RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 WAPLQ7Z5K2 1190 aa37.51■■■■□ 3.6
SMDT1-202ENST00000422252 YTHDC2Q9H6S0 1430 aaKnown RBP37.51■■■■□ 3.59
SMDT1-202ENST00000422252 CDC42BPGQ6DT37 1551 aa37.51■■■■□ 3.59
SMDT1-202ENST00000422252 ORAI2Q96SN7 254 aa37.5■■■■□ 3.59
SMDT1-202ENST00000422252 LAMC1P11047 1609 aa37.47■■■■□ 3.59
SMDT1-202ENST00000422252 CFAP70Q5T0N1 1121 aa37.46■■■■□ 3.59
SMDT1-202ENST00000422252 PLEKHH1Q9ULM0 1364 aa37.45■■■■□ 3.59
SMDT1-202ENST00000422252 NUTM2BA6NNL0 878 aaPredicted RBP37.44■■■■□ 3.58
SMDT1-202ENST00000422252 NUTM2EB1AL46 878 aaPredicted RBP37.44■■■■□ 3.58
SMDT1-202ENST00000422252 NUTM2AQ8IVF1 878 aaPredicted RBP37.44■■■■□ 3.58
SMDT1-202ENST00000422252 DHX57Q6P158 1386 aaKnown RBP37.42■■■■□ 3.58
SMDT1-202ENST00000422252 SIRT1Q96EB6 747 aa37.42■■■■□ 3.58
SMDT1-202ENST00000422252 PNPLA6Q8IY17 1366 aa37.42■■■■□ 3.58
SMDT1-202ENST00000422252 SOS2Q07890 1332 aaPredicted RBP37.4■■■■□ 3.58
SMDT1-202ENST00000422252 ESCO1Q5FWF5 840 aa37.38■■■■□ 3.57
SMDT1-202ENST00000422252 ZNF772Q68DY9 489 aaPredicted RBP37.37■■■■□ 3.57
SMDT1-202ENST00000422252 DCAF11Q8TEB1 546 aa37.34■■■■□ 3.57
SMDT1-202ENST00000422252 KDM2AQ9Y2K7 1162 aa37.33■■■■□ 3.57
SMDT1-202ENST00000422252 NUTM2FA1L443 756 aa37.32■■■■□ 3.56
SMDT1-202ENST00000422252 NPHP3Q7Z494 1330 aa37.32■■■■□ 3.56
SMDT1-202ENST00000422252 STAC3Q96MF2 364 aa37.31■■■■□ 3.56
SMDT1-202ENST00000422252 FMN2Q9NZ56 1722 aa37.3■■■■□ 3.56
SMDT1-202ENST00000422252 ADGRB1O14514 1584 aa37.28■■■■□ 3.56
SMDT1-202ENST00000422252 DLC1Q96QB1 1528 aa37.27■■■■□ 3.56
SMDT1-202ENST00000422252 PRAM1Q96QH2 718 aa37.27■■■■□ 3.56
SMDT1-202ENST00000422252 FOXO3O43524 673 aa37.25■■■■□ 3.55
SMDT1-202ENST00000422252 AFF2P51816 1311 aa37.25■■■■□ 3.55
SMDT1-202ENST00000422252 PXDNQ92626 1479 aa37.24■■■■□ 3.55
SMDT1-202ENST00000422252 SAFB2Q14151 953 aaKnown RBP eCLIP37.23■■■■□ 3.55
SMDT1-202ENST00000422252 C8orf37Q96NL8 207 aa37.23■■■■□ 3.55
SMDT1-202ENST00000422252 POGKQ9P215 609 aa37.22■■■■□ 3.55
SMDT1-202ENST00000422252 XPCQ01831 940 aaPredicted RBP37.19■■■■□ 3.54
SMDT1-202ENST00000422252 TRAK1Q9UPV9 953 aa37.19■■■■□ 3.54
SMDT1-202ENST00000422252 COL22A1Q8NFW1 1626 aaPredicted RBP37.18■■■■□ 3.54
SMDT1-202ENST00000422252 ADAMTS2O95450 1211 aa37.18■■■■□ 3.54
SMDT1-202ENST00000422252 KIF1AQ12756 1690 aa37.17■■■■□ 3.54
SMDT1-202ENST00000422252 RXRBP28702 533 aa37.15■■■■□ 3.54
SMDT1-202ENST00000422252 NGLY1Q96IV0 654 aa37.12■■■■□ 3.53
SMDT1-202ENST00000422252 PHF8Q9UPP1 1060 aa37.11■■■■□ 3.53
SMDT1-202ENST00000422252 ADGRB2O60241 1585 aa37.11■■■■□ 3.53
SMDT1-202ENST00000422252 RGPD8O14715 1765 aaPredicted RBP37.09■■■■□ 3.53
SMDT1-202ENST00000422252 KRT28Q7Z3Y7 464 aa37.07■■■■□ 3.52
SMDT1-202ENST00000422252 ANKARQ7Z5J8 1434 aa37.06■■■■□ 3.52
SMDT1-202ENST00000422252 QTRT2Q9H974 415 aaKnown RBP37.06■■■■□ 3.52
SMDT1-202ENST00000422252 HIRIP3Q9BW71 556 aaPredicted RBP37.05■■■■□ 3.52
SMDT1-202ENST00000422252 CDK12Q9NYV4 1490 aaPredicted RBP37.05■■■■□ 3.52
SMDT1-202ENST00000422252 SPATA31A3Q5VYP0 1347 aa37.05■■■■□ 3.52
SMDT1-202ENST00000422252 MINK1Q8N4C8 1332 aaPredicted RBP37.04■■■■□ 3.52
SMDT1-202ENST00000422252 USP32Q8NFA0 1604 aa37.02■■■■□ 3.52
SMDT1-202ENST00000422252 PSME1Q06323 249 aa37.01■■■■□ 3.52
SMDT1-202ENST00000422252 RBM6P78332 1123 aaKnown RBP37■■■■□ 3.51
SMDT1-202ENST00000422252 FNBP4Q8N3X1 1017 aaPredicted RBP37■■■■□ 3.51
SMDT1-202ENST00000422252 USP21Q9UK80 565 aa37■■■■□ 3.51
SMDT1-202ENST00000422252 EIF3AQ14152 1382 aaKnown RBP37■■■■□ 3.51
SMDT1-202ENST00000422252 ARHGEF28Q8N1W1 1705 aaKnown RBP36.98■■■■□ 3.51
SMDT1-202ENST00000422252 WASLO00401 505 aaPredicted RBP36.97■■■■□ 3.51
SMDT1-202ENST00000422252 KIAA1210Q9ULL0 1709 aa36.96■■■■□ 3.51
SMDT1-202ENST00000422252 TNS3Q68CZ2 1445 aa36.96■■■■□ 3.51
SMDT1-202ENST00000422252 PMFBP1Q8TBY8 1022 aa36.96■■■■□ 3.51
SMDT1-202ENST00000422252 TULP4Q9NRJ4 1543 aa36.95■■■■□ 3.5
SMDT1-202ENST00000422252 SBNO1A3KN83 1393 aa36.94■■■■□ 3.5
SMDT1-202ENST00000422252 MARF1Q9Y4F3 1742 aaKnown RBP36.93■■■■□ 3.5
SMDT1-202ENST00000422252 PRR36Q9H6K5 1346 aa36.93■■■■□ 3.5
SMDT1-202ENST00000422252 TRPC5Q9UL62 973 aaPredicted RBP36.93■■■■□ 3.5
SMDT1-202ENST00000422252 RGS12O14924 1447 aa36.91■■■■□ 3.5
SMDT1-202ENST00000422252 NBPF1Q3BBV0 1214 aa36.88■■■■□ 3.49
SMDT1-202ENST00000422252 ATRNO75882 1429 aa36.87■■■■□ 3.49
SMDT1-202ENST00000422252 ARHGEF10O15013 1369 aa36.87■■■■□ 3.49
SMDT1-202ENST00000422252 LMOD2Q6P5Q4 547 aa36.86■■■■□ 3.49
SMDT1-202ENST00000422252 BCL9LQ86UU0 1499 aa36.86■■■■□ 3.49
SMDT1-202ENST00000422252 UPF1Q92900 1129 aaKnown RBP eCLIP36.85■■■■□ 3.49
SMDT1-202ENST00000422252 GPRASP1Q5JY77 1395 aa36.83■■■■□ 3.49
SMDT1-202ENST00000422252 HAP1P54257 671 aaPredicted RBP36.83■■■■□ 3.49
SMDT1-202ENST00000422252 L3MBTL2Q969R5 705 aa36.83■■■■□ 3.49
SMDT1-202ENST00000422252 SIN3AQ96ST3 1273 aa36.83■■■■□ 3.49
SMDT1-202ENST00000422252 CABLES1Q8TDN4 633 aa36.81■■■■□ 3.48
SMDT1-202ENST00000422252 ATP7BP35670 1465 aa36.8■■■■□ 3.48
SMDT1-202ENST00000422252 TRPM3Q9HCF6 1732 aaPredicted RBP36.79■■■■□ 3.48
SMDT1-202ENST00000422252 NGDNQ8NEJ9 315 aaKnown RBP36.79■■■■□ 3.48
SMDT1-202ENST00000422252 NUDT16Q96DE0 195 aaKnown RBP36.79■■■■□ 3.48
SMDT1-202ENST00000422252 PLEKHG5O94827 1062 aa36.78■■■■□ 3.48
SMDT1-202ENST00000422252 CDK19Q9BWU1 502 aa36.78■■■■□ 3.48
SMDT1-202ENST00000422252 SLIT2O94813 1529 aa36.78■■■■□ 3.48
SMDT1-202ENST00000422252 ITSN1Q15811 1721 aa36.76■■■■□ 3.48
SMDT1-202ENST00000422252 NEUROD1Q13562 356 aa36.75■■■■□ 3.47
SMDT1-202ENST00000422252 UNC5CLQ8IV45 518 aa36.75■■■■□ 3.47
SMDT1-202ENST00000422252 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.75■■■■□ 3.47
SMDT1-202ENST00000422252 ABCA3Q99758 1704 aa36.74■■■■□ 3.47
SMDT1-202ENST00000422252 GJD4Q96KN9 370 aaPredicted RBP36.72■■■■□ 3.47
SMDT1-202ENST00000422252 ALS2Q96Q42 1657 aa36.72■■■■□ 3.47
SMDT1-202ENST00000422252 CENPJQ9HC77 1338 aaPredicted RBP36.7■■■■□ 3.47
SMDT1-202ENST00000422252 PAK3O75914 559 aaPredicted RBP36.67■■■■□ 3.46
SMDT1-202ENST00000422252 CCDC61Q9Y6R9 512 aa36.67■■■■□ 3.46
SMDT1-202ENST00000422252 TOPAZ1Q8N9V7 1692 aa36.65■■■■□ 3.46
SMDT1-202ENST00000422252 PLCH1Q4KWH8 1693 aa36.64■■■■□ 3.46
SMDT1-202ENST00000422252 TRPM1Q7Z4N2 1603 aa36.63■■■■□ 3.45
SMDT1-202ENST00000422252 RALGAPBQ86X10 1494 aa36.63■■■■□ 3.45
SMDT1-202ENST00000422252 POLR3AO14802 1390 aaPredicted RBP36.63■■■■□ 3.45
SMDT1-202ENST00000422252 ATAD2Q6PL18 1390 aa36.63■■■■□ 3.45
SMDT1-202ENST00000422252 NWD2Q9ULI1 1742 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms