RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 SLC24A1O60721 1099 aa24.62■■□□□ 1.53
PPFIA3-202ENST00000421230 PLEKHH1Q9ULM0 1364 aa24.61■■□□□ 1.53
PPFIA3-202ENST00000421230 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
PPFIA3-202ENST00000421230 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
PPFIA3-202ENST00000421230 DLC1Q96QB1 1528 aa24.59■■□□□ 1.53
PPFIA3-202ENST00000421230 PTPRUQ92729 1446 aa24.58■■□□□ 1.53
PPFIA3-202ENST00000421230 NCKAP5LQ9HCH0 1330 aa24.57■■□□□ 1.52
PPFIA3-202ENST00000421230 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
PPFIA3-202ENST00000421230 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
PPFIA3-202ENST00000421230 KNDC1Q76NI1 1749 aa24.56■■□□□ 1.52
PPFIA3-202ENST00000421230 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
PPFIA3-202ENST00000421230 DIP2AQ14689 1571 aa24.55■■□□□ 1.52
PPFIA3-202ENST00000421230 TECPR2O15040 1411 aa24.55■■□□□ 1.52
PPFIA3-202ENST00000421230 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
PPFIA3-202ENST00000421230 PANK3Q9H999 370 aa24.55■■□□□ 1.52
PPFIA3-202ENST00000421230 ROBO2Q9HCK4 1378 aa24.54■■□□□ 1.52
PPFIA3-202ENST00000421230 PPP4R2Q9NY27 417 aa24.54■■□□□ 1.52
PPFIA3-202ENST00000421230 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
PPFIA3-202ENST00000421230 MYOM1P52179 1685 aa24.54■■□□□ 1.52
PPFIA3-202ENST00000421230 CABP2Q9NPB3 220 aa24.53■■□□□ 1.52
PPFIA3-202ENST00000421230 CPS1P31327 1500 aa24.53■■□□□ 1.52
PPFIA3-202ENST00000421230 HSPA2P54652 639 aa24.53■■□□□ 1.52
PPFIA3-202ENST00000421230 NPHP4O75161 1426 aaPredicted RBP24.51■■□□□ 1.51
PPFIA3-202ENST00000421230 SIRT1Q96EB6 747 aa24.5■■□□□ 1.51
PPFIA3-202ENST00000421230 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
PPFIA3-202ENST00000421230 SRPK2P78362 688 aaKnown RBP24.49■■□□□ 1.51
PPFIA3-202ENST00000421230 TMC1Q8TDI8 760 aa24.48■■□□□ 1.51
PPFIA3-202ENST00000421230 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
PPFIA3-202ENST00000421230 PRKRIP1Q9H875 184 aaPredicted RBP24.47■■□□□ 1.51
PPFIA3-202ENST00000421230 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
PPFIA3-202ENST00000421230 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
PPFIA3-202ENST00000421230 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
PPFIA3-202ENST00000421230 KCNA6P17658 529 aa24.45■■□□□ 1.5
PPFIA3-202ENST00000421230 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.5
PPFIA3-202ENST00000421230 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
PPFIA3-202ENST00000421230 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-202ENST00000421230 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
PPFIA3-202ENST00000421230 PUS7Q96PZ0 661 aaKnown RBP24.43■■□□□ 1.5
PPFIA3-202ENST00000421230 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.43■■□□□ 1.5
PPFIA3-202ENST00000421230 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-202ENST00000421230 PTCH1Q13635 1447 aa24.42■■□□□ 1.5
PPFIA3-202ENST00000421230 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
PPFIA3-202ENST00000421230 PRKCSHP14314 528 aaPredicted RBP24.41■■□□□ 1.5
PPFIA3-202ENST00000421230 ZBED9Q6R2W3 1325 aa24.41■■□□□ 1.5
PPFIA3-202ENST00000421230 CARD14Q9BXL6 1004 aa24.38■■□□□ 1.49
PPFIA3-202ENST00000421230 KNSTRNQ9Y448 316 aa24.38■■□□□ 1.49
PPFIA3-202ENST00000421230 CC2D1BQ5T0F9 858 aaKnown RBP24.38■■□□□ 1.49
PPFIA3-202ENST00000421230 ATAD2Q6PL18 1390 aa24.37■■□□□ 1.49
PPFIA3-202ENST00000421230 RBM33Q96EV2 1170 aaKnown RBP24.35■■□□□ 1.49
PPFIA3-202ENST00000421230 KTN1Q86UP2 1357 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-202ENST00000421230 CABP1Q9NZU7 370 aa24.33■■□□□ 1.49
PPFIA3-202ENST00000421230 MRS2Q9HD23 443 aa24.33■■□□□ 1.48
PPFIA3-202ENST00000421230 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
PPFIA3-202ENST00000421230 NUTM2FA1L443 756 aa24.32■■□□□ 1.48
PPFIA3-202ENST00000421230 AMER1Q5JTC6 1135 aaPredicted RBP24.32■■□□□ 1.48
PPFIA3-202ENST00000421230 FAM9BQ8IZU0 186 aa24.31■■□□□ 1.48
PPFIA3-202ENST00000421230 NUDT16Q96DE0 195 aaKnown RBP24.31■■□□□ 1.48
PPFIA3-202ENST00000421230 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
PPFIA3-202ENST00000421230 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
PPFIA3-202ENST00000421230 ANKRD36BQ8N2N9 1353 aa24.3■■□□□ 1.48
PPFIA3-202ENST00000421230 NSD3Q9BZ95 1437 aa24.3■■□□□ 1.48
PPFIA3-202ENST00000421230 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
PPFIA3-202ENST00000421230 PRR36Q9H6K5 1346 aa24.29■■□□□ 1.48
PPFIA3-202ENST00000421230 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
PPFIA3-202ENST00000421230 RALBP1Q15311 655 aa24.29■■□□□ 1.48
PPFIA3-202ENST00000421230 PARD3Q8TEW0 1356 aa24.28■■□□□ 1.48
PPFIA3-202ENST00000421230 CD163L1Q9NR16 1453 aa24.27■■□□□ 1.48
PPFIA3-202ENST00000421230 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
PPFIA3-202ENST00000421230 ATP7BP35670 1465 aa24.26■■□□□ 1.47
PPFIA3-202ENST00000421230 NWD1Q149M9 1564 aa24.26■■□□□ 1.47
PPFIA3-202ENST00000421230 TERF2IPQ9NYB0 399 aa24.26■■□□□ 1.47
PPFIA3-202ENST00000421230 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
PPFIA3-202ENST00000421230 NALCNQ8IZF0 1738 aa24.24■■□□□ 1.47
PPFIA3-202ENST00000421230 MYBBP1AQ9BQG0 1328 aaKnown RBP24.23■■□□□ 1.47
PPFIA3-202ENST00000421230 HDGFL2Q7Z4V5 671 aaPredicted RBP24.23■■□□□ 1.47
PPFIA3-202ENST00000421230 PROSER2Q86WR7 435 aaPredicted RBP24.22■■□□□ 1.47
PPFIA3-202ENST00000421230 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
PPFIA3-202ENST00000421230 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
PPFIA3-202ENST00000421230 NPC1L1Q9UHC9 1359 aa24.21■■□□□ 1.47
PPFIA3-202ENST00000421230 C14orf37Q86TY3 774 aa24.2■■□□□ 1.47
PPFIA3-202ENST00000421230 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
PPFIA3-202ENST00000421230 RGPD8O14715 1765 aaPredicted RBP24.19■■□□□ 1.46
PPFIA3-202ENST00000421230 CGNL1Q0VF96 1302 aa24.18■■□□□ 1.46
PPFIA3-202ENST00000421230 ADGRL3Q9HAR2 1447 aa24.17■■□□□ 1.46
PPFIA3-202ENST00000421230 RNF123Q5XPI4 1314 aa24.17■■□□□ 1.46
PPFIA3-202ENST00000421230 TOPAZ1Q8N9V7 1692 aa24.17■■□□□ 1.46
PPFIA3-202ENST00000421230 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
PPFIA3-202ENST00000421230 CPSF1Q10570 1443 aaKnown RBP24.16■■□□□ 1.46
PPFIA3-202ENST00000421230 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
PPFIA3-202ENST00000421230 FMN2Q9NZ56 1722 aa24.16■■□□□ 1.46
PPFIA3-202ENST00000421230 NOP58Q9Y2X3 529 aaKnown RBP24.15■■□□□ 1.46
PPFIA3-202ENST00000421230 NLRP13Q86W25 1043 aa24.15■■□□□ 1.46
PPFIA3-202ENST00000421230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.14■■□□□ 1.46
PPFIA3-202ENST00000421230 PMFBP1Q8TBY8 1022 aa24.14■■□□□ 1.46
PPFIA3-202ENST00000421230 PPP2R1AP30153 589 aa24.14■■□□□ 1.45
PPFIA3-202ENST00000421230 DEKP35659 375 aaKnown RBP24.14■■□□□ 1.45
PPFIA3-202ENST00000421230 ACEP12821 1306 aa24.13■■□□□ 1.45
PPFIA3-202ENST00000421230 ITSN1Q15811 1721 aa24.13■■□□□ 1.45
PPFIA3-202ENST00000421230 PLEKHG3A1L390 1219 aa24.12■■□□□ 1.45
PPFIA3-202ENST00000421230 MORC1Q86VD1 984 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms