RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
HPS4-204ENST00000422379 FAM135BQ49AJ0 1406 aa12.48□□□□□ -0.41
HPS4-204ENST00000422379 TMF1P82094 1093 aa12.48□□□□□ -0.41
HPS4-204ENST00000422379 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.47□□□□□ -0.41
HPS4-204ENST00000422379 PIK3R4Q99570 1358 aa12.47□□□□□ -0.41
HPS4-204ENST00000422379 POGKQ9P215 609 aa12.47□□□□□ -0.41
HPS4-204ENST00000422379 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
HPS4-204ENST00000422379 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
HPS4-204ENST00000422379 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
HPS4-204ENST00000422379 SIRT1Q96EB6 747 aa12.46□□□□□ -0.42
HPS4-204ENST00000422379 MYOM1P52179 1685 aa12.45□□□□□ -0.42
HPS4-204ENST00000422379 STRCP1A6NGW2 1772 aa12.45□□□□□ -0.42
HPS4-204ENST00000422379 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
HPS4-204ENST00000422379 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
HPS4-204ENST00000422379 CDK19Q9BWU1 502 aa12.42□□□□□ -0.42
HPS4-204ENST00000422379 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
HPS4-204ENST00000422379 ADGRB2O60241 1585 aa12.41□□□□□ -0.42
HPS4-204ENST00000422379 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
HPS4-204ENST00000422379 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
HPS4-204ENST00000422379 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
HPS4-204ENST00000422379 NALCNQ8IZF0 1738 aa12.4□□□□□ -0.43
HPS4-204ENST00000422379 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
HPS4-204ENST00000422379 PANK3Q9H999 370 aa12.39□□□□□ -0.43
HPS4-204ENST00000422379 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
HPS4-204ENST00000422379 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
HPS4-204ENST00000422379 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
HPS4-204ENST00000422379 CARD14Q9BXL6 1004 aa12.38□□□□□ -0.43
HPS4-204ENST00000422379 ATP7BP35670 1465 aa12.38□□□□□ -0.43
HPS4-204ENST00000422379 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
HPS4-204ENST00000422379 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
HPS4-204ENST00000422379 NKTRP30414 1462 aaKnown RBP12.37□□□□□ -0.43
HPS4-204ENST00000422379 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
HPS4-204ENST00000422379 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
HPS4-204ENST00000422379 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
HPS4-204ENST00000422379 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
HPS4-204ENST00000422379 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
HPS4-204ENST00000422379 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
HPS4-204ENST00000422379 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
HPS4-204ENST00000422379 TMEM94Q12767 1356 aa12.35□□□□□ -0.43
HPS4-204ENST00000422379 NUDT16Q96DE0 195 aaKnown RBP12.35□□□□□ -0.43
HPS4-204ENST00000422379 CABP1Q9NZU7 370 aa12.35□□□□□ -0.43
HPS4-204ENST00000422379 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
HPS4-204ENST00000422379 ATAD2Q6PL18 1390 aa12.34□□□□□ -0.43
HPS4-204ENST00000422379 CDC42BPGQ6DT37 1551 aa12.34□□□□□ -0.43
HPS4-204ENST00000422379 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
HPS4-204ENST00000422379 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
HPS4-204ENST00000422379 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
HPS4-204ENST00000422379 TOPAZ1Q8N9V7 1692 aa12.33□□□□□ -0.44
HPS4-204ENST00000422379 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.44
HPS4-204ENST00000422379 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
HPS4-204ENST00000422379 FMN2Q9NZ56 1722 aa12.32□□□□□ -0.44
HPS4-204ENST00000422379 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
HPS4-204ENST00000422379 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
HPS4-204ENST00000422379 ANKRD36BQ8N2N9 1353 aa12.31□□□□□ -0.44
HPS4-204ENST00000422379 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
HPS4-204ENST00000422379 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
HPS4-204ENST00000422379 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
HPS4-204ENST00000422379 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
HPS4-204ENST00000422379 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
HPS4-204ENST00000422379 NINLQ9Y2I6 1382 aa12.29□□□□□ -0.44
HPS4-204ENST00000422379 CCDC184Q52MB2 194 aa12.29□□□□□ -0.44
HPS4-204ENST00000422379 CC2D1BQ5T0F9 858 aaKnown RBP12.29□□□□□ -0.44
HPS4-204ENST00000422379 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
HPS4-204ENST00000422379 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
HPS4-204ENST00000422379 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
HPS4-204ENST00000422379 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
HPS4-204ENST00000422379 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.44
HPS4-204ENST00000422379 ANP32CO43423 234 aa12.27□□□□□ -0.44
HPS4-204ENST00000422379 PMFBP1Q8TBY8 1022 aa12.27□□□□□ -0.44
HPS4-204ENST00000422379 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.44
HPS4-204ENST00000422379 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
HPS4-204ENST00000422379 ACEP12821 1306 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 MST1RQ04912 1400 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 NCOA3Q9Y6Q9 1424 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 KNSTRNQ9Y448 316 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 PARD3Q8TEW0 1356 aa12.26□□□□□ -0.45
HPS4-204ENST00000422379 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
HPS4-204ENST00000422379 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
HPS4-204ENST00000422379 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
HPS4-204ENST00000422379 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 NRKQ7Z2Y5 1582 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
HPS4-204ENST00000422379 NPC1L1Q9UHC9 1359 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 DCCP43146 1447 aa12.24□□□□□ -0.45
HPS4-204ENST00000422379 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
HPS4-204ENST00000422379 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
HPS4-204ENST00000422379 FYB1O15117 783 aa12.23□□□□□ -0.45
HPS4-204ENST00000422379 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
HPS4-204ENST00000422379 USP6P35125 1406 aa12.23□□□□□ -0.45
HPS4-204ENST00000422379 MSH6P52701 1360 aa12.22□□□□□ -0.45
HPS4-204ENST00000422379 ESCO1Q5FWF5 840 aa12.22□□□□□ -0.45
HPS4-204ENST00000422379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
HPS4-204ENST00000422379 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
HPS4-204ENST00000422379 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
HPS4-204ENST00000422379 NME9Q86XW9 330 aa12.21□□□□□ -0.45
HPS4-204ENST00000422379 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
HPS4-204ENST00000422379 ATF3P18847 181 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms