RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 MROH1Q8NDA8 1641 aa20.41■□□□□ 0.86
TRIM13-204ENST00000420995 NEURL4Q96JN8 1562 aa20.4■□□□□ 0.86
TRIM13-204ENST00000420995 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
TRIM13-204ENST00000420995 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
TRIM13-204ENST00000420995 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
TRIM13-204ENST00000420995 NOS1P29475 1434 aa20.39■□□□□ 0.85
TRIM13-204ENST00000420995 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
TRIM13-204ENST00000420995 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
TRIM13-204ENST00000420995 MROH2AA6NES4 1674 aa20.39■□□□□ 0.85
TRIM13-204ENST00000420995 SHPRHQ149N8 1683 aa20.39■□□□□ 0.85
TRIM13-204ENST00000420995 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
TRIM13-204ENST00000420995 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
TRIM13-204ENST00000420995 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
TRIM13-204ENST00000420995 EFCAB6Q5THR3 1501 aa20.37■□□□□ 0.85
TRIM13-204ENST00000420995 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
TRIM13-204ENST00000420995 MYO3AQ8NEV4 1616 aa20.36■□□□□ 0.85
TRIM13-204ENST00000420995 KIDINS220Q9ULH0 1771 aa20.36■□□□□ 0.85
TRIM13-204ENST00000420995 KIF1BO60333 1816 aa20.35■□□□□ 0.85
TRIM13-204ENST00000420995 MTHFSP49914 203 aa20.35■□□□□ 0.85
TRIM13-204ENST00000420995 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.35■□□□□ 0.85
TRIM13-204ENST00000420995 IFT172Q9UG01 1749 aa20.35■□□□□ 0.85
TRIM13-204ENST00000420995 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
TRIM13-204ENST00000420995 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
TRIM13-204ENST00000420995 PMFBP1Q8TBY8 1022 aa20.34■□□□□ 0.85
TRIM13-204ENST00000420995 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
TRIM13-204ENST00000420995 BECN1Q14457 450 aa20.33■□□□□ 0.84
TRIM13-204ENST00000420995 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.84
TRIM13-204ENST00000420995 POGKQ9P215 609 aa20.32■□□□□ 0.84
TRIM13-204ENST00000420995 WDR63Q8IWG1 891 aa20.31■□□□□ 0.84
TRIM13-204ENST00000420995 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
TRIM13-204ENST00000420995 ZNF518AQ6AHZ1 1483 aa20.3■□□□□ 0.84
TRIM13-204ENST00000420995 ADGRB3O60242 1522 aa20.3■□□□□ 0.84
TRIM13-204ENST00000420995 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
TRIM13-204ENST00000420995 TBC1D32Q96NH3 1257 aa20.28■□□□□ 0.84
TRIM13-204ENST00000420995 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
TRIM13-204ENST00000420995 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
TRIM13-204ENST00000420995 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
TRIM13-204ENST00000420995 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM13-204ENST00000420995 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
TRIM13-204ENST00000420995 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
TRIM13-204ENST00000420995 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
TRIM13-204ENST00000420995 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM13-204ENST00000420995 ADGRB1O14514 1584 aa20.27■□□□□ 0.83
TRIM13-204ENST00000420995 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
TRIM13-204ENST00000420995 AAMPQ13685 434 aa20.26■□□□□ 0.83
TRIM13-204ENST00000420995 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
TRIM13-204ENST00000420995 TBC1D2Q9BYX2 928 aa20.25■□□□□ 0.83
TRIM13-204ENST00000420995 RWDD1Q9H446 243 aaPredicted RBP20.25■□□□□ 0.83
TRIM13-204ENST00000420995 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
TRIM13-204ENST00000420995 TSR2Q969E8 191 aaKnown RBP20.25■□□□□ 0.83
TRIM13-204ENST00000420995 MYH16Q9H6N6 1097 aa20.25■□□□□ 0.83
TRIM13-204ENST00000420995 MVPQ14764 893 aaKnown RBP20.24■□□□□ 0.83
TRIM13-204ENST00000420995 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
TRIM13-204ENST00000420995 NPATQ14207 1427 aa20.24■□□□□ 0.83
TRIM13-204ENST00000420995 ZC3H13Q5T200 1668 aaKnown RBP20.24■□□□□ 0.83
TRIM13-204ENST00000420995 GGT6Q6P531 493 aa20.23■□□□□ 0.83
TRIM13-204ENST00000420995 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
TRIM13-204ENST00000420995 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
TRIM13-204ENST00000420995 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
TRIM13-204ENST00000420995 FRMPD1Q5SYB0 1578 aa20.21■□□□□ 0.83
TRIM13-204ENST00000420995 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
TRIM13-204ENST00000420995 ZMYM3Q14202 1370 aa20.21■□□□□ 0.83
TRIM13-204ENST00000420995 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
TRIM13-204ENST00000420995 POGZQ7Z3K3 1410 aa20.2■□□□□ 0.82
TRIM13-204ENST00000420995 USP32Q8NFA0 1604 aa20.2■□□□□ 0.82
TRIM13-204ENST00000420995 RAPGEF3O95398 923 aa20.2■□□□□ 0.82
TRIM13-204ENST00000420995 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRIM13-204ENST00000420995 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
TRIM13-204ENST00000420995 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
TRIM13-204ENST00000420995 PPLO60437 1756 aa20.19■□□□□ 0.82
TRIM13-204ENST00000420995 ANKRD36BQ8N2N9 1353 aa20.19■□□□□ 0.82
TRIM13-204ENST00000420995 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
TRIM13-204ENST00000420995 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
TRIM13-204ENST00000420995 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
TRIM13-204ENST00000420995 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
TRIM13-204ENST00000420995 TRIM27P14373 513 aa20.17■□□□□ 0.82
TRIM13-204ENST00000420995 U2SURPO15042 1029 aaKnown RBP20.17■□□□□ 0.82
TRIM13-204ENST00000420995 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
TRIM13-204ENST00000420995 ADGRB2O60241 1585 aa20.16■□□□□ 0.82
TRIM13-204ENST00000420995 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
TRIM13-204ENST00000420995 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
TRIM13-204ENST00000420995 ARXQ96QS3 562 aa20.15■□□□□ 0.82
TRIM13-204ENST00000420995 GLI2P10070 1586 aa20.15■□□□□ 0.82
TRIM13-204ENST00000420995 PRKCSHP14314 528 aaPredicted RBP20.14■□□□□ 0.82
TRIM13-204ENST00000420995 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
TRIM13-204ENST00000420995 NSD2O96028 1365 aa20.14■□□□□ 0.81
TRIM13-204ENST00000420995 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
TRIM13-204ENST00000420995 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
TRIM13-204ENST00000420995 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
TRIM13-204ENST00000420995 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
TRIM13-204ENST00000420995 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
TRIM13-204ENST00000420995 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
TRIM13-204ENST00000420995 TMPOP42166 694 aaKnown RBP20.12■□□□□ 0.81
TRIM13-204ENST00000420995 A0A1W2PP64 1363 aa20.12■□□□□ 0.81
TRIM13-204ENST00000420995 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
TRIM13-204ENST00000420995 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
TRIM13-204ENST00000420995 ATF7IPQ6VMQ6 1270 aa20.1■□□□□ 0.81
TRIM13-204ENST00000420995 NOB1Q9ULX3 412 aaKnown RBP20.1■□□□□ 0.81
TRIM13-204ENST00000420995 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
TRIM13-204ENST00000420995 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms