RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FMN2Q9NZ56 1722 aa24.05■■□□□ 1.44
COL18A1-205ENST00000423214 TECPR2O15040 1411 aa24.04■■□□□ 1.44
COL18A1-205ENST00000423214 C8orf37Q96NL8 207 aa24.04■■□□□ 1.44
COL18A1-205ENST00000423214 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
COL18A1-205ENST00000423214 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
COL18A1-205ENST00000423214 KIF1AQ12756 1690 aa24.03■■□□□ 1.44
COL18A1-205ENST00000423214 SOS2Q07890 1332 aaPredicted RBP24.01■■□□□ 1.43
COL18A1-205ENST00000423214 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
COL18A1-205ENST00000423214 LRPPRCP42704 1394 aaKnown RBP24.01■■□□□ 1.43
COL18A1-205ENST00000423214 RGPD8O14715 1765 aaPredicted RBP24■■□□□ 1.43
COL18A1-205ENST00000423214 STK26Q9P289 416 aa23.99■■□□□ 1.43
COL18A1-205ENST00000423214 ADAMTS2O95450 1211 aa23.98■■□□□ 1.43
COL18A1-205ENST00000423214 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
COL18A1-205ENST00000423214 RGS12O14924 1447 aa23.97■■□□□ 1.43
COL18A1-205ENST00000423214 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
COL18A1-205ENST00000423214 PXDNQ92626 1479 aa23.97■■□□□ 1.43
COL18A1-205ENST00000423214 MYOM2P54296 1465 aa23.96■■□□□ 1.43
COL18A1-205ENST00000423214 YTHDC2Q9H6S0 1430 aaKnown RBP23.96■■□□□ 1.43
COL18A1-205ENST00000423214 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
COL18A1-205ENST00000423214 NGLY1Q96IV0 654 aa23.95■■□□□ 1.42
COL18A1-205ENST00000423214 UPF1Q92900 1129 aaKnown RBP eCLIP23.94■■□□□ 1.42
COL18A1-205ENST00000423214 RBM6P78332 1123 aaKnown RBP23.93■■□□□ 1.42
COL18A1-205ENST00000423214 TMEM132EQ6IEE7 984 aa23.93■■□□□ 1.42
COL18A1-205ENST00000423214 WAPLQ7Z5K2 1190 aa23.93■■□□□ 1.42
COL18A1-205ENST00000423214 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
COL18A1-205ENST00000423214 PLEKHH1Q9ULM0 1364 aa23.92■■□□□ 1.42
COL18A1-205ENST00000423214 NRXN1Q9ULB1 1477 aa23.92■■□□□ 1.42
COL18A1-205ENST00000423214 NUTM2FA1L443 756 aa23.91■■□□□ 1.42
COL18A1-205ENST00000423214 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.9■■□□□ 1.42
COL18A1-205ENST00000423214 RAB3GAP2Q9H2M9 1393 aa23.9■■□□□ 1.42
COL18A1-205ENST00000423214 FOXO3O43524 673 aa23.87■■□□□ 1.41
COL18A1-205ENST00000423214 XPCQ01831 940 aaPredicted RBP23.87■■□□□ 1.41
COL18A1-205ENST00000423214 USP21Q9UK80 565 aa23.87■■□□□ 1.41
COL18A1-205ENST00000423214 ABCA3Q99758 1704 aa23.86■■□□□ 1.41
COL18A1-205ENST00000423214 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
COL18A1-205ENST00000423214 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
COL18A1-205ENST00000423214 TRPC5Q9UL62 973 aaPredicted RBP23.84■■□□□ 1.41
COL18A1-205ENST00000423214 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
COL18A1-205ENST00000423214 ATRNO75882 1429 aa23.84■■□□□ 1.41
COL18A1-205ENST00000423214 ADGRB2O60241 1585 aa23.83■■□□□ 1.41
COL18A1-205ENST00000423214 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
COL18A1-205ENST00000423214 CFAP70Q5T0N1 1121 aa23.81■■□□□ 1.4
COL18A1-205ENST00000423214 FNBP4Q8N3X1 1017 aaPredicted RBP23.81■■□□□ 1.4
COL18A1-205ENST00000423214 PLCH1Q4KWH8 1693 aa23.8■■□□□ 1.4
COL18A1-205ENST00000423214 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
COL18A1-205ENST00000423214 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
COL18A1-205ENST00000423214 ADGRB1O14514 1584 aa23.78■■□□□ 1.4
COL18A1-205ENST00000423214 TNS3Q68CZ2 1445 aa23.77■■□□□ 1.4
COL18A1-205ENST00000423214 NWD2Q9ULI1 1742 aa23.77■■□□□ 1.4
COL18A1-205ENST00000423214 SAFB2Q14151 953 aaKnown RBP eCLIP23.77■■□□□ 1.4
COL18A1-205ENST00000423214 SPATA31A3Q5VYP0 1347 aa23.77■■□□□ 1.4
COL18A1-205ENST00000423214 BCL9LQ86UU0 1499 aa23.76■■□□□ 1.39
COL18A1-205ENST00000423214 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
COL18A1-205ENST00000423214 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
COL18A1-205ENST00000423214 ITSN1Q15811 1721 aa23.75■■□□□ 1.39
COL18A1-205ENST00000423214 ANKARQ7Z5J8 1434 aa23.75■■□□□ 1.39
COL18A1-205ENST00000423214 KRT28Q7Z3Y7 464 aa23.74■■□□□ 1.39
COL18A1-205ENST00000423214 POGKQ9P215 609 aa23.74■■□□□ 1.39
COL18A1-205ENST00000423214 PHF8Q9UPP1 1060 aa23.74■■□□□ 1.39
COL18A1-205ENST00000423214 BRWD3Q6RI45 1802 aa23.73■■□□□ 1.39
COL18A1-205ENST00000423214 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
COL18A1-205ENST00000423214 TRPM3Q9HCF6 1732 aaPredicted RBP23.73■■□□□ 1.39
COL18A1-205ENST00000423214 EP400Q96L91 3159 aa23.71■■□□□ 1.39
COL18A1-205ENST00000423214 GLI3P10071 1580 aa23.71■■□□□ 1.39
COL18A1-205ENST00000423214 SLIT2O94813 1529 aa23.71■■□□□ 1.39
COL18A1-205ENST00000423214 PSME1Q06323 249 aa23.71■■□□□ 1.39
COL18A1-205ENST00000423214 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
COL18A1-205ENST00000423214 ALS2Q96Q42 1657 aa23.7■■□□□ 1.38
COL18A1-205ENST00000423214 TULP4Q9NRJ4 1543 aa23.69■■□□□ 1.38
COL18A1-205ENST00000423214 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
COL18A1-205ENST00000423214 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
COL18A1-205ENST00000423214 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
COL18A1-205ENST00000423214 TRAK1Q9UPV9 953 aa23.67■■□□□ 1.38
COL18A1-205ENST00000423214 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
COL18A1-205ENST00000423214 RALGAPBQ86X10 1494 aa23.67■■□□□ 1.38
COL18A1-205ENST00000423214 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
COL18A1-205ENST00000423214 GJD4Q96KN9 370 aaPredicted RBP23.66■■□□□ 1.38
COL18A1-205ENST00000423214 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
COL18A1-205ENST00000423214 UNC5CLQ8IV45 518 aa23.65■■□□□ 1.38
COL18A1-205ENST00000423214 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
COL18A1-205ENST00000423214 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
COL18A1-205ENST00000423214 MINK1Q8N4C8 1332 aaPredicted RBP23.64■■□□□ 1.38
COL18A1-205ENST00000423214 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
COL18A1-205ENST00000423214 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
COL18A1-205ENST00000423214 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
COL18A1-205ENST00000423214 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
COL18A1-205ENST00000423214 COL14A1Q05707 1796 aaKnown RBP23.62■■□□□ 1.37
COL18A1-205ENST00000423214 CABLES1Q8TDN4 633 aa23.61■■□□□ 1.37
COL18A1-205ENST00000423214 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
COL18A1-205ENST00000423214 HRCP23327 699 aa23.59■■□□□ 1.37
COL18A1-205ENST00000423214 TOPAZ1Q8N9V7 1692 aa23.59■■□□□ 1.37
COL18A1-205ENST00000423214 CCDC9Q9Y3X0 531 aaKnown RBP23.57■■□□□ 1.36
COL18A1-205ENST00000423214 PHRF1Q9P1Y6 1649 aaKnown RBP23.56■■□□□ 1.36
COL18A1-205ENST00000423214 PRR36Q9H6K5 1346 aa23.56■■□□□ 1.36
COL18A1-205ENST00000423214 ATP7BP35670 1465 aa23.56■■□□□ 1.36
COL18A1-205ENST00000423214 WASLO00401 505 aaPredicted RBP23.55■■□□□ 1.36
COL18A1-205ENST00000423214 VPS72Q15906 364 aa23.54■■□□□ 1.36
COL18A1-205ENST00000423214 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
COL18A1-205ENST00000423214 NGDNQ8NEJ9 315 aaKnown RBP23.52■■□□□ 1.36
COL18A1-205ENST00000423214 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms