ENST00000423567 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
USP49-204ENST00000423567 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
USP49-204ENST00000423567 MST1RQ04912 1400 aa15.79■□□□□ 0.12
USP49-204ENST00000423567 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
USP49-204ENST00000423567 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
USP49-204ENST00000423567 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
USP49-204ENST00000423567 BRINP3Q76B58 766 aa15.78■□□□□ 0.12
USP49-204ENST00000423567 SIN3AQ96ST3 1273 aa15.78■□□□□ 0.12
USP49-204ENST00000423567 POGKQ9P215 609 aa15.78■□□□□ 0.12
USP49-204ENST00000423567 KNDC1Q76NI1 1749 aa15.77■□□□□ 0.11
USP49-204ENST00000423567 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
USP49-204ENST00000423567 PLEKHH1Q9ULM0 1364 aa15.75■□□□□ 0.11
USP49-204ENST00000423567 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
USP49-204ENST00000423567 C1orf167Q5SNV9 1468 aa15.75■□□□□ 0.11
USP49-204ENST00000423567 ADGRB1O14514 1584 aa15.75■□□□□ 0.11
USP49-204ENST00000423567 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP49-204ENST00000423567 L3MBTL2Q969R5 705 aa15.74■□□□□ 0.11
USP49-204ENST00000423567 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
USP49-204ENST00000423567 JCADQ9P266 1359 aa15.74■□□□□ 0.11
USP49-204ENST00000423567 DLC1Q96QB1 1528 aa15.73■□□□□ 0.11
USP49-204ENST00000423567 PHLPP1O60346 1717 aa15.73■□□□□ 0.11
USP49-204ENST00000423567 AHDC1Q5TGY3 1603 aaPredicted RBP15.72■□□□□ 0.11
USP49-204ENST00000423567 ESCO1Q5FWF5 840 aa15.72■□□□□ 0.11
USP49-204ENST00000423567 ORAI2Q96SN7 254 aa15.71■□□□□ 0.11
USP49-204ENST00000423567 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
USP49-204ENST00000423567 NUTM2FA1L443 756 aa15.7■□□□□ 0.1
USP49-204ENST00000423567 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
USP49-204ENST00000423567 ZBTB22O15209 634 aa15.69■□□□□ 0.1
USP49-204ENST00000423567 LRRC59Q96AG4 307 aaKnown RBP15.69■□□□□ 0.1
USP49-204ENST00000423567 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
USP49-204ENST00000423567 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
USP49-204ENST00000423567 DSG3P32926 999 aa15.67■□□□□ 0.1
USP49-204ENST00000423567 SPATA31A6Q5VVP1 1343 aa15.67■□□□□ 0.1
USP49-204ENST00000423567 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
USP49-204ENST00000423567 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
USP49-204ENST00000423567 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
USP49-204ENST00000423567 EIF3AQ14152 1382 aaKnown RBP15.66■□□□□ 0.1
USP49-204ENST00000423567 NBPF1Q3BBV0 1214 aa15.66■□□□□ 0.1
USP49-204ENST00000423567 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
USP49-204ENST00000423567 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
USP49-204ENST00000423567 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
USP49-204ENST00000423567 SOS2Q07890 1332 aaPredicted RBP15.64■□□□□ 0.09
USP49-204ENST00000423567 FMN2Q9NZ56 1722 aa15.63■□□□□ 0.09
USP49-204ENST00000423567 FOXO3O43524 673 aa15.63■□□□□ 0.09
USP49-204ENST00000423567 MEX3CQ5U5Q3 659 aaKnown RBP15.63■□□□□ 0.09
USP49-204ENST00000423567 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
USP49-204ENST00000423567 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
USP49-204ENST00000423567 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
USP49-204ENST00000423567 ANKARQ7Z5J8 1434 aa15.62■□□□□ 0.09
USP49-204ENST00000423567 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
USP49-204ENST00000423567 PHF8Q9UPP1 1060 aa15.62■□□□□ 0.09
USP49-204ENST00000423567 NUTM2BA6NNL0 878 aaPredicted RBP15.61■□□□□ 0.09
USP49-204ENST00000423567 NUTM2EB1AL46 878 aaPredicted RBP15.61■□□□□ 0.09
USP49-204ENST00000423567 NUTM2AQ8IVF1 878 aaPredicted RBP15.61■□□□□ 0.09
USP49-204ENST00000423567 CENPJQ9HC77 1338 aaPredicted RBP15.61■□□□□ 0.09
USP49-204ENST00000423567 SHPRHQ149N8 1683 aa15.6■□□□□ 0.09
USP49-204ENST00000423567 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
USP49-204ENST00000423567 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
USP49-204ENST00000423567 XPCQ01831 940 aaPredicted RBP15.59■□□□□ 0.09
USP49-204ENST00000423567 PSME1Q06323 249 aa15.59■□□□□ 0.09
USP49-204ENST00000423567 KIF1AQ12756 1690 aa15.58■□□□□ 0.08
USP49-204ENST00000423567 NBPF8Q3BBV2 869 aa15.58■□□□□ 0.08
USP49-204ENST00000423567 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
USP49-204ENST00000423567 TULP4Q9NRJ4 1543 aa15.58■□□□□ 0.08
USP49-204ENST00000423567 ILDR2Q71H61 639 aa15.57■□□□□ 0.08
USP49-204ENST00000423567 KRT28Q7Z3Y7 464 aa15.57■□□□□ 0.08
USP49-204ENST00000423567 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
USP49-204ENST00000423567 CDK19Q9BWU1 502 aa15.57■□□□□ 0.08
USP49-204ENST00000423567 TRPM1Q7Z4N2 1603 aa15.57■□□□□ 0.08
USP49-204ENST00000423567 PXDNQ92626 1479 aa15.56■□□□□ 0.08
USP49-204ENST00000423567 LRP6O75581 1613 aa15.55■□□□□ 0.08
USP49-204ENST00000423567 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
USP49-204ENST00000423567 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
USP49-204ENST00000423567 CARD11Q9BXL7 1154 aa15.55■□□□□ 0.08
USP49-204ENST00000423567 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
USP49-204ENST00000423567 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
USP49-204ENST00000423567 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
USP49-204ENST00000423567 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
USP49-204ENST00000423567 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
USP49-204ENST00000423567 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.08
USP49-204ENST00000423567 LMOD2Q6P5Q4 547 aa15.52■□□□□ 0.08
USP49-204ENST00000423567 RGS17Q9UGC6 210 aaPredicted RBP15.52■□□□□ 0.08
USP49-204ENST00000423567 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
USP49-204ENST00000423567 CCDC61Q9Y6R9 512 aa15.52■□□□□ 0.08
USP49-204ENST00000423567 USP32Q8NFA0 1604 aa15.52■□□□□ 0.08
USP49-204ENST00000423567 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
USP49-204ENST00000423567 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
USP49-204ENST00000423567 EVC2Q86UK5 1308 aa15.51■□□□□ 0.07
USP49-204ENST00000423567 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
USP49-204ENST00000423567 C8orf37Q96NL8 207 aa15.51■□□□□ 0.07
USP49-204ENST00000423567 ATP7BP35670 1465 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms