RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TET3O43151 1660 aa15.3■□□□□ 0.04
LIMK1-202ENST00000418310 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
LIMK1-202ENST00000418310 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
LIMK1-202ENST00000418310 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
LIMK1-202ENST00000418310 BRPF3Q9ULD4 1205 aa15.29■□□□□ 0.04
LIMK1-202ENST00000418310 UHRF1BP1LA0JNW5 1464 aa15.29■□□□□ 0.04
LIMK1-202ENST00000418310 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
LIMK1-202ENST00000418310 FBLN1P23142 703 aa15.28■□□□□ 0.04
LIMK1-202ENST00000418310 NPC1L1Q9UHC9 1359 aa15.28■□□□□ 0.04
LIMK1-202ENST00000418310 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
LIMK1-202ENST00000418310 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
LIMK1-202ENST00000418310 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.03
LIMK1-202ENST00000418310 CLASP1Q7Z460 1538 aa15.26■□□□□ 0.03
LIMK1-202ENST00000418310 NPATQ14207 1427 aa15.26■□□□□ 0.03
LIMK1-202ENST00000418310 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
LIMK1-202ENST00000418310 MROH2AA6NES4 1674 aa15.26■□□□□ 0.03
LIMK1-202ENST00000418310 PDE3AQ14432 1141 aa15.25■□□□□ 0.03
LIMK1-202ENST00000418310 POLR3AO14802 1390 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-202ENST00000418310 PDZRN3Q9UPQ7 1066 aa15.25■□□□□ 0.03
LIMK1-202ENST00000418310 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
LIMK1-202ENST00000418310 GSE1Q14687 1217 aa15.24■□□□□ 0.03
LIMK1-202ENST00000418310 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
LIMK1-202ENST00000418310 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
LIMK1-202ENST00000418310 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
LIMK1-202ENST00000418310 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
LIMK1-202ENST00000418310 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
LIMK1-202ENST00000418310 EXOSC9Q06265 439 aaKnown RBP15.23■□□□□ 0.03
LIMK1-202ENST00000418310 POGKQ9P215 609 aa15.23■□□□□ 0.03
LIMK1-202ENST00000418310 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 KIF1BO60333 1816 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 MYOM2P54296 1465 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 IDI1Q13907 227 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 ITPRIPQ8IWB1 547 aa15.22■□□□□ 0.03
LIMK1-202ENST00000418310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
LIMK1-202ENST00000418310 CD109Q6YHK3 1445 aa15.21■□□□□ 0.03
LIMK1-202ENST00000418310 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.02
LIMK1-202ENST00000418310 USP19O94966 1318 aa15.2■□□□□ 0.02
LIMK1-202ENST00000418310 MAPK8IP3Q9UPT6 1336 aa15.2■□□□□ 0.02
LIMK1-202ENST00000418310 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
LIMK1-202ENST00000418310 VWDEQ8N2E2 1590 aa15.2■□□□□ 0.02
LIMK1-202ENST00000418310 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
LIMK1-202ENST00000418310 MYH16Q9H6N6 1097 aa15.19■□□□□ 0.02
LIMK1-202ENST00000418310 ABCA9Q8IUA7 1624 aa15.19■□□□□ 0.02
LIMK1-202ENST00000418310 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
LIMK1-202ENST00000418310 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
LIMK1-202ENST00000418310 KIDINS220Q9ULH0 1771 aa15.18■□□□□ 0.02
LIMK1-202ENST00000418310 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
LIMK1-202ENST00000418310 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
LIMK1-202ENST00000418310 FBXO31Q5XUX0 539 aaPredicted RBP15.18■□□□□ 0.02
LIMK1-202ENST00000418310 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
LIMK1-202ENST00000418310 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
LIMK1-202ENST00000418310 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
LIMK1-202ENST00000418310 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
LIMK1-202ENST00000418310 MLECQ14165 292 aa15.17■□□□□ 0.02
LIMK1-202ENST00000418310 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
LIMK1-202ENST00000418310 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
LIMK1-202ENST00000418310 RIPK4P57078 832 aa15.16■□□□□ 0.02
LIMK1-202ENST00000418310 SSH1Q8WYL5 1049 aa15.16■□□□□ 0.02
LIMK1-202ENST00000418310 A0A1W2PP64 1363 aa15.16■□□□□ 0.02
LIMK1-202ENST00000418310 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
LIMK1-202ENST00000418310 HMOX1P09601 288 aa15.16■□□□□ 0.02
LIMK1-202ENST00000418310 ANO8Q9HCE9 1232 aaPredicted RBP15.16■□□□□ 0.02
LIMK1-202ENST00000418310 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
LIMK1-202ENST00000418310 MVPQ14764 893 aaKnown RBP15.15■□□□□ 0.02
LIMK1-202ENST00000418310 ARAP3Q8WWN8 1544 aa15.15■□□□□ 0.02
LIMK1-202ENST00000418310 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
LIMK1-202ENST00000418310 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
LIMK1-202ENST00000418310 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
LIMK1-202ENST00000418310 TRIM27P14373 513 aa15.15■□□□□ 0.02
LIMK1-202ENST00000418310 BECN1Q14457 450 aa15.14■□□□□ 0.01
LIMK1-202ENST00000418310 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
LIMK1-202ENST00000418310 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
LIMK1-202ENST00000418310 ADGRB3O60242 1522 aa15.14■□□□□ 0.01
LIMK1-202ENST00000418310 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
LIMK1-202ENST00000418310 FYB1O15117 783 aa15.13■□□□□ 0.01
LIMK1-202ENST00000418310 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
LIMK1-202ENST00000418310 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
LIMK1-202ENST00000418310 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
LIMK1-202ENST00000418310 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
LIMK1-202ENST00000418310 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
LIMK1-202ENST00000418310 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-202ENST00000418310 GZF1Q9H116 711 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-202ENST00000418310 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 SHPRHQ149N8 1683 aa15.11■□□□□ 0.01
LIMK1-202ENST00000418310 TULP4Q9NRJ4 1543 aa15.1■□□□□ 0.01
LIMK1-202ENST00000418310 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
LIMK1-202ENST00000418310 TBC1D2Q9BYX2 928 aa15.1■□□□□ 0.01
LIMK1-202ENST00000418310 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
LIMK1-202ENST00000418310 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
LIMK1-202ENST00000418310 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
LIMK1-202ENST00000418310 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
LIMK1-202ENST00000418310 PRKAR2BP31323 418 aa15.09■□□□□ 0.01
LIMK1-202ENST00000418310 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
LIMK1-202ENST00000418310 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0.01
LIMK1-202ENST00000418310 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms