RNA–Protein interactions for RNA: ENST00000419721.5

C1GALT1-203, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 3

Gene C1GALT1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-203ENST00000419721 ARHGEF28Q8N1W1 1705 aaKnown RBP30.06■■■□□ 2.4
C1GALT1-203ENST00000419721 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
C1GALT1-203ENST00000419721 TRAK1Q9UPV9 953 aa30.03■■■□□ 2.4
C1GALT1-203ENST00000419721 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
C1GALT1-203ENST00000419721 PRAM1Q96QH2 718 aa30.02■■■□□ 2.4
C1GALT1-203ENST00000419721 C1orf167Q5SNV9 1468 aa30■■■□□ 2.39
C1GALT1-203ENST00000419721 NBPF1Q3BBV0 1214 aa30■■■□□ 2.39
C1GALT1-203ENST00000419721 FMN2Q9NZ56 1722 aa29.99■■■□□ 2.39
C1GALT1-203ENST00000419721 ADGRB2O60241 1585 aa29.98■■■□□ 2.39
C1GALT1-203ENST00000419721 AHDC1Q5TGY3 1603 aaPredicted RBP29.98■■■□□ 2.39
C1GALT1-203ENST00000419721 POGKQ9P215 609 aa29.98■■■□□ 2.39
C1GALT1-203ENST00000419721 PHLPP1O60346 1717 aa29.98■■■□□ 2.39
C1GALT1-203ENST00000419721 BRINP3Q76B58 766 aa29.97■■■□□ 2.39
C1GALT1-203ENST00000419721 NHSL1Q5SYE7 1610 aa29.95■■■□□ 2.38
C1GALT1-203ENST00000419721 SAFB2Q14151 953 aaKnown RBP eCLIP29.94■■■□□ 2.38
C1GALT1-203ENST00000419721 COL16A1Q07092 1604 aaPredicted RBP29.93■■■□□ 2.38
C1GALT1-203ENST00000419721 NBPF8Q3BBV2 869 aa29.93■■■□□ 2.38
C1GALT1-203ENST00000419721 ROCK2O75116 1388 aaKnown RBP29.89■■■□□ 2.37
C1GALT1-203ENST00000419721 GPRASP1Q5JY77 1395 aa29.88■■■□□ 2.37
C1GALT1-203ENST00000419721 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
C1GALT1-203ENST00000419721 ORAI2Q96SN7 254 aa29.86■■■□□ 2.37
C1GALT1-203ENST00000419721 CCER1Q8TC90 406 aaPredicted RBP29.85■■■□□ 2.37
C1GALT1-203ENST00000419721 MINK1Q8N4C8 1332 aaPredicted RBP29.85■■■□□ 2.37
C1GALT1-203ENST00000419721 RGPD8O14715 1765 aaPredicted RBP29.83■■■□□ 2.37
C1GALT1-203ENST00000419721 USP32Q8NFA0 1604 aa29.83■■■□□ 2.37
C1GALT1-203ENST00000419721 NUTM2FA1L443 756 aa29.82■■■□□ 2.36
C1GALT1-203ENST00000419721 HIRIP3Q9BW71 556 aaPredicted RBP29.82■■■□□ 2.36
C1GALT1-203ENST00000419721 TIMELESSQ9UNS1 1208 aa29.82■■■□□ 2.36
C1GALT1-203ENST00000419721 KIF1AQ12756 1690 aa29.82■■■□□ 2.36
C1GALT1-203ENST00000419721 QRICH2Q9H0J4 1663 aa29.82■■■□□ 2.36
C1GALT1-203ENST00000419721 ANKARQ7Z5J8 1434 aa29.81■■■□□ 2.36
C1GALT1-203ENST00000419721 ESCO1Q5FWF5 840 aa29.8■■■□□ 2.36
C1GALT1-203ENST00000419721 TULP4Q9NRJ4 1543 aa29.8■■■□□ 2.36
C1GALT1-203ENST00000419721 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
C1GALT1-203ENST00000419721 CENPJQ9HC77 1338 aaPredicted RBP29.79■■■□□ 2.36
C1GALT1-203ENST00000419721 WASLO00401 505 aaPredicted RBP29.79■■■□□ 2.36
C1GALT1-203ENST00000419721 JCADQ9P266 1359 aa29.77■■■□□ 2.36
C1GALT1-203ENST00000419721 SHPRHQ149N8 1683 aa29.77■■■□□ 2.36
C1GALT1-203ENST00000419721 DDX17Q92841 729 aaKnown RBP29.77■■■□□ 2.36
C1GALT1-203ENST00000419721 MED1Q15648 1581 aaPredicted RBP29.77■■■□□ 2.36
C1GALT1-203ENST00000419721 SOS2Q07890 1332 aaPredicted RBP29.73■■■□□ 2.35
C1GALT1-203ENST00000419721 CARD11Q9BXL7 1154 aa29.73■■■□□ 2.35
C1GALT1-203ENST00000419721 NPHP3Q7Z494 1330 aa29.72■■■□□ 2.35
C1GALT1-203ENST00000419721 PRR36Q9H6K5 1346 aa29.71■■■□□ 2.35
C1GALT1-203ENST00000419721 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
C1GALT1-203ENST00000419721 ATP7BP35670 1465 aa29.71■■■□□ 2.35
C1GALT1-203ENST00000419721 PXDNQ92626 1479 aa29.71■■■□□ 2.35
C1GALT1-203ENST00000419721 LRRC59Q96AG4 307 aaKnown RBP29.69■■■□□ 2.34
C1GALT1-203ENST00000419721 PHF8Q9UPP1 1060 aa29.69■■■□□ 2.34
C1GALT1-203ENST00000419721 FOXO3O43524 673 aa29.68■■■□□ 2.34
C1GALT1-203ENST00000419721 CDK19Q9BWU1 502 aa29.68■■■□□ 2.34
C1GALT1-203ENST00000419721 TOPAZ1Q8N9V7 1692 aa29.68■■■□□ 2.34
C1GALT1-203ENST00000419721 SPATA31A6Q5VVP1 1343 aa29.64■■■□□ 2.34
C1GALT1-203ENST00000419721 PNPLA6Q8IY17 1366 aa29.64■■■□□ 2.33
C1GALT1-203ENST00000419721 SBNO2Q9Y2G9 1366 aa29.64■■■□□ 2.33
C1GALT1-203ENST00000419721 NUDT16Q96DE0 195 aaKnown RBP29.63■■■□□ 2.33
C1GALT1-203ENST00000419721 DISP3Q9P2K9 1392 aa29.62■■■□□ 2.33
C1GALT1-203ENST00000419721 XPCQ01831 940 aaPredicted RBP29.6■■■□□ 2.33
C1GALT1-203ENST00000419721 PMFBP1Q8TBY8 1022 aa29.6■■■□□ 2.33
C1GALT1-203ENST00000419721 COL22A1Q8NFW1 1626 aaPredicted RBP29.6■■■□□ 2.33
C1GALT1-203ENST00000419721 LRP6O75581 1613 aa29.59■■■□□ 2.33
C1GALT1-203ENST00000419721 SRPK2P78362 688 aaKnown RBP29.58■■■□□ 2.33
C1GALT1-203ENST00000419721 EVC2Q86UK5 1308 aa29.58■■■□□ 2.33
C1GALT1-203ENST00000419721 KRT28Q7Z3Y7 464 aa29.57■■■□□ 2.32
C1GALT1-203ENST00000419721 CCDC61Q9Y6R9 512 aa29.57■■■□□ 2.32
C1GALT1-203ENST00000419721 TRPM3Q9HCF6 1732 aaPredicted RBP29.55■■■□□ 2.32
C1GALT1-203ENST00000419721 CABP2Q9NPB3 220 aa29.55■■■□□ 2.32
C1GALT1-203ENST00000419721 SBNO1A3KN83 1393 aa29.53■■■□□ 2.32
C1GALT1-203ENST00000419721 SPATA31A3Q5VYP0 1347 aa29.53■■■□□ 2.32
C1GALT1-203ENST00000419721 PSME1Q06323 249 aa29.53■■■□□ 2.32
C1GALT1-203ENST00000419721 TNS3Q68CZ2 1445 aa29.53■■■□□ 2.32
C1GALT1-203ENST00000419721 NGDNQ8NEJ9 315 aaKnown RBP29.51■■■□□ 2.31
C1GALT1-203ENST00000419721 PPIP5K1Q6PFW1 1433 aa29.51■■■□□ 2.31
C1GALT1-203ENST00000419721 POLR3AO14802 1390 aaPredicted RBP29.51■■■□□ 2.31
C1GALT1-203ENST00000419721 USP47Q96K76 1375 aa29.51■■■□□ 2.31
C1GALT1-203ENST00000419721 PLEKHG3A1L390 1219 aa29.5■■■□□ 2.31
C1GALT1-203ENST00000419721 ALS2Q96Q42 1657 aa29.48■■■□□ 2.31
C1GALT1-203ENST00000419721 ST20-MTHFSA0A0A6YYL1 179 aa29.48■■■□□ 2.31
C1GALT1-203ENST00000419721 PHF23Q9BUL5 403 aaPredicted RBP29.47■■■□□ 2.31
C1GALT1-203ENST00000419721 NUTM2BA6NNL0 878 aaPredicted RBP29.46■■■□□ 2.31
C1GALT1-203ENST00000419721 NUTM2EB1AL46 878 aaPredicted RBP29.46■■■□□ 2.31
C1GALT1-203ENST00000419721 NUTM2AQ8IVF1 878 aaPredicted RBP29.46■■■□□ 2.31
C1GALT1-203ENST00000419721 TESK2Q96S53 571 aa29.46■■■□□ 2.31
C1GALT1-203ENST00000419721 ACEP12821 1306 aa29.45■■■□□ 2.31
C1GALT1-203ENST00000419721 ATAD2Q6PL18 1390 aa29.45■■■□□ 2.31
C1GALT1-203ENST00000419721 ARHGEF10O15013 1369 aa29.43■■■□□ 2.3
C1GALT1-203ENST00000419721 MEX3CQ5U5Q3 659 aaKnown RBP29.42■■■□□ 2.3
C1GALT1-203ENST00000419721 SLC24A1O60721 1099 aa29.41■■■□□ 2.3
C1GALT1-203ENST00000419721 ABCA3Q99758 1704 aa29.41■■■□□ 2.3
C1GALT1-203ENST00000419721 CABP1Q9NZU7 370 aa29.41■■■□□ 2.3
C1GALT1-203ENST00000419721 MARF1Q9Y4F3 1742 aaKnown RBP29.4■■■□□ 2.3
C1GALT1-203ENST00000419721 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
C1GALT1-203ENST00000419721 PUS7Q96PZ0 661 aaKnown RBP29.38■■■□□ 2.29
C1GALT1-203ENST00000419721 AKAP12Q02952 1782 aa29.38■■■□□ 2.29
C1GALT1-203ENST00000419721 LMOD2Q6P5Q4 547 aa29.36■■■□□ 2.29
C1GALT1-203ENST00000419721 CRYBG1Q9Y4K1 1723 aa29.36■■■□□ 2.29
C1GALT1-203ENST00000419721 BRD4O60885 1362 aaPredicted RBP29.36■■■□□ 2.29
C1GALT1-203ENST00000419721 USP6P35125 1406 aa29.35■■■□□ 2.29
C1GALT1-203ENST00000419721 PAK3O75914 559 aaPredicted RBP29.34■■■□□ 2.29
C1GALT1-203ENST00000419721 ADAMTS2O95450 1211 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms