RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
HLA-DMB-258ENST00000418107 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
HLA-DMB-258ENST00000418107 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
HLA-DMB-258ENST00000418107 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
HLA-DMB-258ENST00000418107 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
HLA-DMB-258ENST00000418107 KIF1BO60333 1816 aa18.9■□□□□ 0.62
HLA-DMB-258ENST00000418107 LAMC1P11047 1609 aa18.87■□□□□ 0.61
HLA-DMB-258ENST00000418107 SOS2Q07890 1332 aaPredicted RBP18.87■□□□□ 0.61
HLA-DMB-258ENST00000418107 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
HLA-DMB-258ENST00000418107 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
HLA-DMB-258ENST00000418107 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
HLA-DMB-258ENST00000418107 USP21Q9UK80 565 aa18.83■□□□□ 0.61
HLA-DMB-258ENST00000418107 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
HLA-DMB-258ENST00000418107 SRCAPQ6ZRS2 3230 aa18.82■□□□□ 0.6
HLA-DMB-258ENST00000418107 TRPC5Q9UL62 973 aaPredicted RBP18.81■□□□□ 0.6
HLA-DMB-258ENST00000418107 ATAD2Q6PL18 1390 aa18.8■□□□□ 0.6
HLA-DMB-258ENST00000418107 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
HLA-DMB-258ENST00000418107 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
HLA-DMB-258ENST00000418107 PPLO60437 1756 aa18.78■□□□□ 0.6
HLA-DMB-258ENST00000418107 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
HLA-DMB-258ENST00000418107 ATRNO75882 1429 aa18.78■□□□□ 0.6
HLA-DMB-258ENST00000418107 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.59
HLA-DMB-258ENST00000418107 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
HLA-DMB-258ENST00000418107 MYOM2P54296 1465 aa18.76■□□□□ 0.59
HLA-DMB-258ENST00000418107 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
HLA-DMB-258ENST00000418107 PXDNQ92626 1479 aa18.76■□□□□ 0.59
HLA-DMB-258ENST00000418107 FOXO3O43524 673 aa18.74■□□□□ 0.59
HLA-DMB-258ENST00000418107 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
HLA-DMB-258ENST00000418107 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
HLA-DMB-258ENST00000418107 ZNF316A6NFI3 1004 aaPredicted RBP18.73■□□□□ 0.59
HLA-DMB-258ENST00000418107 STK26Q9P289 416 aa18.73■□□□□ 0.59
HLA-DMB-258ENST00000418107 EP400Q96L91 3159 aa18.73■□□□□ 0.59
HLA-DMB-258ENST00000418107 BCL9LQ86UU0 1499 aa18.72■□□□□ 0.59
HLA-DMB-258ENST00000418107 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
HLA-DMB-258ENST00000418107 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
HLA-DMB-258ENST00000418107 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
HLA-DMB-258ENST00000418107 CCDC144AA2RUR9 1427 aa18.69■□□□□ 0.58
HLA-DMB-258ENST00000418107 TECPR2O15040 1411 aa18.69■□□□□ 0.58
HLA-DMB-258ENST00000418107 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
HLA-DMB-258ENST00000418107 PLEKHH1Q9ULM0 1364 aa18.68■□□□□ 0.58
HLA-DMB-258ENST00000418107 MARF1Q9Y4F3 1742 aaKnown RBP18.68■□□□□ 0.58
HLA-DMB-258ENST00000418107 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
HLA-DMB-258ENST00000418107 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
HLA-DMB-258ENST00000418107 SPATA31E1Q6ZUB1 1445 aa18.67■□□□□ 0.58
HLA-DMB-258ENST00000418107 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
HLA-DMB-258ENST00000418107 ABCC11Q96J66 1382 aa18.66■□□□□ 0.58
HLA-DMB-258ENST00000418107 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
HLA-DMB-258ENST00000418107 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
HLA-DMB-258ENST00000418107 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
HLA-DMB-258ENST00000418107 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
HLA-DMB-258ENST00000418107 CCDC125Q86Z20 511 aa18.63■□□□□ 0.57
HLA-DMB-258ENST00000418107 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
HLA-DMB-258ENST00000418107 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
HLA-DMB-258ENST00000418107 SLIT2O94813 1529 aa18.62■□□□□ 0.57
HLA-DMB-258ENST00000418107 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
HLA-DMB-258ENST00000418107 YTHDC2Q9H6S0 1430 aaKnown RBP18.62■□□□□ 0.57
HLA-DMB-258ENST00000418107 GLI3P10071 1580 aa18.62■□□□□ 0.57
HLA-DMB-258ENST00000418107 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
HLA-DMB-258ENST00000418107 KRT28Q7Z3Y7 464 aa18.61■□□□□ 0.57
HLA-DMB-258ENST00000418107 KIF1AQ12756 1690 aa18.61■□□□□ 0.57
HLA-DMB-258ENST00000418107 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
HLA-DMB-258ENST00000418107 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
HLA-DMB-258ENST00000418107 PLEKHG5O94827 1062 aa18.57■□□□□ 0.56
HLA-DMB-258ENST00000418107 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
HLA-DMB-258ENST00000418107 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
HLA-DMB-258ENST00000418107 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
HLA-DMB-258ENST00000418107 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
HLA-DMB-258ENST00000418107 CABLES1Q8TDN4 633 aa18.56■□□□□ 0.56
HLA-DMB-258ENST00000418107 PHF8Q9UPP1 1060 aa18.56■□□□□ 0.56
HLA-DMB-258ENST00000418107 SIRT1Q96EB6 747 aa18.55■□□□□ 0.56
HLA-DMB-258ENST00000418107 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
HLA-DMB-258ENST00000418107 RGPD8O14715 1765 aaPredicted RBP18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 PSME1Q06323 249 aa18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 NBPF8Q3BBV2 869 aa18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
HLA-DMB-258ENST00000418107 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
HLA-DMB-258ENST00000418107 VPS72Q15906 364 aa18.53■□□□□ 0.56
HLA-DMB-258ENST00000418107 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
HLA-DMB-258ENST00000418107 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
HLA-DMB-258ENST00000418107 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.55
HLA-DMB-258ENST00000418107 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.55
HLA-DMB-258ENST00000418107 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
HLA-DMB-258ENST00000418107 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
HLA-DMB-258ENST00000418107 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
HLA-DMB-258ENST00000418107 PLCH1Q4KWH8 1693 aa18.51■□□□□ 0.55
HLA-DMB-258ENST00000418107 ARHGEF10O15013 1369 aa18.5■□□□□ 0.55
HLA-DMB-258ENST00000418107 ABCA3Q99758 1704 aa18.49■□□□□ 0.55
HLA-DMB-258ENST00000418107 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
HLA-DMB-258ENST00000418107 NWD2Q9ULI1 1742 aa18.48■□□□□ 0.55
HLA-DMB-258ENST00000418107 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
HLA-DMB-258ENST00000418107 PMFBP1Q8TBY8 1022 aa18.48■□□□□ 0.55
HLA-DMB-258ENST00000418107 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
HLA-DMB-258ENST00000418107 ONECUT3O60422 494 aaPredicted RBP18.47■□□□□ 0.55
HLA-DMB-258ENST00000418107 KRT27Q7Z3Y8 459 aa18.47■□□□□ 0.55
HLA-DMB-258ENST00000418107 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
HLA-DMB-258ENST00000418107 POGKQ9P215 609 aa18.46■□□□□ 0.55
HLA-DMB-258ENST00000418107 A0A0G2JS52 829 aa18.45■□□□□ 0.54
HLA-DMB-258ENST00000418107 MYT1Q01538 1121 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms