RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 ANKRD50Q9ULJ7 1429 aa13.16□□□□□ -0.3
SEMA4D-208ENST00000422704 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
SEMA4D-208ENST00000422704 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
SEMA4D-208ENST00000422704 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
SEMA4D-208ENST00000422704 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-208ENST00000422704 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
SEMA4D-208ENST00000422704 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
SEMA4D-208ENST00000422704 PZPP20742 1482 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 PLCH2O75038 1416 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 CFAP70Q5T0N1 1121 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 ANKRD30BQ9BXX2 1392 aa13.14□□□□□ -0.31
SEMA4D-208ENST00000422704 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 ST18O60284 1047 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 MTHFSP49914 203 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
SEMA4D-208ENST00000422704 CLSTN1O94985 981 aa13.12□□□□□ -0.31
SEMA4D-208ENST00000422704 BCAR3O75815 825 aa13.12□□□□□ -0.31
SEMA4D-208ENST00000422704 COG3Q96JB2 828 aa13.12□□□□□ -0.31
SEMA4D-208ENST00000422704 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
SEMA4D-208ENST00000422704 PDE4CQ08493 712 aa13.11□□□□□ -0.31
SEMA4D-208ENST00000422704 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-208ENST00000422704 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-208ENST00000422704 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
SEMA4D-208ENST00000422704 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
SEMA4D-208ENST00000422704 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-208ENST00000422704 FRAT2O75474 233 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-208ENST00000422704 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
SEMA4D-208ENST00000422704 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-208ENST00000422704 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 ABCC1P33527 1531 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 SYAP1Q96A49 352 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-208ENST00000422704 TEFQ10587 303 aa13.08□□□□□ -0.32
SEMA4D-208ENST00000422704 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
SEMA4D-208ENST00000422704 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
SEMA4D-208ENST00000422704 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 UNC13BO14795 1591 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 ABCA9Q8IUA7 1624 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 DUOX2Q9NRD8 1548 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
SEMA4D-208ENST00000422704 FOSBP53539 338 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 TEX14Q8IWB6 1497 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 MPNDQ8N594 471 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
SEMA4D-208ENST00000422704 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
SEMA4D-208ENST00000422704 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-208ENST00000422704 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-208ENST00000422704 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
SEMA4D-208ENST00000422704 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
SEMA4D-208ENST00000422704 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
SEMA4D-208ENST00000422704 RTEL1-TNFRSF6BF6WH68 1400 aa13.04□□□□□ -0.32
SEMA4D-208ENST00000422704 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
SEMA4D-208ENST00000422704 RASSF8Q8NHQ8 419 aa13.04□□□□□ -0.32
SEMA4D-208ENST00000422704 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 DIAPH3Q9NSV4 1193 aa13.03□□□□□ -0.32
SEMA4D-208ENST00000422704 PPP2R1AP30153 589 aa13.02□□□□□ -0.32
SEMA4D-208ENST00000422704 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.32
SEMA4D-208ENST00000422704 H3BQV1 296 aa13.02□□□□□ -0.32
SEMA4D-208ENST00000422704 IFFO2Q5TF58 517 aa13.02□□□□□ -0.32
SEMA4D-208ENST00000422704 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.32
SEMA4D-208ENST00000422704 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.33
SEMA4D-208ENST00000422704 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-208ENST00000422704 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.33
SEMA4D-208ENST00000422704 ZNF592Q92610 1267 aa13.02□□□□□ -0.33
SEMA4D-208ENST00000422704 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
SEMA4D-208ENST00000422704 ASXL2Q76L83 1435 aa13.01□□□□□ -0.33
SEMA4D-208ENST00000422704 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
SEMA4D-208ENST00000422704 CFAP74Q9C0B2 1584 aa13.01□□□□□ -0.33
SEMA4D-208ENST00000422704 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
SEMA4D-208ENST00000422704 KDM4AO75164 1064 aa13□□□□□ -0.33
SEMA4D-208ENST00000422704 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
SEMA4D-208ENST00000422704 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
SEMA4D-208ENST00000422704 ABCF1Q8NE71 845 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA4D-208ENST00000422704 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
SEMA4D-208ENST00000422704 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
SEMA4D-208ENST00000422704 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
SEMA4D-208ENST00000422704 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms