RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
SMG7-204ENST00000419169 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
SMG7-204ENST00000419169 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
SMG7-204ENST00000419169 SLC12A5Q9H2X9 1139 aa22.52■■□□□ 1.2
SMG7-204ENST00000419169 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
SMG7-204ENST00000419169 PPLO60437 1756 aa22.52■■□□□ 1.2
SMG7-204ENST00000419169 TMEM132EQ6IEE7 984 aa22.52■■□□□ 1.2
SMG7-204ENST00000419169 IQSEC2Q5JU85 1478 aa22.51■■□□□ 1.19
SMG7-204ENST00000419169 ADGRB1O14514 1584 aa22.51■■□□□ 1.19
SMG7-204ENST00000419169 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
SMG7-204ENST00000419169 GGT6Q6P531 493 aa22.51■■□□□ 1.19
SMG7-204ENST00000419169 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
SMG7-204ENST00000419169 ZNF518AQ6AHZ1 1483 aa22.51■■□□□ 1.19
SMG7-204ENST00000419169 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
SMG7-204ENST00000419169 USP32Q8NFA0 1604 aa22.49■■□□□ 1.19
SMG7-204ENST00000419169 NPATQ14207 1427 aa22.49■■□□□ 1.19
SMG7-204ENST00000419169 GSE1Q14687 1217 aa22.49■■□□□ 1.19
SMG7-204ENST00000419169 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
SMG7-204ENST00000419169 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
SMG7-204ENST00000419169 MAPK8IP3Q9UPT6 1336 aa22.49■■□□□ 1.19
SMG7-204ENST00000419169 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
SMG7-204ENST00000419169 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
SMG7-204ENST00000419169 FRAT1Q92837 279 aaPredicted RBP22.48■■□□□ 1.19
SMG7-204ENST00000419169 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
SMG7-204ENST00000419169 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
SMG7-204ENST00000419169 CFAP65Q6ZU64 1925 aaKnown RBP22.46■■□□□ 1.19
SMG7-204ENST00000419169 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
SMG7-204ENST00000419169 USP19O94966 1318 aa22.46■■□□□ 1.19
SMG7-204ENST00000419169 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
SMG7-204ENST00000419169 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
SMG7-204ENST00000419169 MTHFSP49914 203 aa22.44■■□□□ 1.18
SMG7-204ENST00000419169 AAMPQ13685 434 aa22.43■■□□□ 1.18
SMG7-204ENST00000419169 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
SMG7-204ENST00000419169 RPGRIP1LQ68CZ1 1315 aa22.42■■□□□ 1.18
SMG7-204ENST00000419169 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
SMG7-204ENST00000419169 CFAP53Q96M91 514 aa22.41■■□□□ 1.18
SMG7-204ENST00000419169 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
SMG7-204ENST00000419169 SEC24BO95487 1268 aa22.4■■□□□ 1.18
SMG7-204ENST00000419169 RLBP1P12271 317 aa22.4■■□□□ 1.18
SMG7-204ENST00000419169 GLI2P10070 1586 aa22.39■■□□□ 1.17
SMG7-204ENST00000419169 HECW2Q9P2P5 1572 aa22.39■■□□□ 1.17
SMG7-204ENST00000419169 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
SMG7-204ENST00000419169 FRAT2O75474 233 aaPredicted RBP22.38■■□□□ 1.17
SMG7-204ENST00000419169 PCDHB15Q9Y5E8 787 aa22.38■■□□□ 1.17
SMG7-204ENST00000419169 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
SMG7-204ENST00000419169 BCL2L13Q9BXK5 485 aa22.38■■□□□ 1.17
SMG7-204ENST00000419169 ANKRD36BQ8N2N9 1353 aa22.37■■□□□ 1.17
SMG7-204ENST00000419169 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
SMG7-204ENST00000419169 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
SMG7-204ENST00000419169 TULP4Q9NRJ4 1543 aa22.37■■□□□ 1.17
SMG7-204ENST00000419169 EVC2Q86UK5 1308 aa22.37■■□□□ 1.17
SMG7-204ENST00000419169 NSD2O96028 1365 aa22.37■■□□□ 1.17
SMG7-204ENST00000419169 NLRP1Q9C000 1473 aa22.36■■□□□ 1.17
SMG7-204ENST00000419169 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
SMG7-204ENST00000419169 ABCC3O15438 1527 aa22.36■■□□□ 1.17
SMG7-204ENST00000419169 ARHGEF28Q8N1W1 1705 aaKnown RBP22.36■■□□□ 1.17
SMG7-204ENST00000419169 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
SMG7-204ENST00000419169 SAFB2Q14151 953 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMG7-204ENST00000419169 ZMYM3Q14202 1370 aa22.34■■□□□ 1.17
SMG7-204ENST00000419169 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
SMG7-204ENST00000419169 CFAP74Q9C0B2 1584 aa22.34■■□□□ 1.17
SMG7-204ENST00000419169 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.17
SMG7-204ENST00000419169 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.172e-8■■□□□ 12.3
SMG7-204ENST00000419169 RTN4Q9NQC3 1192 aaKnown RBP22.33■■□□□ 1.16
SMG7-204ENST00000419169 CAMSAP1Q5T5Y3 1602 aa22.32■■□□□ 1.16
SMG7-204ENST00000419169 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
SMG7-204ENST00000419169 SIGLEC1Q9BZZ2 1709 aa22.32■■□□□ 1.16
SMG7-204ENST00000419169 PDZRN3Q9UPQ7 1066 aa22.32■■□□□ 1.16
SMG7-204ENST00000419169 BECN1Q14457 450 aa22.31■■□□□ 1.16
SMG7-204ENST00000419169 RWDD1Q9H446 243 aaPredicted RBP22.31■■□□□ 1.16
SMG7-204ENST00000419169 CABP2Q9NPB3 220 aa22.31■■□□□ 1.16
SMG7-204ENST00000419169 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
SMG7-204ENST00000419169 PIK3C2BO00750 1634 aa22.3■■□□□ 1.16
SMG7-204ENST00000419169 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
SMG7-204ENST00000419169 RAPGEF3O95398 923 aa22.3■■□□□ 1.16
SMG7-204ENST00000419169 BRPF3Q9ULD4 1205 aa22.3■■□□□ 1.16
SMG7-204ENST00000419169 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
SMG7-204ENST00000419169 ZKSCAN2Q63HK3 967 aa22.27■■□□□ 1.16
SMG7-204ENST00000419169 STK26Q9P289 416 aa22.27■■□□□ 1.16
SMG7-204ENST00000419169 UPF2Q9HAU5 1272 aaKnown RBP22.26■■□□□ 1.15
SMG7-204ENST00000419169 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
SMG7-204ENST00000419169 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
SMG7-204ENST00000419169 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
SMG7-204ENST00000419169 TBC1D32Q96NH3 1257 aa22.25■■□□□ 1.15
SMG7-204ENST00000419169 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
SMG7-204ENST00000419169 DZIP1LQ8IYY4 767 aaKnown RBP22.24■■□□□ 1.15
SMG7-204ENST00000419169 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
SMG7-204ENST00000419169 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
SMG7-204ENST00000419169 RIMBP3CA6NJZ7 1639 aa22.23■■□□□ 1.15
SMG7-204ENST00000419169 RIMBP3BA6NNM3 1639 aa22.23■■□□□ 1.15
SMG7-204ENST00000419169 RIMBP3Q9UFD9 1639 aa22.23■■□□□ 1.15
SMG7-204ENST00000419169 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
SMG7-204ENST00000419169 COL3A1P02461 1466 aaPredicted RBP22.21■■□□□ 1.15
SMG7-204ENST00000419169 TMPOP42166 694 aaKnown RBP22.21■■□□□ 1.15
SMG7-204ENST00000419169 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
SMG7-204ENST00000419169 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
SMG7-204ENST00000419169 IDI1Q13907 227 aa22.2■■□□□ 1.14
SMG7-204ENST00000419169 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
SMG7-204ENST00000419169 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
SMG7-204ENST00000419169 ANTXR1Q9H6X2 564 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms