RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
TRIM43CP-201ENST00000422468 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.47
TRIM43CP-201ENST00000422468 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
TRIM43CP-201ENST00000422468 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
TRIM43CP-201ENST00000422468 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
TRIM43CP-201ENST00000422468 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
TRIM43CP-201ENST00000422468 ADGRF5Q8IZF2 1346 aa12.12□□□□□ -0.47
TRIM43CP-201ENST00000422468 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
TRIM43CP-201ENST00000422468 LRP6O75581 1613 aa12.1□□□□□ -0.47
TRIM43CP-201ENST00000422468 LAMC1P11047 1609 aa12.1□□□□□ -0.47
TRIM43CP-201ENST00000422468 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
TRIM43CP-201ENST00000422468 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
TRIM43CP-201ENST00000422468 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
TRIM43CP-201ENST00000422468 TECPR2O15040 1411 aa12.09□□□□□ -0.47
TRIM43CP-201ENST00000422468 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
TRIM43CP-201ENST00000422468 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 HRCP23327 699 aa12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 MYOM2P54296 1465 aa12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
TRIM43CP-201ENST00000422468 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
TRIM43CP-201ENST00000422468 DDX17Q92841 729 aaKnown RBP12.06□□□□□ -0.48
TRIM43CP-201ENST00000422468 STK26Q9P289 416 aa12.06□□□□□ -0.48
TRIM43CP-201ENST00000422468 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
TRIM43CP-201ENST00000422468 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
TRIM43CP-201ENST00000422468 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
TRIM43CP-201ENST00000422468 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
TRIM43CP-201ENST00000422468 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
TRIM43CP-201ENST00000422468 C14orf93Q9H972 538 aaKnown RBP12.04□□□□□ -0.48
TRIM43CP-201ENST00000422468 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
TRIM43CP-201ENST00000422468 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
TRIM43CP-201ENST00000422468 SIRT1Q96EB6 747 aa12.02□□□□□ -0.49
TRIM43CP-201ENST00000422468 ZNF219Q9P2Y4 722 aaPredicted RBP12.02□□□□□ -0.49
TRIM43CP-201ENST00000422468 PLEKHH1Q9ULM0 1364 aa12.02□□□□□ -0.49
TRIM43CP-201ENST00000422468 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
TRIM43CP-201ENST00000422468 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
TRIM43CP-201ENST00000422468 CAPN15O75808 1086 aa12□□□□□ -0.49
TRIM43CP-201ENST00000422468 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
TRIM43CP-201ENST00000422468 ADGRB1O14514 1584 aa12□□□□□ -0.49
TRIM43CP-201ENST00000422468 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
TRIM43CP-201ENST00000422468 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
TRIM43CP-201ENST00000422468 PXDNQ92626 1479 aa11.99□□□□□ -0.49
TRIM43CP-201ENST00000422468 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
TRIM43CP-201ENST00000422468 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
TRIM43CP-201ENST00000422468 AFF2P51816 1311 aa11.98□□□□□ -0.49
TRIM43CP-201ENST00000422468 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
TRIM43CP-201ENST00000422468 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
TRIM43CP-201ENST00000422468 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
TRIM43CP-201ENST00000422468 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
TRIM43CP-201ENST00000422468 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
TRIM43CP-201ENST00000422468 FOXO3O43524 673 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 RXRBP28702 533 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 FKBP8Q14318 412 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 PRAM1Q96QH2 718 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
TRIM43CP-201ENST00000422468 ADAMTS2O95450 1211 aa11.95□□□□□ -0.5
TRIM43CP-201ENST00000422468 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
TRIM43CP-201ENST00000422468 POGKQ9P215 609 aa11.95□□□□□ -0.5
TRIM43CP-201ENST00000422468 ADGRB2O60241 1585 aa11.95□□□□□ -0.5
TRIM43CP-201ENST00000422468 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
TRIM43CP-201ENST00000422468 XPCQ01831 940 aaPredicted RBP11.94□□□□□ -0.5
TRIM43CP-201ENST00000422468 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
TRIM43CP-201ENST00000422468 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIM43CP-201ENST00000422468 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
TRIM43CP-201ENST00000422468 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
TRIM43CP-201ENST00000422468 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
TRIM43CP-201ENST00000422468 KIAA1210Q9ULL0 1709 aa11.92□□□□□ -0.5
TRIM43CP-201ENST00000422468 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
TRIM43CP-201ENST00000422468 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
TRIM43CP-201ENST00000422468 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
TRIM43CP-201ENST00000422468 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
TRIM43CP-201ENST00000422468 KRT28Q7Z3Y7 464 aa11.91□□□□□ -0.5
TRIM43CP-201ENST00000422468 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.5
TRIM43CP-201ENST00000422468 FNBP4Q8N3X1 1017 aaPredicted RBP11.9□□□□□ -0.5
TRIM43CP-201ENST00000422468 USP21Q9UK80 565 aa11.9□□□□□ -0.5
TRIM43CP-201ENST00000422468 PSME1Q06323 249 aa11.89□□□□□ -0.51
TRIM43CP-201ENST00000422468 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
TRIM43CP-201ENST00000422468 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 RGS12O14924 1447 aa11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 ITSN1Q15811 1721 aa11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.88□□□□□ -0.51
TRIM43CP-201ENST00000422468 ABCA3Q99758 1704 aa11.87□□□□□ -0.51
TRIM43CP-201ENST00000422468 TRPM3Q9HCF6 1732 aaPredicted RBP11.87□□□□□ -0.51
TRIM43CP-201ENST00000422468 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
TRIM43CP-201ENST00000422468 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRIM43CP-201ENST00000422468 ATRNO75882 1429 aa11.86□□□□□ -0.51
TRIM43CP-201ENST00000422468 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms