RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
DDX55-203ENST00000421670 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
DDX55-203ENST00000421670 ADGRB2O60241 1585 aa22.14■■□□□ 1.13
DDX55-203ENST00000421670 TMEM94Q12767 1356 aa22.14■■□□□ 1.13
DDX55-203ENST00000421670 MINK1Q8N4C8 1332 aaPredicted RBP22.12■■□□□ 1.13
DDX55-203ENST00000421670 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
DDX55-203ENST00000421670 TULP4Q9NRJ4 1543 aa22.1■■□□□ 1.13
DDX55-203ENST00000421670 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
DDX55-203ENST00000421670 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.13
DDX55-203ENST00000421670 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
DDX55-203ENST00000421670 TESK2Q96S53 571 aa22.08■■□□□ 1.13
DDX55-203ENST00000421670 FMN2Q9NZ56 1722 aa22.08■■□□□ 1.13
DDX55-203ENST00000421670 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
DDX55-203ENST00000421670 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
DDX55-203ENST00000421670 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
DDX55-203ENST00000421670 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
DDX55-203ENST00000421670 MSH6P52701 1360 aa22.02■■□□□ 1.12
DDX55-203ENST00000421670 DCCP43146 1447 aa22■■□□□ 1.11
DDX55-203ENST00000421670 ITSN1Q15811 1721 aa22■■□□□ 1.11
DDX55-203ENST00000421670 TOPAZ1Q8N9V7 1692 aa21.99■■□□□ 1.11
DDX55-203ENST00000421670 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
DDX55-203ENST00000421670 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
DDX55-203ENST00000421670 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
DDX55-203ENST00000421670 MYOM1P52179 1685 aa21.98■■□□□ 1.11
DDX55-203ENST00000421670 TMF1P82094 1093 aa21.98■■□□□ 1.11
DDX55-203ENST00000421670 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
DDX55-203ENST00000421670 ATP7BP35670 1465 aa21.97■■□□□ 1.11
DDX55-203ENST00000421670 NUTM2FA1L443 756 aa21.96■■□□□ 1.11
DDX55-203ENST00000421670 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
DDX55-203ENST00000421670 SRPK2P78362 688 aaKnown RBP21.95■■□□□ 1.11
DDX55-203ENST00000421670 CABP2Q9NPB3 220 aa21.95■■□□□ 1.11
DDX55-203ENST00000421670 IQSEC2Q5JU85 1478 aa21.94■■□□□ 1.1
DDX55-203ENST00000421670 ATF3P18847 181 aa21.94■■□□□ 1.1
DDX55-203ENST00000421670 MST1RQ04912 1400 aa21.93■■□□□ 1.1
DDX55-203ENST00000421670 SLC24A1O60721 1099 aa21.92■■□□□ 1.1
DDX55-203ENST00000421670 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
DDX55-203ENST00000421670 CADPS2Q86UW7 1296 aa21.91■■□□□ 1.1
DDX55-203ENST00000421670 CERKQ8TCT0 537 aa21.91■■□□□ 1.1
DDX55-203ENST00000421670 POLR3GLQ9BT43 218 aa21.91■■□□□ 1.1
DDX55-203ENST00000421670 ANKARQ7Z5J8 1434 aa21.91■■□□□ 1.1
DDX55-203ENST00000421670 KIF7Q2M1P5 1343 aa21.9■■□□□ 1.1
DDX55-203ENST00000421670 WASHC2AQ641Q2 1341 aa21.9■■□□□ 1.1
DDX55-203ENST00000421670 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
DDX55-203ENST00000421670 CCDC7Q96M83 1385 aa21.89■■□□□ 1.09
DDX55-203ENST00000421670 NUDT16Q96DE0 195 aaKnown RBP21.88■■□□□ 1.09
DDX55-203ENST00000421670 KIF1AQ12756 1690 aa21.88■■□□□ 1.09
DDX55-203ENST00000421670 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
DDX55-203ENST00000421670 CDCA8Q53HL2 280 aa21.87■■□□□ 1.09
DDX55-203ENST00000421670 PPIP5K1Q6PFW1 1433 aa21.87■■□□□ 1.09
DDX55-203ENST00000421670 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
DDX55-203ENST00000421670 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
DDX55-203ENST00000421670 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
DDX55-203ENST00000421670 PUS7Q96PZ0 661 aaKnown RBP21.83■■□□□ 1.09
DDX55-203ENST00000421670 SLAIN2Q9P270 581 aa21.83■■□□□ 1.09
DDX55-203ENST00000421670 ORAI2Q96SN7 254 aa21.82■■□□□ 1.08
DDX55-203ENST00000421670 CCDC61Q9Y6R9 512 aa21.82■■□□□ 1.08
DDX55-203ENST00000421670 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
DDX55-203ENST00000421670 TMC1Q8TDI8 760 aa21.82■■□□□ 1.08
DDX55-203ENST00000421670 MON2Q7Z3U7 1717 aa21.82■■□□□ 1.08
DDX55-203ENST00000421670 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
DDX55-203ENST00000421670 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
DDX55-203ENST00000421670 CABP1Q9NZU7 370 aa21.8■■□□□ 1.08
DDX55-203ENST00000421670 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
DDX55-203ENST00000421670 CD163L1Q9NR16 1453 aa21.8■■□□□ 1.08
DDX55-203ENST00000421670 SLC12A5Q9H2X9 1139 aa21.79■■□□□ 1.08
DDX55-203ENST00000421670 TOM1O60784 492 aa21.78■■□□□ 1.08
DDX55-203ENST00000421670 NINLQ9Y2I6 1382 aa21.78■■□□□ 1.08
DDX55-203ENST00000421670 BRINP3Q76B58 766 aa21.78■■□□□ 1.08
DDX55-203ENST00000421670 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
DDX55-203ENST00000421670 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.08
DDX55-203ENST00000421670 PIP4K2BP78356 416 aa21.76■■□□□ 1.07
DDX55-203ENST00000421670 A0A1W2PP64 1363 aa21.75■■□□□ 1.07
DDX55-203ENST00000421670 ACEP12821 1306 aa21.75■■□□□ 1.07
DDX55-203ENST00000421670 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
DDX55-203ENST00000421670 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
DDX55-203ENST00000421670 PLEKHG3A1L390 1219 aa21.74■■□□□ 1.07
DDX55-203ENST00000421670 TRPM3Q9HCF6 1732 aaPredicted RBP21.73■■□□□ 1.07
DDX55-203ENST00000421670 ANKRD36BQ8N2N9 1353 aa21.73■■□□□ 1.07
DDX55-203ENST00000421670 CPSF1Q10570 1443 aaKnown RBP21.73■■□□□ 1.07
DDX55-203ENST00000421670 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
DDX55-203ENST00000421670 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
DDX55-203ENST00000421670 PHLPP1O60346 1717 aa21.72■■□□□ 1.07
DDX55-203ENST00000421670 FOXO3O43524 673 aa21.72■■□□□ 1.07
DDX55-203ENST00000421670 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
DDX55-203ENST00000421670 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
DDX55-203ENST00000421670 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
DDX55-203ENST00000421670 USP6P35125 1406 aa21.7■■□□□ 1.06
DDX55-203ENST00000421670 PXDNQ92626 1479 aa21.7■■□□□ 1.06
DDX55-203ENST00000421670 XPCQ01831 940 aaPredicted RBP21.7■■□□□ 1.06
DDX55-203ENST00000421670 TERF2IPQ9NYB0 399 aa21.7■■□□□ 1.06
DDX55-203ENST00000421670 DDX10Q13206 875 aaKnown RBP21.69■■□□□ 1.06
DDX55-203ENST00000421670 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
DDX55-203ENST00000421670 PANK3Q9H999 370 aa21.69■■□□□ 1.06
DDX55-203ENST00000421670 NSD3Q9BZ95 1437 aa21.67■■□□□ 1.06
DDX55-203ENST00000421670 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
DDX55-203ENST00000421670 PIK3C2AO00443 1686 aa21.67■■□□□ 1.06
DDX55-203ENST00000421670 ALS2Q96Q42 1657 aa21.67■■□□□ 1.06
DDX55-203ENST00000421670 COL16A1Q07092 1604 aaPredicted RBP21.67■■□□□ 1.06
DDX55-203ENST00000421670 PSME1Q06323 249 aa21.65■■□□□ 1.06
DDX55-203ENST00000421670 EDC4Q6P2E9 1401 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms