RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
SNCA-206ENST00000420646 FBLN1P23142 703 aa11.67□□□□□ -0.54
SNCA-206ENST00000420646 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
SNCA-206ENST00000420646 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
SNCA-206ENST00000420646 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
SNCA-206ENST00000420646 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
SNCA-206ENST00000420646 TMEM131LA2VDJ0 1609 aa11.67□□□□□ -0.54
SNCA-206ENST00000420646 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
SNCA-206ENST00000420646 MTHFSP49914 203 aa11.66□□□□□ -0.54
SNCA-206ENST00000420646 CLTCQ00610 1675 aaKnown RBP11.66□□□□□ -0.54
SNCA-206ENST00000420646 ZMYM3Q14202 1370 aa11.66□□□□□ -0.54
SNCA-206ENST00000420646 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
SNCA-206ENST00000420646 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
SNCA-206ENST00000420646 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 CDK19Q9BWU1 502 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 KIF13AQ9H1H9 1805 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
SNCA-206ENST00000420646 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
SNCA-206ENST00000420646 ZC3H13Q5T200 1668 aaKnown RBP11.63□□□□□ -0.55
SNCA-206ENST00000420646 MYO3AQ8NEV4 1616 aa11.63□□□□□ -0.55
SNCA-206ENST00000420646 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
SNCA-206ENST00000420646 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
SNCA-206ENST00000420646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNCA-206ENST00000420646 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
SNCA-206ENST00000420646 A2ML1A8K2U0 1454 aa11.62□□□□□ -0.55
SNCA-206ENST00000420646 SKAP1Q86WV1 359 aa11.62□□□□□ -0.55
SNCA-206ENST00000420646 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
SNCA-206ENST00000420646 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
SNCA-206ENST00000420646 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
SNCA-206ENST00000420646 RIMS2Q9UQ26 1411 aa11.62□□□□□ -0.55
SNCA-206ENST00000420646 PTPRMP28827 1452 aa11.61□□□□□ -0.55
SNCA-206ENST00000420646 ZFYVE9O95405 1425 aa11.61□□□□□ -0.55
SNCA-206ENST00000420646 METP08581 1390 aa11.61□□□□□ -0.55
SNCA-206ENST00000420646 ZNF521Q96K83 1311 aa11.61□□□□□ -0.55
SNCA-206ENST00000420646 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
SNCA-206ENST00000420646 FYB1O15117 783 aa11.6□□□□□ -0.55
SNCA-206ENST00000420646 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
SNCA-206ENST00000420646 PPM1GO15355 546 aaPredicted RBP11.6□□□□□ -0.55
SNCA-206ENST00000420646 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
SNCA-206ENST00000420646 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
SNCA-206ENST00000420646 AGLP35573 1532 aa11.59□□□□□ -0.55
SNCA-206ENST00000420646 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
SNCA-206ENST00000420646 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNCA-206ENST00000420646 SLC26A8Q96RN1 970 aa11.59□□□□□ -0.55
SNCA-206ENST00000420646 SLFN5Q08AF3 891 aa11.58□□□□□ -0.56
SNCA-206ENST00000420646 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
SNCA-206ENST00000420646 BCAR3O75815 825 aa11.58□□□□□ -0.56
SNCA-206ENST00000420646 LTKP29376 864 aa11.58□□□□□ -0.56
SNCA-206ENST00000420646 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
SNCA-206ENST00000420646 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
SNCA-206ENST00000420646 ARHGEF40Q8TER5 1519 aa11.57□□□□□ -0.56
SNCA-206ENST00000420646 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
SNCA-206ENST00000420646 WWC1Q8IX03 1113 aa11.56□□□□□ -0.56
SNCA-206ENST00000420646 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
SNCA-206ENST00000420646 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
SNCA-206ENST00000420646 TNRQ92752 1358 aa11.55□□□□□ -0.56
SNCA-206ENST00000420646 REREQ9P2R6 1566 aa11.55□□□□□ -0.56
SNCA-206ENST00000420646 CD163L1Q9NR16 1453 aa11.55□□□□□ -0.56
SNCA-206ENST00000420646 INSRP06213 1382 aa11.54□□□□□ -0.56
SNCA-206ENST00000420646 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
SNCA-206ENST00000420646 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
SNCA-206ENST00000420646 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 ABCC11Q96J66 1382 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 RUNDC1Q96C34 613 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
SNCA-206ENST00000420646 BCL2L13Q9BXK5 485 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 NME9Q86XW9 330 aa11.53□□□□□ -0.56
SNCA-206ENST00000420646 WASLO00401 505 aaPredicted RBP11.52□□□□□ -0.56
SNCA-206ENST00000420646 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.56
SNCA-206ENST00000420646 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
SNCA-206ENST00000420646 TMEM2Q9UHN6 1383 aa11.51□□□□□ -0.57
SNCA-206ENST00000420646 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNCA-206ENST00000420646 E9PSI1 815 aa11.51□□□□□ -0.57
SNCA-206ENST00000420646 MSH5O43196 834 aa11.51□□□□□ -0.57
SNCA-206ENST00000420646 SOX12O15370 315 aa11.5□□□□□ -0.57
SNCA-206ENST00000420646 EMILIN1Q9Y6C2 1016 aa11.5□□□□□ -0.57
SNCA-206ENST00000420646 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
SNCA-206ENST00000420646 FRAT1Q92837 279 aaPredicted RBP11.5□□□□□ -0.57
SNCA-206ENST00000420646 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
SNCA-206ENST00000420646 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
SNCA-206ENST00000420646 SHPRHQ149N8 1683 aa11.5□□□□□ -0.57
SNCA-206ENST00000420646 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
SNCA-206ENST00000420646 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
SNCA-206ENST00000420646 HMOX1P09601 288 aa11.49□□□□□ -0.57
SNCA-206ENST00000420646 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
SNCA-206ENST00000420646 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
SNCA-206ENST00000420646 POLKQ9UBT6 870 aa11.49□□□□□ -0.57
SNCA-206ENST00000420646 PPIP5K1Q6PFW1 1433 aa11.48□□□□□ -0.57
SNCA-206ENST00000420646 NLRP1Q9C000 1473 aa11.48□□□□□ -0.57
SNCA-206ENST00000420646 HSPA2P54652 639 aa11.48□□□□□ -0.57
SNCA-206ENST00000420646 PANK1Q8TE04 598 aa11.48□□□□□ -0.57
SNCA-206ENST00000420646 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
SNCA-206ENST00000420646 NKTRP30414 1462 aaKnown RBP11.47□□□□□ -0.57
SNCA-206ENST00000420646 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
SNCA-206ENST00000420646 NSD2O96028 1365 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms