RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC00443-201ENST00000421601 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
LINC00443-201ENST00000421601 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
LINC00443-201ENST00000421601 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
LINC00443-201ENST00000421601 HSPA2P54652 639 aa16.53■□□□□ 0.24
LINC00443-201ENST00000421601 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
LINC00443-201ENST00000421601 SBNO2Q9Y2G9 1366 aa16.52■□□□□ 0.24
LINC00443-201ENST00000421601 MIER1Q8N108 512 aa16.52■□□□□ 0.24
LINC00443-201ENST00000421601 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
LINC00443-201ENST00000421601 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
LINC00443-201ENST00000421601 ARHGEF28Q8N1W1 1705 aaKnown RBP16.51■□□□□ 0.23
LINC00443-201ENST00000421601 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
LINC00443-201ENST00000421601 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
LINC00443-201ENST00000421601 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
LINC00443-201ENST00000421601 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
LINC00443-201ENST00000421601 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
LINC00443-201ENST00000421601 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
LINC00443-201ENST00000421601 DIP2AQ14689 1571 aa16.48■□□□□ 0.23
LINC00443-201ENST00000421601 TECPR2O15040 1411 aa16.48■□□□□ 0.23
LINC00443-201ENST00000421601 ABCB7O75027 752 aa16.48■□□□□ 0.23
LINC00443-201ENST00000421601 PIK3R4Q99570 1358 aa16.48■□□□□ 0.23
LINC00443-201ENST00000421601 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
LINC00443-201ENST00000421601 ROBO2Q9HCK4 1378 aa16.47■□□□□ 0.23
LINC00443-201ENST00000421601 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
LINC00443-201ENST00000421601 CABP2Q9NPB3 220 aa16.46■□□□□ 0.23
LINC00443-201ENST00000421601 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
LINC00443-201ENST00000421601 KCNA6P17658 529 aa16.45■□□□□ 0.22
LINC00443-201ENST00000421601 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
LINC00443-201ENST00000421601 PANK3Q9H999 370 aa16.45■□□□□ 0.22
LINC00443-201ENST00000421601 ANP32CO43423 234 aa16.44■□□□□ 0.22
LINC00443-201ENST00000421601 SRPK2P78362 688 aaKnown RBP16.44■□□□□ 0.22
LINC00443-201ENST00000421601 KNDC1Q76NI1 1749 aa16.43■□□□□ 0.22
LINC00443-201ENST00000421601 CPS1P31327 1500 aa16.43■□□□□ 0.22
LINC00443-201ENST00000421601 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
LINC00443-201ENST00000421601 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
LINC00443-201ENST00000421601 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
LINC00443-201ENST00000421601 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
LINC00443-201ENST00000421601 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
LINC00443-201ENST00000421601 PTCH1Q13635 1447 aa16.39■□□□□ 0.21
LINC00443-201ENST00000421601 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
LINC00443-201ENST00000421601 XRN1Q8IZH2 1706 aaKnown RBP16.37■□□□□ 0.21
LINC00443-201ENST00000421601 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
LINC00443-201ENST00000421601 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
LINC00443-201ENST00000421601 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.36■□□□□ 0.21
LINC00443-201ENST00000421601 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
LINC00443-201ENST00000421601 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
LINC00443-201ENST00000421601 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
LINC00443-201ENST00000421601 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
LINC00443-201ENST00000421601 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
LINC00443-201ENST00000421601 STRCQ7RTU9 1775 aa16.34■□□□□ 0.21
LINC00443-201ENST00000421601 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
LINC00443-201ENST00000421601 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
LINC00443-201ENST00000421601 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
LINC00443-201ENST00000421601 MYOM1P52179 1685 aa16.33■□□□□ 0.2
LINC00443-201ENST00000421601 NINLQ9Y2I6 1382 aa16.31■□□□□ 0.2
LINC00443-201ENST00000421601 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
LINC00443-201ENST00000421601 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
LINC00443-201ENST00000421601 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
LINC00443-201ENST00000421601 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
LINC00443-201ENST00000421601 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
LINC00443-201ENST00000421601 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
LINC00443-201ENST00000421601 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
LINC00443-201ENST00000421601 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
LINC00443-201ENST00000421601 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
LINC00443-201ENST00000421601 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
LINC00443-201ENST00000421601 NWD1Q149M9 1564 aa16.29■□□□□ 0.2
LINC00443-201ENST00000421601 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
LINC00443-201ENST00000421601 RALBP1Q15311 655 aa16.28■□□□□ 0.2
LINC00443-201ENST00000421601 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
LINC00443-201ENST00000421601 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
LINC00443-201ENST00000421601 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
LINC00443-201ENST00000421601 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
LINC00443-201ENST00000421601 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
LINC00443-201ENST00000421601 PLEKHG3A1L390 1219 aa16.25■□□□□ 0.19
LINC00443-201ENST00000421601 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
LINC00443-201ENST00000421601 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
LINC00443-201ENST00000421601 CD163L1Q9NR16 1453 aa16.24■□□□□ 0.19
LINC00443-201ENST00000421601 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
LINC00443-201ENST00000421601 C19orf44Q9H6X5 657 aa16.24■□□□□ 0.19
LINC00443-201ENST00000421601 ADGRL3Q9HAR2 1447 aa16.24■□□□□ 0.19
LINC00443-201ENST00000421601 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
LINC00443-201ENST00000421601 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
LINC00443-201ENST00000421601 ATP7BP35670 1465 aa16.23■□□□□ 0.19
LINC00443-201ENST00000421601 ZNF335Q9H4Z2 1342 aaPredicted RBP16.23■□□□□ 0.19
LINC00443-201ENST00000421601 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
LINC00443-201ENST00000421601 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
LINC00443-201ENST00000421601 PARD3Q8TEW0 1356 aa16.23■□□□□ 0.19
LINC00443-201ENST00000421601 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
LINC00443-201ENST00000421601 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
LINC00443-201ENST00000421601 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
LINC00443-201ENST00000421601 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
LINC00443-201ENST00000421601 ACEP12821 1306 aa16.2■□□□□ 0.18
LINC00443-201ENST00000421601 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
LINC00443-201ENST00000421601 CPSF1Q10570 1443 aaKnown RBP16.2■□□□□ 0.18
LINC00443-201ENST00000421601 ANKARQ7Z5J8 1434 aa16.2■□□□□ 0.18
LINC00443-201ENST00000421601 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
LINC00443-201ENST00000421601 NALCNQ8IZF0 1738 aa16.2■□□□□ 0.18
LINC00443-201ENST00000421601 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
LINC00443-201ENST00000421601 NGDNQ8NEJ9 315 aaKnown RBP16.19■□□□□ 0.18
LINC00443-201ENST00000421601 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms