RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 CGNL1Q0VF96 1302 aa27.18■■□□□ 1.94
SSUH2-205ENST00000420394 SLC12A5Q9H2X9 1139 aa27.17■■□□□ 1.94
SSUH2-205ENST00000420394 STK26Q9P289 416 aa27.17■■□□□ 1.94
SSUH2-205ENST00000420394 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
SSUH2-205ENST00000420394 POLR3AO14802 1390 aaPredicted RBP27.14■■□□□ 1.93
SSUH2-205ENST00000420394 TMEM2Q9UHN6 1383 aa27.14■■□□□ 1.93
SSUH2-205ENST00000420394 UBR1Q8IWV7 1749 aa27.14■■□□□ 1.93
SSUH2-205ENST00000420394 NRXN3Q9Y4C0 1643 aa27.13■■□□□ 1.93
SSUH2-205ENST00000420394 SIRT1Q96EB6 747 aa27.12■■□□□ 1.93
SSUH2-205ENST00000420394 RNF123Q5XPI4 1314 aa27.12■■□□□ 1.93
SSUH2-205ENST00000420394 SRPK2P78362 688 aaKnown RBP27.11■■□□□ 1.93
SSUH2-205ENST00000420394 MORC1Q86VD1 984 aa27.1■■□□□ 1.93
SSUH2-205ENST00000420394 NGEFQ8N5V2 710 aa27.1■■□□□ 1.93
SSUH2-205ENST00000420394 ADAMTS8Q9UP79 889 aa27.1■■□□□ 1.93
SSUH2-205ENST00000420394 KNDC1Q76NI1 1749 aa27.1■■□□□ 1.93
SSUH2-205ENST00000420394 TECPR2O15040 1411 aa27.1■■□□□ 1.93
SSUH2-205ENST00000420394 BCANQ96GW7 911 aa27.09■■□□□ 1.93
SSUH2-205ENST00000420394 CABP2Q9NPB3 220 aa27.09■■□□□ 1.93
SSUH2-205ENST00000420394 TERF2IPQ9NYB0 399 aa27.09■■□□□ 1.93
SSUH2-205ENST00000420394 FAM135BQ49AJ0 1406 aa27.08■■□□□ 1.93
SSUH2-205ENST00000420394 SAFB2Q14151 953 aaKnown RBP eCLIP27.06■■□□□ 1.92
SSUH2-205ENST00000420394 MED14O60244 1454 aa27.05■■□□□ 1.92
SSUH2-205ENST00000420394 MINK1Q8N4C8 1332 aaPredicted RBP27.05■■□□□ 1.92
SSUH2-205ENST00000420394 TRHP20396 242 aaPredicted RBP27.04■■□□□ 1.92
SSUH2-205ENST00000420394 PPP4R2Q9NY27 417 aa27.04■■□□□ 1.92
SSUH2-205ENST00000420394 A0A1W2PP64 1363 aa27.04■■□□□ 1.92
SSUH2-205ENST00000420394 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
SSUH2-205ENST00000420394 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
SSUH2-205ENST00000420394 CPS1P31327 1500 aa27.03■■□□□ 1.92
SSUH2-205ENST00000420394 C3P01024 1663 aa27.02■■□□□ 1.92
SSUH2-205ENST00000420394 HDGFL2Q7Z4V5 671 aaPredicted RBP27.01■■□□□ 1.92
SSUH2-205ENST00000420394 ATP7BP35670 1465 aa27.01■■□□□ 1.91
SSUH2-205ENST00000420394 CDK19Q9BWU1 502 aa27.01■■□□□ 1.91
SSUH2-205ENST00000420394 SLIT1O75093 1534 aa26.99■■□□□ 1.91
SSUH2-205ENST00000420394 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
SSUH2-205ENST00000420394 METP08581 1390 aa26.98■■□□□ 1.91
SSUH2-205ENST00000420394 CD163L1Q9NR16 1453 aa26.97■■□□□ 1.91
SSUH2-205ENST00000420394 ARHGAP23Q9P227 1491 aa26.97■■□□□ 1.91
SSUH2-205ENST00000420394 EID1Q9Y6B2 187 aa26.96■■□□□ 1.91
SSUH2-205ENST00000420394 ADAMTS13Q76LX8 1427 aa26.95■■□□□ 1.9
SSUH2-205ENST00000420394 ANKRD26Q9UPS8 1709 aa26.95■■□□□ 1.9
SSUH2-205ENST00000420394 SENP3Q9H4L4 574 aaPredicted RBP26.94■■□□□ 1.9
SSUH2-205ENST00000420394 IRX6P78412 446 aaPredicted RBP26.94■■□□□ 1.9
SSUH2-205ENST00000420394 RCAN3Q9UKA8 241 aa26.94■■□□□ 1.9
SSUH2-205ENST00000420394 ZNF521Q96K83 1311 aa26.92■■□□□ 1.9
SSUH2-205ENST00000420394 SALL2Q9Y467 1007 aaPredicted RBP26.92■■□□□ 1.9
SSUH2-205ENST00000420394 PLEKHH1Q9ULM0 1364 aa26.92■■□□□ 1.9
SSUH2-205ENST00000420394 WASLO00401 505 aaPredicted RBP26.91■■□□□ 1.9
SSUH2-205ENST00000420394 WAPLQ7Z5K2 1190 aa26.9■■□□□ 1.9
SSUH2-205ENST00000420394 SHPRHQ149N8 1683 aa26.9■■□□□ 1.9
SSUH2-205ENST00000420394 DIP2AQ14689 1571 aa26.9■■□□□ 1.9
SSUH2-205ENST00000420394 NCBP3Q53F19 620 aaKnown RBP26.89■■□□□ 1.9
SSUH2-205ENST00000420394 THEMISQ8N1K5 641 aaPredicted RBP26.89■■□□□ 1.9
SSUH2-205ENST00000420394 ADGRB2O60241 1585 aa26.89■■□□□ 1.89
SSUH2-205ENST00000420394 GOLGA2Q08379 1002 aa26.88■■□□□ 1.89
SSUH2-205ENST00000420394 TXNDC2Q86VQ3 553 aa26.88■■□□□ 1.89
SSUH2-205ENST00000420394 MTHFSP49914 203 aa26.87■■□□□ 1.89
SSUH2-205ENST00000420394 SENP3-EIF4A1A0A087X0R7 540 aa26.87■■□□□ 1.89
SSUH2-205ENST00000420394 CEBPAP49715 358 aaPredicted RBP26.87■■□□□ 1.89
SSUH2-205ENST00000420394 RRP1P56182 461 aaKnown RBP26.87■■□□□ 1.89
SSUH2-205ENST00000420394 CABP1Q9NZU7 370 aa26.87■■□□□ 1.89
SSUH2-205ENST00000420394 CDCA7LQ96GN5 454 aa26.85■■□□□ 1.89
SSUH2-205ENST00000420394 KIF20BQ96Q89 1820 aa26.85■■□□□ 1.89
SSUH2-205ENST00000420394 FYB1O15117 783 aa26.84■■□□□ 1.89
SSUH2-205ENST00000420394 LTKP29376 864 aa26.84■■□□□ 1.89
SSUH2-205ENST00000420394 CPSF1Q10570 1443 aaKnown RBP26.83■■□□□ 1.89
SSUH2-205ENST00000420394 EDC4Q6P2E9 1401 aaKnown RBP26.83■■□□□ 1.89
SSUH2-205ENST00000420394 TNNT2P45379 298 aaPredicted RBP26.83■■□□□ 1.88
SSUH2-205ENST00000420394 TBX22Q9Y458 520 aa26.83■■□□□ 1.88
SSUH2-205ENST00000420394 RUNDC1Q96C34 613 aa26.82■■□□□ 1.88
SSUH2-205ENST00000420394 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
SSUH2-205ENST00000420394 APAF1O14727 1248 aa26.81■■□□□ 1.88
SSUH2-205ENST00000420394 CDC42BPGQ6DT37 1551 aa26.81■■□□□ 1.88
SSUH2-205ENST00000420394 CCDC61Q9Y6R9 512 aa26.8■■□□□ 1.88
SSUH2-205ENST00000420394 PTCH1Q13635 1447 aa26.8■■□□□ 1.88
SSUH2-205ENST00000420394 ROBO2Q9HCK4 1378 aa26.8■■□□□ 1.88
SSUH2-205ENST00000420394 CCDC146Q8IYE0 955 aa26.79■■□□□ 1.88
SSUH2-205ENST00000420394 GGNBP2Q9H3C7 697 aa26.79■■□□□ 1.88
SSUH2-205ENST00000420394 E9PSI1 815 aa26.78■■□□□ 1.88
SSUH2-205ENST00000420394 DUSP27Q5VZP5 1158 aa26.78■■□□□ 1.88
SSUH2-205ENST00000420394 SLFN5Q08AF3 891 aa26.77■■□□□ 1.88
SSUH2-205ENST00000420394 TRMT2AQ8IZ69 625 aaKnown RBP26.77■■□□□ 1.88
SSUH2-205ENST00000420394 NUDT16Q96DE0 195 aaKnown RBP26.77■■□□□ 1.88
SSUH2-205ENST00000420394 IQSEC2Q5JU85 1478 aa26.77■■□□□ 1.88
SSUH2-205ENST00000420394 CEP170BQ9Y4F5 1589 aaPredicted RBP26.77■■□□□ 1.88
SSUH2-205ENST00000420394 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
SSUH2-205ENST00000420394 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
SSUH2-205ENST00000420394 COL3A1P02461 1466 aaPredicted RBP26.74■■□□□ 1.87
SSUH2-205ENST00000420394 CCDC27Q2M243 656 aa26.74■■□□□ 1.87
SSUH2-205ENST00000420394 PNPLA6Q8IY17 1366 aa26.74■■□□□ 1.87
SSUH2-205ENST00000420394 MON2Q7Z3U7 1717 aa26.73■■□□□ 1.87
SSUH2-205ENST00000420394 TSHZ2Q9NRE2 1034 aa26.72■■□□□ 1.87
SSUH2-205ENST00000420394 PNNQ9H307 717 aaKnown RBP26.72■■□□□ 1.87
SSUH2-205ENST00000420394 NKTRP30414 1462 aaKnown RBP26.72■■□□□ 1.87
SSUH2-205ENST00000420394 RIMS1Q86UR5 1692 aaKnown RBP26.71■■□□□ 1.87
SSUH2-205ENST00000420394 PTPRUQ92729 1446 aa26.71■■□□□ 1.87
SSUH2-205ENST00000420394 AKAP12Q02952 1782 aa26.7■■□□□ 1.87
SSUH2-205ENST00000420394 ITSN1Q15811 1721 aa26.7■■□□□ 1.86
SSUH2-205ENST00000420394 ZNF142P52746 1687 aaPredicted RBP26.7■■□□□ 1.86
SSUH2-205ENST00000420394 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms