RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SOS2Q07890 1332 aaPredicted RBP15.63■□□□□ 0.09
TNFAIP3-202ENST00000420009 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
TNFAIP3-202ENST00000420009 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
TNFAIP3-202ENST00000420009 KIF1BO60333 1816 aa15.6■□□□□ 0.09
TNFAIP3-202ENST00000420009 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
TNFAIP3-202ENST00000420009 NGLY1Q96IV0 654 aa15.6■□□□□ 0.09
TNFAIP3-202ENST00000420009 ATAD2Q6PL18 1390 aa15.6■□□□□ 0.09
TNFAIP3-202ENST00000420009 ORAI2Q96SN7 254 aa15.59■□□□□ 0.09
TNFAIP3-202ENST00000420009 EP400Q96L91 3159 aa15.59■□□□□ 0.09
TNFAIP3-202ENST00000420009 MYOM2P54296 1465 aa15.59■□□□□ 0.09
TNFAIP3-202ENST00000420009 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
TNFAIP3-202ENST00000420009 HFM1A2PYH4 1435 aa15.58■□□□□ 0.08
TNFAIP3-202ENST00000420009 ATRNO75882 1429 aa15.58■□□□□ 0.08
TNFAIP3-202ENST00000420009 USP21Q9UK80 565 aa15.57■□□□□ 0.08
TNFAIP3-202ENST00000420009 NAIPQ13075 1403 aa15.57■□□□□ 0.08
TNFAIP3-202ENST00000420009 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
TNFAIP3-202ENST00000420009 TRPC5Q9UL62 973 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-202ENST00000420009 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
TNFAIP3-202ENST00000420009 PXDNQ92626 1479 aa15.54■□□□□ 0.08
TNFAIP3-202ENST00000420009 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
TNFAIP3-202ENST00000420009 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
TNFAIP3-202ENST00000420009 PPLO60437 1756 aa15.53■□□□□ 0.08
TNFAIP3-202ENST00000420009 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.08
TNFAIP3-202ENST00000420009 NPHP3Q7Z494 1330 aa15.51■□□□□ 0.07
TNFAIP3-202ENST00000420009 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
TNFAIP3-202ENST00000420009 MARF1Q9Y4F3 1742 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-202ENST00000420009 TECPR2O15040 1411 aa15.5■□□□□ 0.07
TNFAIP3-202ENST00000420009 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
TNFAIP3-202ENST00000420009 PPARGC1BQ86YN6 1023 aaKnown RBP15.48■□□□□ 0.07
TNFAIP3-202ENST00000420009 ESCO1Q5FWF5 840 aa15.47■□□□□ 0.07
TNFAIP3-202ENST00000420009 CCDC125Q86Z20 511 aa15.46■□□□□ 0.07
TNFAIP3-202ENST00000420009 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
TNFAIP3-202ENST00000420009 SLIT2O94813 1529 aa15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 FOXO3O43524 673 aa15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 LRPPRCP42704 1394 aaKnown RBP15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 KNDC1Q76NI1 1749 aa15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 GLI3P10071 1580 aa15.45■□□□□ 0.06
TNFAIP3-202ENST00000420009 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
TNFAIP3-202ENST00000420009 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 RALGAPBQ86X10 1494 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 USP32Q8NFA0 1604 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
TNFAIP3-202ENST00000420009 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
TNFAIP3-202ENST00000420009 CCDC144AA2RUR9 1427 aa15.42■□□□□ 0.06
TNFAIP3-202ENST00000420009 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
TNFAIP3-202ENST00000420009 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
TNFAIP3-202ENST00000420009 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
TNFAIP3-202ENST00000420009 DSG3P32926 999 aa15.41■□□□□ 0.06
TNFAIP3-202ENST00000420009 POTEHQ6S545 545 aa15.41■□□□□ 0.06
TNFAIP3-202ENST00000420009 PIK3C2GO75747 1445 aa15.41■□□□□ 0.06
TNFAIP3-202ENST00000420009 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
TNFAIP3-202ENST00000420009 WAPLQ7Z5K2 1190 aa15.4■□□□□ 0.06
TNFAIP3-202ENST00000420009 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
TNFAIP3-202ENST00000420009 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
TNFAIP3-202ENST00000420009 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
TNFAIP3-202ENST00000420009 STK26Q9P289 416 aa15.38■□□□□ 0.05
TNFAIP3-202ENST00000420009 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
TNFAIP3-202ENST00000420009 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
TNFAIP3-202ENST00000420009 BRWD3Q6RI45 1802 aa15.36■□□□□ 0.05
TNFAIP3-202ENST00000420009 ABCA3Q99758 1704 aa15.35■□□□□ 0.05
TNFAIP3-202ENST00000420009 NWD2Q9ULI1 1742 aa15.35■□□□□ 0.05
TNFAIP3-202ENST00000420009 TMEM132EQ6IEE7 984 aa15.35■□□□□ 0.05
TNFAIP3-202ENST00000420009 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
TNFAIP3-202ENST00000420009 KRT28Q7Z3Y7 464 aa15.34■□□□□ 0.05
TNFAIP3-202ENST00000420009 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.05
TNFAIP3-202ENST00000420009 LRP5O75197 1615 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 VPS72Q15906 364 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 SIRT1Q96EB6 747 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 SBNO1A3KN83 1393 aa15.33■□□□□ 0.04
TNFAIP3-202ENST00000420009 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
TNFAIP3-202ENST00000420009 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
TNFAIP3-202ENST00000420009 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
TNFAIP3-202ENST00000420009 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
TNFAIP3-202ENST00000420009 ARHGEF10O15013 1369 aa15.3■□□□□ 0.04
TNFAIP3-202ENST00000420009 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
TNFAIP3-202ENST00000420009 NRAPQ86VF7 1730 aa15.29■□□□□ 0.04
TNFAIP3-202ENST00000420009 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 ANKARQ7Z5J8 1434 aa15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 CAPN15O75808 1086 aa15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 PSME1Q06323 249 aa15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 SF3B2Q13435 895 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 C14orf93Q9H972 538 aaKnown RBP15.28■□□□□ 0.04
TNFAIP3-202ENST00000420009 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
TNFAIP3-202ENST00000420009 KRT27Q7Z3Y8 459 aa15.27■□□□□ 0.04
TNFAIP3-202ENST00000420009 DLC1Q96QB1 1528 aa15.27■□□□□ 0.03
TNFAIP3-202ENST00000420009 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
TNFAIP3-202ENST00000420009 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
TNFAIP3-202ENST00000420009 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
TNFAIP3-202ENST00000420009 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
TNFAIP3-202ENST00000420009 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
TNFAIP3-202ENST00000420009 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
TNFAIP3-202ENST00000420009 ALS2Q96Q42 1657 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms