RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 DUOX2Q9NRD8 1548 aa11.53□□□□□ -0.56
AC012560.1-202ENST00000421324 C3P01024 1663 aa11.52□□□□□ -0.56
AC012560.1-202ENST00000421324 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
AC012560.1-202ENST00000421324 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
AC012560.1-202ENST00000421324 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
AC012560.1-202ENST00000421324 ITGAEP38570 1179 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 EMP3P54852 163 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
AC012560.1-202ENST00000421324 POTEB3A0JP26 581 aa11.5□□□□□ -0.57
AC012560.1-202ENST00000421324 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
AC012560.1-202ENST00000421324 POTEBQ6S5H4 581 aa11.5□□□□□ -0.57
AC012560.1-202ENST00000421324 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
AC012560.1-202ENST00000421324 ERBINQ96RT1 1412 aa11.5□□□□□ -0.57
AC012560.1-202ENST00000421324 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
AC012560.1-202ENST00000421324 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
AC012560.1-202ENST00000421324 KANK1Q14678 1352 aa11.49□□□□□ -0.57
AC012560.1-202ENST00000421324 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
AC012560.1-202ENST00000421324 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
AC012560.1-202ENST00000421324 PDE4AP27815 886 aa11.48□□□□□ -0.57
AC012560.1-202ENST00000421324 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
AC012560.1-202ENST00000421324 EIF2AK4Q9P2K8 1649 aaKnown RBP11.47□□□□□ -0.57
AC012560.1-202ENST00000421324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
AC012560.1-202ENST00000421324 TNRQ92752 1358 aa11.46□□□□□ -0.57
AC012560.1-202ENST00000421324 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
AC012560.1-202ENST00000421324 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
AC012560.1-202ENST00000421324 PTCD2Q8WV60 388 aaKnown RBP11.46□□□□□ -0.57
AC012560.1-202ENST00000421324 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
AC012560.1-202ENST00000421324 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 PZPP20742 1482 aa11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 MFSD10Q14728 455 aa11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 HS3ST6Q96QI5 342 aa11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
AC012560.1-202ENST00000421324 ANKRD50Q9ULJ7 1429 aa11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 ABCC3O15438 1527 aa11.44□□□□□ -0.58
AC012560.1-202ENST00000421324 THEMISQ8N1K5 641 aaPredicted RBP11.43□□□□□ -0.58
AC012560.1-202ENST00000421324 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
AC012560.1-202ENST00000421324 ZC3H13Q5T200 1668 aaKnown RBP11.41□□□□□ -0.58
AC012560.1-202ENST00000421324 A2ML1A8K2U0 1454 aa11.41□□□□□ -0.58
AC012560.1-202ENST00000421324 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
AC012560.1-202ENST00000421324 MROH1Q8NDA8 1641 aa11.4□□□□□ -0.58
AC012560.1-202ENST00000421324 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
AC012560.1-202ENST00000421324 ARHGAP31Q2M1Z3 1444 aa11.4□□□□□ -0.58
AC012560.1-202ENST00000421324 PRDM15P57071 1507 aaPredicted RBP11.4□□□□□ -0.59
AC012560.1-202ENST00000421324 ERBB3P21860 1342 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 NLRP1Q9C000 1473 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 CAMSAP1Q5T5Y3 1602 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 PTPRTO14522 1441 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 NUDT7P0C024 238 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
AC012560.1-202ENST00000421324 MYO3AQ8NEV4 1616 aa11.38□□□□□ -0.59
AC012560.1-202ENST00000421324 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
AC012560.1-202ENST00000421324 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
AC012560.1-202ENST00000421324 DEPDC5O75140 1603 aa11.37□□□□□ -0.59
AC012560.1-202ENST00000421324 NUP155O75694 1391 aa11.37□□□□□ -0.59
AC012560.1-202ENST00000421324 CEP152O94986 1710 aa11.37□□□□□ -0.59
AC012560.1-202ENST00000421324 PLA2R1Q13018 1463 aa11.37□□□□□ -0.59
AC012560.1-202ENST00000421324 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
AC012560.1-202ENST00000421324 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
AC012560.1-202ENST00000421324 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
AC012560.1-202ENST00000421324 CERKQ8TCT0 537 aa11.36□□□□□ -0.59
AC012560.1-202ENST00000421324 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
AC012560.1-202ENST00000421324 IDI1Q13907 227 aa11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 UGGT1Q9NYU2 1555 aa11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
AC012560.1-202ENST00000421324 FBXO41Q8TF61 875 aa11.34□□□□□ -0.59
AC012560.1-202ENST00000421324 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
AC012560.1-202ENST00000421324 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
AC012560.1-202ENST00000421324 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
AC012560.1-202ENST00000421324 EID1Q9Y6B2 187 aa11.33□□□□□ -0.6
AC012560.1-202ENST00000421324 TBC1D12O60347 775 aa11.32□□□□□ -0.6
AC012560.1-202ENST00000421324 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
AC012560.1-202ENST00000421324 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
AC012560.1-202ENST00000421324 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
AC012560.1-202ENST00000421324 RPRD2Q5VT52 1461 aaKnown RBP11.32□□□□□ -0.6
AC012560.1-202ENST00000421324 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
AC012560.1-202ENST00000421324 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
AC012560.1-202ENST00000421324 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC012560.1-202ENST00000421324 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
AC012560.1-202ENST00000421324 UNC13BO14795 1591 aa11.3□□□□□ -0.6
AC012560.1-202ENST00000421324 NOS1P29475 1434 aa11.3□□□□□ -0.6
AC012560.1-202ENST00000421324 NAIPQ13075 1403 aa11.3□□□□□ -0.6
AC012560.1-202ENST00000421324 HDGFP51858 240 aaKnown RBP11.3□□□□□ -0.6
AC012560.1-202ENST00000421324 HFM1A2PYH4 1435 aa11.29□□□□□ -0.6
AC012560.1-202ENST00000421324 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
AC012560.1-202ENST00000421324 NPHP4O75161 1426 aaPredicted RBP11.28□□□□□ -0.6
AC012560.1-202ENST00000421324 TET3O43151 1660 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms