RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 HECW2Q9P2P5 1572 aa12.46□□□□□ -0.41
CMSS1-201ENST00000421999 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.41
CMSS1-201ENST00000421999 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.42
CMSS1-201ENST00000421999 TESK2Q96S53 571 aa12.46□□□□□ -0.42
CMSS1-201ENST00000421999 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
CMSS1-201ENST00000421999 TEFQ10587 303 aa12.45□□□□□ -0.42
CMSS1-201ENST00000421999 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-201ENST00000421999 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-201ENST00000421999 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-201ENST00000421999 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-201ENST00000421999 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-201ENST00000421999 RGS3P49796 1198 aa12.44□□□□□ -0.42
CMSS1-201ENST00000421999 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-201ENST00000421999 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-201ENST00000421999 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 FOXO3O43524 673 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 APBB1O00213 710 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 MSH5O43196 834 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 B4GALNT3Q6L9W6 998 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
CMSS1-201ENST00000421999 ZBED9Q6R2W3 1325 aa12.42□□□□□ -0.42
CMSS1-201ENST00000421999 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
CMSS1-201ENST00000421999 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
CMSS1-201ENST00000421999 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
CMSS1-201ENST00000421999 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
CMSS1-201ENST00000421999 UGGT1Q9NYU2 1555 aa12.42□□□□□ -0.42
CMSS1-201ENST00000421999 NME9Q86XW9 330 aa12.41□□□□□ -0.42
CMSS1-201ENST00000421999 RIPK4P57078 832 aa12.41□□□□□ -0.42
CMSS1-201ENST00000421999 LTKP29376 864 aa12.41□□□□□ -0.42
CMSS1-201ENST00000421999 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
CMSS1-201ENST00000421999 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
CMSS1-201ENST00000421999 KCNA6P17658 529 aa12.4□□□□□ -0.42
CMSS1-201ENST00000421999 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
CMSS1-201ENST00000421999 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
CMSS1-201ENST00000421999 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
CMSS1-201ENST00000421999 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
CMSS1-201ENST00000421999 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.43
CMSS1-201ENST00000421999 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.43
CMSS1-201ENST00000421999 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.43
CMSS1-201ENST00000421999 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
CMSS1-201ENST00000421999 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
CMSS1-201ENST00000421999 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
CMSS1-201ENST00000421999 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
CMSS1-201ENST00000421999 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
CMSS1-201ENST00000421999 TBX22Q9Y458 520 aa12.38□□□□□ -0.43
CMSS1-201ENST00000421999 KDM5DQ9BY66 1539 aa12.38□□□□□ -0.43
CMSS1-201ENST00000421999 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
CMSS1-201ENST00000421999 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
CMSS1-201ENST00000421999 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
CMSS1-201ENST00000421999 TMEM2Q9UHN6 1383 aa12.37□□□□□ -0.43
CMSS1-201ENST00000421999 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
CMSS1-201ENST00000421999 PRKAR2BP31323 418 aa12.37□□□□□ -0.43
CMSS1-201ENST00000421999 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
CMSS1-201ENST00000421999 FBLN1P23142 703 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 ACEP12821 1306 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 E9PSI1 815 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
CMSS1-201ENST00000421999 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
CMSS1-201ENST00000421999 PTPRTO14522 1441 aa12.35□□□□□ -0.43
CMSS1-201ENST00000421999 KCNJ4P48050 445 aa12.35□□□□□ -0.43
CMSS1-201ENST00000421999 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
CMSS1-201ENST00000421999 PLIN1O60240 522 aa12.35□□□□□ -0.43
CMSS1-201ENST00000421999 EIF2S2P20042 333 aaKnown RBP12.35□□□□□ -0.43
CMSS1-201ENST00000421999 ABCC3O15438 1527 aa12.35□□□□□ -0.43
CMSS1-201ENST00000421999 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
CMSS1-201ENST00000421999 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
CMSS1-201ENST00000421999 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
CMSS1-201ENST00000421999 TRPM2O94759 1503 aa12.33□□□□□ -0.44
CMSS1-201ENST00000421999 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CMSS1-201ENST00000421999 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
CMSS1-201ENST00000421999 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-201ENST00000421999 CARD14Q9BXL6 1004 aa12.32□□□□□ -0.44
CMSS1-201ENST00000421999 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
CMSS1-201ENST00000421999 LRPPRCP42704 1394 aaKnown RBP12.32□□□□□ -0.44
CMSS1-201ENST00000421999 FGD1P98174 961 aa12.32□□□□□ -0.44
CMSS1-201ENST00000421999 ERVK-7P63135 1459 aa12.32□□□□□ -0.44
CMSS1-201ENST00000421999 FYB1O15117 783 aa12.32□□□□□ -0.44
CMSS1-201ENST00000421999 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
CMSS1-201ENST00000421999 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
CMSS1-201ENST00000421999 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
CMSS1-201ENST00000421999 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
CMSS1-201ENST00000421999 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
CMSS1-201ENST00000421999 KRT28Q7Z3Y7 464 aa12.3□□□□□ -0.44
CMSS1-201ENST00000421999 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CMSS1-201ENST00000421999 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
CMSS1-201ENST00000421999 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
CMSS1-201ENST00000421999 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-201ENST00000421999 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
CMSS1-201ENST00000421999 G3V3G9 751 aa12.29□□□□□ -0.44
CMSS1-201ENST00000421999 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
CMSS1-201ENST00000421999 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-201ENST00000421999 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
CMSS1-201ENST00000421999 TET3O43151 1660 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms