RNA–Protein interactions for RNA: ENST00000420536.1

RPL3-204, Transcript of ribosomal protein L3, humanhuman

TSL 5

Gene RPL3, Length 711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-204ENST00000420536 POGKQ9P215 609 aa13.35□□□□□ -0.27
RPL3-204ENST00000420536 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
RPL3-204ENST00000420536 COL16A1Q07092 1604 aaPredicted RBP13.33□□□□□ -0.28
RPL3-204ENST00000420536 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
RPL3-204ENST00000420536 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
RPL3-204ENST00000420536 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
RPL3-204ENST00000420536 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
RPL3-204ENST00000420536 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
RPL3-204ENST00000420536 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
RPL3-204ENST00000420536 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
RPL3-204ENST00000420536 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
RPL3-204ENST00000420536 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
RPL3-204ENST00000420536 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
RPL3-204ENST00000420536 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
RPL3-204ENST00000420536 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
RPL3-204ENST00000420536 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
RPL3-204ENST00000420536 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
RPL3-204ENST00000420536 SAFB2Q14151 953 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPL3-204ENST00000420536 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
RPL3-204ENST00000420536 LAMC1P11047 1609 aa13.3□□□□□ -0.28
RPL3-204ENST00000420536 FOXO3O43524 673 aa13.29□□□□□ -0.28
RPL3-204ENST00000420536 POTEAQ6S8J7 498 aa13.29□□□□□ -0.28
RPL3-204ENST00000420536 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
RPL3-204ENST00000420536 PSME1Q06323 249 aa13.27□□□□□ -0.29
RPL3-204ENST00000420536 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
RPL3-204ENST00000420536 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
RPL3-204ENST00000420536 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
RPL3-204ENST00000420536 NHSL1Q5SYE7 1610 aa13.26□□□□□ -0.29
RPL3-204ENST00000420536 KNDC1Q76NI1 1749 aa13.26□□□□□ -0.29
RPL3-204ENST00000420536 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
RPL3-204ENST00000420536 LRP6O75581 1613 aa13.25□□□□□ -0.29
RPL3-204ENST00000420536 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
RPL3-204ENST00000420536 MINK1Q8N4C8 1332 aaPredicted RBP13.24□□□□□ -0.29
RPL3-204ENST00000420536 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
RPL3-204ENST00000420536 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
RPL3-204ENST00000420536 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
RPL3-204ENST00000420536 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
RPL3-204ENST00000420536 AFF2P51816 1311 aa13.23□□□□□ -0.29
RPL3-204ENST00000420536 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
RPL3-204ENST00000420536 RXRBP28702 533 aa13.23□□□□□ -0.29
RPL3-204ENST00000420536 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
RPL3-204ENST00000420536 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
RPL3-204ENST00000420536 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
RPL3-204ENST00000420536 WASLO00401 505 aaPredicted RBP13.22□□□□□ -0.29
RPL3-204ENST00000420536 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
RPL3-204ENST00000420536 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
RPL3-204ENST00000420536 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
RPL3-204ENST00000420536 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
RPL3-204ENST00000420536 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
RPL3-204ENST00000420536 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
RPL3-204ENST00000420536 PXDNQ92626 1479 aa13.2□□□□□ -0.3
RPL3-204ENST00000420536 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
RPL3-204ENST00000420536 PMFBP1Q8TBY8 1022 aa13.19□□□□□ -0.3
RPL3-204ENST00000420536 GPRASP1Q5JY77 1395 aa13.19□□□□□ -0.3
RPL3-204ENST00000420536 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
RPL3-204ENST00000420536 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
RPL3-204ENST00000420536 NGDNQ8NEJ9 315 aaKnown RBP13.18□□□□□ -0.3
RPL3-204ENST00000420536 USP21Q9UK80 565 aa13.18□□□□□ -0.3
RPL3-204ENST00000420536 FMN2Q9NZ56 1722 aa13.18□□□□□ -0.3
RPL3-204ENST00000420536 SBNO1A3KN83 1393 aa13.18□□□□□ -0.3
RPL3-204ENST00000420536 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
RPL3-204ENST00000420536 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
RPL3-204ENST00000420536 ARHGEF10O15013 1369 aa13.17□□□□□ -0.3
RPL3-204ENST00000420536 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
RPL3-204ENST00000420536 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
RPL3-204ENST00000420536 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
RPL3-204ENST00000420536 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
RPL3-204ENST00000420536 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
RPL3-204ENST00000420536 TNS3Q68CZ2 1445 aa13.15□□□□□ -0.3
RPL3-204ENST00000420536 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
RPL3-204ENST00000420536 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
RPL3-204ENST00000420536 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
RPL3-204ENST00000420536 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
RPL3-204ENST00000420536 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
RPL3-204ENST00000420536 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
RPL3-204ENST00000420536 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
RPL3-204ENST00000420536 ROCK2O75116 1388 aaKnown RBP13.12□□□□□ -0.31
RPL3-204ENST00000420536 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
RPL3-204ENST00000420536 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
RPL3-204ENST00000420536 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
RPL3-204ENST00000420536 PLEKHG3A1L390 1219 aa13.1□□□□□ -0.31
RPL3-204ENST00000420536 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
RPL3-204ENST00000420536 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
RPL3-204ENST00000420536 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
RPL3-204ENST00000420536 NBPF8Q3BBV2 869 aa13.08□□□□□ -0.32
RPL3-204ENST00000420536 ACEP12821 1306 aa13.08□□□□□ -0.32
RPL3-204ENST00000420536 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
RPL3-204ENST00000420536 ATRNO75882 1429 aa13.07□□□□□ -0.32
RPL3-204ENST00000420536 GJD4Q96KN9 370 aaPredicted RBP13.07□□□□□ -0.32
RPL3-204ENST00000420536 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
RPL3-204ENST00000420536 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
RPL3-204ENST00000420536 ATP7BP35670 1465 aa13.07□□□□□ -0.32
RPL3-204ENST00000420536 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
RPL3-204ENST00000420536 BCL9LQ86UU0 1499 aa13.06□□□□□ -0.32
RPL3-204ENST00000420536 POLR3AO14802 1390 aaPredicted RBP13.06□□□□□ -0.32
RPL3-204ENST00000420536 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPL3-204ENST00000420536 CCDC9Q9Y3X0 531 aaKnown RBP13.05□□□□□ -0.32
RPL3-204ENST00000420536 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
RPL3-204ENST00000420536 SLIT2O94813 1529 aa13.04□□□□□ -0.32
RPL3-204ENST00000420536 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms