RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 ATF3P18847 181 aa11.88□□□□□ -0.51
HLA-DQA1-204ENST00000422863 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQA1-204ENST00000422863 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
HLA-DQA1-204ENST00000422863 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
HLA-DQA1-204ENST00000422863 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
HLA-DQA1-204ENST00000422863 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
HLA-DQA1-204ENST00000422863 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-204ENST00000422863 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
HLA-DQA1-204ENST00000422863 RGS12O14924 1447 aa11.86□□□□□ -0.51
HLA-DQA1-204ENST00000422863 ABCC5O15440 1437 aa11.86□□□□□ -0.51
HLA-DQA1-204ENST00000422863 CDK12Q9NYV4 1490 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 BRINP3Q76B58 766 aa11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 C19orf44Q9H6X5 657 aa11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 NOS1P29475 1434 aa11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
HLA-DQA1-204ENST00000422863 PLEKHG1Q9ULL1 1385 aa11.84□□□□□ -0.51
HLA-DQA1-204ENST00000422863 PTPN23Q9H3S7 1636 aa11.84□□□□□ -0.51
HLA-DQA1-204ENST00000422863 ZFYVE9O95405 1425 aa11.84□□□□□ -0.51
HLA-DQA1-204ENST00000422863 TMEM131LA2VDJ0 1609 aa11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 LMTK2Q8IWU2 1503 aa11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 SLC52A1Q9NWF4 448 aa11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
HLA-DQA1-204ENST00000422863 NHSL1Q5SYE7 1610 aa11.82□□□□□ -0.52
HLA-DQA1-204ENST00000422863 SETBP1Q9Y6X0 1596 aa11.81□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
HLA-DQA1-204ENST00000422863 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-204ENST00000422863 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
HLA-DQA1-204ENST00000422863 DAPK1P53355 1430 aa11.8□□□□□ -0.52
HLA-DQA1-204ENST00000422863 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
HLA-DQA1-204ENST00000422863 NGLY1Q96IV0 654 aa11.8□□□□□ -0.52
HLA-DQA1-204ENST00000422863 EP400Q96L91 3159 aa11.79□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ADAMTS13Q76LX8 1427 aa11.79□□□□□ -0.52
HLA-DQA1-204ENST00000422863 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ASXL1Q8IXJ9 1541 aa11.79□□□□□ -0.52
HLA-DQA1-204ENST00000422863 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
HLA-DQA1-204ENST00000422863 LRRC59Q96AG4 307 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-204ENST00000422863 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
HLA-DQA1-204ENST00000422863 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.77□□□□□ -0.53
HLA-DQA1-204ENST00000422863 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.53
HLA-DQA1-204ENST00000422863 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.53
HLA-DQA1-204ENST00000422863 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
HLA-DQA1-204ENST00000422863 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
HLA-DQA1-204ENST00000422863 E9PCH4 1651 aa11.75□□□□□ -0.53
HLA-DQA1-204ENST00000422863 USP21Q9UK80 565 aa11.75□□□□□ -0.53
HLA-DQA1-204ENST00000422863 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
HLA-DQA1-204ENST00000422863 MST1RQ04912 1400 aa11.75□□□□□ -0.53
HLA-DQA1-204ENST00000422863 TRPM2O94759 1503 aa11.75□□□□□ -0.53
HLA-DQA1-204ENST00000422863 UNC13BO14795 1591 aa11.74□□□□□ -0.53
HLA-DQA1-204ENST00000422863 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
HLA-DQA1-204ENST00000422863 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
HLA-DQA1-204ENST00000422863 XRN1Q8IZH2 1706 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-204ENST00000422863 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
HLA-DQA1-204ENST00000422863 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-204ENST00000422863 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
HLA-DQA1-204ENST00000422863 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
HLA-DQA1-204ENST00000422863 TRPC5Q9UL62 973 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQA1-204ENST00000422863 MARF1Q9Y4F3 1742 aaKnown RBP11.71□□□□□ -0.54
HLA-DQA1-204ENST00000422863 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-204ENST00000422863 DCCP43146 1447 aa11.69□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
HLA-DQA1-204ENST00000422863 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ORAI2Q96SN7 254 aa11.68□□□□□ -0.54
HLA-DQA1-204ENST00000422863 METP08581 1390 aa11.67□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQA1-204ENST00000422863 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
HLA-DQA1-204ENST00000422863 FNBP4Q8N3X1 1017 aaPredicted RBP11.67□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ATRNO75882 1429 aa11.67□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ADGRL2O95490 1459 aa11.66□□□□□ -0.54
HLA-DQA1-204ENST00000422863 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ZNF326Q5BKZ1 582 aaKnown RBP11.66□□□□□ -0.54
HLA-DQA1-204ENST00000422863 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
HLA-DQA1-204ENST00000422863 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
HLA-DQA1-204ENST00000422863 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
HLA-DQA1-204ENST00000422863 LAMC1P11047 1609 aa11.64□□□□□ -0.55
HLA-DQA1-204ENST00000422863 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQA1-204ENST00000422863 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQA1-204ENST00000422863 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
HLA-DQA1-204ENST00000422863 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 IQGAP3Q86VI3 1631 aa11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 BCL9LQ86UU0 1499 aa11.62□□□□□ -0.55
HLA-DQA1-204ENST00000422863 KIF1BO60333 1816 aa11.61□□□□□ -0.55
HLA-DQA1-204ENST00000422863 GLI3P10071 1580 aa11.6□□□□□ -0.55
HLA-DQA1-204ENST00000422863 NUP155O75694 1391 aa11.59□□□□□ -0.55
HLA-DQA1-204ENST00000422863 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
HLA-DQA1-204ENST00000422863 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
HLA-DQA1-204ENST00000422863 LRP5O75197 1615 aa11.59□□□□□ -0.55
HLA-DQA1-204ENST00000422863 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
HLA-DQA1-204ENST00000422863 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
HLA-DQA1-204ENST00000422863 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
HLA-DQA1-204ENST00000422863 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQA1-204ENST00000422863 FOXO3O43524 673 aa11.57□□□□□ -0.56
HLA-DQA1-204ENST00000422863 MYOM2P54296 1465 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms