RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 YTHDC2Q9H6S0 1430 aaKnown RBP11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 ROBO1Q9Y6N7 1651 aa11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 ATF3P18847 181 aa11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
SEMA3F-204ENST00000420831 MST1RQ04912 1400 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 ABCC11Q96J66 1382 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
SEMA3F-204ENST00000420831 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 TECPR2O15040 1411 aa11.93□□□□□ -0.5
SEMA3F-204ENST00000420831 PRAM1Q96QH2 718 aa11.92□□□□□ -0.5
SEMA3F-204ENST00000420831 C1orf167Q5SNV9 1468 aa11.9□□□□□ -0.5
SEMA3F-204ENST00000420831 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
SEMA3F-204ENST00000420831 DCCP43146 1447 aa11.89□□□□□ -0.51
SEMA3F-204ENST00000420831 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
SEMA3F-204ENST00000420831 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
SEMA3F-204ENST00000420831 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
SEMA3F-204ENST00000420831 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
SEMA3F-204ENST00000420831 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
SEMA3F-204ENST00000420831 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
SEMA3F-204ENST00000420831 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
SEMA3F-204ENST00000420831 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
SEMA3F-204ENST00000420831 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-204ENST00000420831 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
SEMA3F-204ENST00000420831 POGKQ9P215 609 aa11.85□□□□□ -0.51
SEMA3F-204ENST00000420831 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
SEMA3F-204ENST00000420831 PHLPP1O60346 1717 aa11.84□□□□□ -0.51
SEMA3F-204ENST00000420831 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
SEMA3F-204ENST00000420831 LAMC1P11047 1609 aa11.84□□□□□ -0.51
SEMA3F-204ENST00000420831 AHDC1Q5TGY3 1603 aaPredicted RBP11.84□□□□□ -0.51
SEMA3F-204ENST00000420831 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
SEMA3F-204ENST00000420831 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
SEMA3F-204ENST00000420831 CDC42BPGQ6DT37 1551 aa11.83□□□□□ -0.52
SEMA3F-204ENST00000420831 FOXO3O43524 673 aa11.82□□□□□ -0.52
SEMA3F-204ENST00000420831 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
SEMA3F-204ENST00000420831 LRP6O75581 1613 aa11.82□□□□□ -0.52
SEMA3F-204ENST00000420831 JCADQ9P266 1359 aa11.8□□□□□ -0.52
SEMA3F-204ENST00000420831 NHSL1Q5SYE7 1610 aa11.8□□□□□ -0.52
SEMA3F-204ENST00000420831 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
SEMA3F-204ENST00000420831 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
SEMA3F-204ENST00000420831 USP32Q8NFA0 1604 aa11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
SEMA3F-204ENST00000420831 PXDNQ92626 1479 aa11.78□□□□□ -0.52
SEMA3F-204ENST00000420831 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
SEMA3F-204ENST00000420831 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
SEMA3F-204ENST00000420831 POTEAQ6S8J7 498 aa11.77□□□□□ -0.53
SEMA3F-204ENST00000420831 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
SEMA3F-204ENST00000420831 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
SEMA3F-204ENST00000420831 TRPM1Q7Z4N2 1603 aa11.77□□□□□ -0.53
SEMA3F-204ENST00000420831 TONSLQ96HA7 1378 aa11.77□□□□□ -0.53
SEMA3F-204ENST00000420831 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
SEMA3F-204ENST00000420831 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
SEMA3F-204ENST00000420831 KIAA1210Q9ULL0 1709 aa11.76□□□□□ -0.53
SEMA3F-204ENST00000420831 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
SEMA3F-204ENST00000420831 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 RGPD8O14715 1765 aaPredicted RBP11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 KRT28Q7Z3Y7 464 aa11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
SEMA3F-204ENST00000420831 NPHP3Q7Z494 1330 aa11.74□□□□□ -0.53
SEMA3F-204ENST00000420831 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
SEMA3F-204ENST00000420831 ADAMTS2O95450 1211 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 ATP7BP35670 1465 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 CABLES1Q8TDN4 633 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
SEMA3F-204ENST00000420831 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
SEMA3F-204ENST00000420831 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
SEMA3F-204ENST00000420831 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
SEMA3F-204ENST00000420831 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
SEMA3F-204ENST00000420831 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
SEMA3F-204ENST00000420831 FKBP8Q14318 412 aa11.71□□□□□ -0.53
SEMA3F-204ENST00000420831 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
SEMA3F-204ENST00000420831 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
SEMA3F-204ENST00000420831 PSME1Q06323 249 aa11.7□□□□□ -0.54
SEMA3F-204ENST00000420831 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
SEMA3F-204ENST00000420831 ACEP12821 1306 aa11.69□□□□□ -0.54
SEMA3F-204ENST00000420831 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-204ENST00000420831 MEX3CQ5U5Q3 659 aaKnown RBP11.69□□□□□ -0.54
SEMA3F-204ENST00000420831 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
SEMA3F-204ENST00000420831 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
SEMA3F-204ENST00000420831 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
SEMA3F-204ENST00000420831 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
SEMA3F-204ENST00000420831 AFF2P51816 1311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms