RNA–Protein interactions for RNA: ENST00000418333.6

TGFA-203, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-203ENST00000418333 COL16A1Q07092 1604 aaPredicted RBP16.42■□□□□ 0.22
TGFA-203ENST00000418333 PTCH1Q13635 1447 aa16.42■□□□□ 0.22
TGFA-203ENST00000418333 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
TGFA-203ENST00000418333 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
TGFA-203ENST00000418333 NBPF1Q3BBV0 1214 aa16.41■□□□□ 0.22
TGFA-203ENST00000418333 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
TGFA-203ENST00000418333 AHDC1Q5TGY3 1603 aaPredicted RBP16.41■□□□□ 0.22
TGFA-203ENST00000418333 SOCS7O14512 581 aa16.4■□□□□ 0.22
TGFA-203ENST00000418333 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
TGFA-203ENST00000418333 TRAK1Q9UPV9 953 aa16.39■□□□□ 0.21
TGFA-203ENST00000418333 TECPR2O15040 1411 aa16.38■□□□□ 0.21
TGFA-203ENST00000418333 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
TGFA-203ENST00000418333 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
TGFA-203ENST00000418333 JCADQ9P266 1359 aa16.38■□□□□ 0.21
TGFA-203ENST00000418333 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
TGFA-203ENST00000418333 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
TGFA-203ENST00000418333 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
TGFA-203ENST00000418333 SHPRHQ149N8 1683 aa16.37■□□□□ 0.21
TGFA-203ENST00000418333 QRICH2Q9H0J4 1663 aa16.37■□□□□ 0.21
TGFA-203ENST00000418333 MST1RQ04912 1400 aa16.36■□□□□ 0.21
TGFA-203ENST00000418333 DLC1Q96QB1 1528 aa16.36■□□□□ 0.21
TGFA-203ENST00000418333 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
TGFA-203ENST00000418333 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
TGFA-203ENST00000418333 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
TGFA-203ENST00000418333 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
TGFA-203ENST00000418333 POGKQ9P215 609 aa16.32■□□□□ 0.2
TGFA-203ENST00000418333 FMN2Q9NZ56 1722 aa16.31■□□□□ 0.2
TGFA-203ENST00000418333 MINK1Q8N4C8 1332 aaPredicted RBP16.3■□□□□ 0.2
TGFA-203ENST00000418333 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
TGFA-203ENST00000418333 RGPD8O14715 1765 aaPredicted RBP16.3■□□□□ 0.2
TGFA-203ENST00000418333 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
TGFA-203ENST00000418333 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
TGFA-203ENST00000418333 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
TGFA-203ENST00000418333 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
TGFA-203ENST00000418333 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
TGFA-203ENST00000418333 MEX3CQ5U5Q3 659 aaKnown RBP16.28■□□□□ 0.2
TGFA-203ENST00000418333 LRP6O75581 1613 aa16.27■□□□□ 0.19
TGFA-203ENST00000418333 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
TGFA-203ENST00000418333 USP32Q8NFA0 1604 aa16.26■□□□□ 0.19
TGFA-203ENST00000418333 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
TGFA-203ENST00000418333 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
TGFA-203ENST00000418333 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
TGFA-203ENST00000418333 EIF3AQ14152 1382 aaKnown RBP16.23■□□□□ 0.19
TGFA-203ENST00000418333 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
TGFA-203ENST00000418333 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
TGFA-203ENST00000418333 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
TGFA-203ENST00000418333 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
TGFA-203ENST00000418333 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
TGFA-203ENST00000418333 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.19
TGFA-203ENST00000418333 KIF1AQ12756 1690 aa16.21■□□□□ 0.18
TGFA-203ENST00000418333 ITSN1Q15811 1721 aa16.2■□□□□ 0.18
TGFA-203ENST00000418333 USP47Q96K76 1375 aa16.2■□□□□ 0.18
TGFA-203ENST00000418333 TOPAZ1Q8N9V7 1692 aa16.19■□□□□ 0.18
TGFA-203ENST00000418333 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
TGFA-203ENST00000418333 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
TGFA-203ENST00000418333 POTEAQ6S8J7 498 aa16.18■□□□□ 0.18
TGFA-203ENST00000418333 ATP7BP35670 1465 aa16.17■□□□□ 0.18
TGFA-203ENST00000418333 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
TGFA-203ENST00000418333 NPHP3Q7Z494 1330 aa16.17■□□□□ 0.18
TGFA-203ENST00000418333 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
TGFA-203ENST00000418333 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
TGFA-203ENST00000418333 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
TGFA-203ENST00000418333 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
TGFA-203ENST00000418333 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
TGFA-203ENST00000418333 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
TGFA-203ENST00000418333 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
TGFA-203ENST00000418333 SRPK2P78362 688 aaKnown RBP16.14■□□□□ 0.17
TGFA-203ENST00000418333 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
TGFA-203ENST00000418333 PXDNQ92626 1479 aa16.14■□□□□ 0.17
TGFA-203ENST00000418333 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
TGFA-203ENST00000418333 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
TGFA-203ENST00000418333 PMFBP1Q8TBY8 1022 aa16.12■□□□□ 0.17
TGFA-203ENST00000418333 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
TGFA-203ENST00000418333 AFF2P51816 1311 aa16.11■□□□□ 0.17
TGFA-203ENST00000418333 MARF1Q9Y4F3 1742 aaKnown RBP16.11■□□□□ 0.17
TGFA-203ENST00000418333 FOXO3O43524 673 aa16.1■□□□□ 0.17
TGFA-203ENST00000418333 NUDT16Q96DE0 195 aaKnown RBP16.1■□□□□ 0.17
TGFA-203ENST00000418333 EVC2Q86UK5 1308 aa16.1■□□□□ 0.17
TGFA-203ENST00000418333 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
TGFA-203ENST00000418333 PHF8Q9UPP1 1060 aa16.09■□□□□ 0.17
TGFA-203ENST00000418333 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
TGFA-203ENST00000418333 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
TGFA-203ENST00000418333 SBNO2Q9Y2G9 1366 aa16.08■□□□□ 0.16
TGFA-203ENST00000418333 TESK2Q96S53 571 aa16.07■□□□□ 0.16
TGFA-203ENST00000418333 TRPM3Q9HCF6 1732 aaPredicted RBP16.06■□□□□ 0.16
TGFA-203ENST00000418333 NGLY1Q96IV0 654 aa16.06■□□□□ 0.16
TGFA-203ENST00000418333 AKAP12Q02952 1782 aa16.05■□□□□ 0.16
TGFA-203ENST00000418333 MYOM1P52179 1685 aa16.05■□□□□ 0.16
TGFA-203ENST00000418333 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
TGFA-203ENST00000418333 RXRBP28702 533 aa16.05■□□□□ 0.16
TGFA-203ENST00000418333 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.16
TGFA-203ENST00000418333 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
TGFA-203ENST00000418333 NGDNQ8NEJ9 315 aaKnown RBP16.04■□□□□ 0.16
TGFA-203ENST00000418333 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
TGFA-203ENST00000418333 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
TGFA-203ENST00000418333 ABCA3Q99758 1704 aa16.02■□□□□ 0.16
TGFA-203ENST00000418333 KRT28Q7Z3Y7 464 aa16.02■□□□□ 0.16
TGFA-203ENST00000418333 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.15
TGFA-203ENST00000418333 ATAD2Q6PL18 1390 aa16.01■□□□□ 0.15
TGFA-203ENST00000418333 ACEP12821 1306 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms