RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 BICD2Q8TD16 824 aa22.7■■□□□ 1.22
NECAB1-201ENST00000417640 NOC3LQ8WTT2 800 aaKnown RBP22.7■■□□□ 1.22
NECAB1-201ENST00000417640 LRRFIP1Q32MZ4 808 aaKnown RBP22.7■■□□□ 1.22
NECAB1-201ENST00000417640 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
NECAB1-201ENST00000417640 ZNF592Q92610 1267 aa22.69■■□□□ 1.22
NECAB1-201ENST00000417640 CPLX2Q6PUV4 134 aaKnown RBP22.68■■□□□ 1.22
NECAB1-201ENST00000417640 NAIPQ13075 1403 aa22.67■■□□□ 1.22
NECAB1-201ENST00000417640 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
NECAB1-201ENST00000417640 ERC2O15083 957 aa22.66■■□□□ 1.22
NECAB1-201ENST00000417640 G3BP1Q13283 466 aaKnown RBP eCLIP22.66■■□□□ 1.22
NECAB1-201ENST00000417640 GCC1Q96CN9 775 aa22.66■■□□□ 1.22
NECAB1-201ENST00000417640 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
NECAB1-201ENST00000417640 CCDC39Q9UFE4 941 aa22.66■■□□□ 1.22
NECAB1-201ENST00000417640 RABEP1Q15276 862 aa22.65■■□□□ 1.22
NECAB1-201ENST00000417640 DDX58O95786 925 aaKnown RBP22.65■■□□□ 1.22
NECAB1-201ENST00000417640 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
NECAB1-201ENST00000417640 MBD3O95983 291 aa22.64■■□□□ 1.22
NECAB1-201ENST00000417640 TPD52L1Q16890 204 aaPredicted RBP22.64■■□□□ 1.21
NECAB1-201ENST00000417640 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
NECAB1-201ENST00000417640 CAVIN1Q6NZI2 390 aaKnown RBP22.63■■□□□ 1.21
NECAB1-201ENST00000417640 SASS6Q6UVJ0 657 aa22.63■■□□□ 1.21
NECAB1-201ENST00000417640 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
NECAB1-201ENST00000417640 EVA1CP58658 441 aa22.63■■□□□ 1.21
NECAB1-201ENST00000417640 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
NECAB1-201ENST00000417640 DAPK1P53355 1430 aa22.63■■□□□ 1.21
NECAB1-201ENST00000417640 CCAR2Q8N163 923 aaKnown RBP22.62■■□□□ 1.21
NECAB1-201ENST00000417640 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
NECAB1-201ENST00000417640 R3HCC1Q9Y3T6 440 aaKnown RBP22.62■■□□□ 1.21
NECAB1-201ENST00000417640 MSH5O43196 834 aa22.62■■□□□ 1.21
NECAB1-201ENST00000417640 TPM1P09493 284 aa22.62■■□□□ 1.21
NECAB1-201ENST00000417640 SYNE3Q6ZMZ3 975 aa22.62■■□□□ 1.21
NECAB1-201ENST00000417640 CPLX1O14810 134 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 PRKAR2BP31323 418 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 TSR1Q2NL82 804 aaKnown RBP22.61■■□□□ 1.21
NECAB1-201ENST00000417640 RNF214Q8ND24 703 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 NOB1Q9ULX3 412 aaKnown RBP22.61■■□□□ 1.21
NECAB1-201ENST00000417640 MCM2P49736 904 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
NECAB1-201ENST00000417640 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 TSR2Q969E8 191 aaKnown RBP22.61■■□□□ 1.21
NECAB1-201ENST00000417640 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
NECAB1-201ENST00000417640 TTC5Q8N0Z6 440 aa22.6■■□□□ 1.21
NECAB1-201ENST00000417640 UBTFL1P0CB47 393 aaPredicted RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 TROQ12816 1431 aaPredicted RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 PES1O00541 588 aaKnown RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 ZNF771Q7L3S4 317 aaPredicted RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.6■■□□□ 1.21
NECAB1-201ENST00000417640 GNAI3P08754 354 aa22.59■■□□□ 1.21
NECAB1-201ENST00000417640 NEK4P51957 841 aa22.59■■□□□ 1.21
NECAB1-201ENST00000417640 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
NECAB1-201ENST00000417640 TRIM29Q14134 588 aa22.59■■□□□ 1.21
NECAB1-201ENST00000417640 MVPQ14764 893 aaKnown RBP22.59■■□□□ 1.21
NECAB1-201ENST00000417640 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
NECAB1-201ENST00000417640 CCDC173Q0VFZ6 552 aa22.58■■□□□ 1.21
NECAB1-201ENST00000417640 GPS2Q13227 327 aa22.58■■□□□ 1.21
NECAB1-201ENST00000417640 A0A0U1RQG5 324 aaPredicted RBP22.58■■□□□ 1.21
NECAB1-201ENST00000417640 TWISTNBQ3B726 338 aaPredicted RBP22.58■■□□□ 1.21
NECAB1-201ENST00000417640 MAP7D2Q96T17 732 aa22.58■■□□□ 1.21
NECAB1-201ENST00000417640 CCDC73Q6ZRK6 1079 aa22.58■■□□□ 1.2
NECAB1-201ENST00000417640 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
NECAB1-201ENST00000417640 PRPF40AO75400 957 aaKnown RBP22.57■■□□□ 1.2
NECAB1-201ENST00000417640 ATF7IPQ6VMQ6 1270 aa22.57■■□□□ 1.2
NECAB1-201ENST00000417640 MTERF4Q7Z6M4 381 aaKnown RBP22.57■■□□□ 1.2
NECAB1-201ENST00000417640 HOMER1Q86YM7 354 aa22.57■■□□□ 1.2
NECAB1-201ENST00000417640 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
NECAB1-201ENST00000417640 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
NECAB1-201ENST00000417640 TPM2P07951 284 aa22.56■■□□□ 1.2
NECAB1-201ENST00000417640 CYB5RLQ6IPT4 315 aa22.56■■□□□ 1.2
NECAB1-201ENST00000417640 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
NECAB1-201ENST00000417640 SLFN5Q08AF3 891 aa22.56■■□□□ 1.2
NECAB1-201ENST00000417640 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
NECAB1-201ENST00000417640 C11orf95C9JLR9 678 aaPredicted RBP22.55■■□□□ 1.2
NECAB1-201ENST00000417640 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
NECAB1-201ENST00000417640 LETM1O95202 739 aaPredicted RBP22.55■■□□□ 1.2
NECAB1-201ENST00000417640 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
NECAB1-201ENST00000417640 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
NECAB1-201ENST00000417640 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
NECAB1-201ENST00000417640 TRDNQ13061 729 aa22.53■■□□□ 1.2
NECAB1-201ENST00000417640 K7ELQ4 463 aaPredicted RBP22.53■■□□□ 1.2
NECAB1-201ENST00000417640 MARCH6O60337 910 aa22.53■■□□□ 1.2
NECAB1-201ENST00000417640 HOOK1Q9UJC3 728 aaKnown RBP22.53■■□□□ 1.2
NECAB1-201ENST00000417640 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
NECAB1-201ENST00000417640 PSMA5P28066 241 aa22.52■■□□□ 1.2
NECAB1-201ENST00000417640 MCM4P33991 863 aa22.52■■□□□ 1.2
NECAB1-201ENST00000417640 TSPY26PQ9H489 355 aa22.52■■□□□ 1.2
NECAB1-201ENST00000417640 GRPEL1Q9HAV7 217 aa22.51■■□□□ 1.19
NECAB1-201ENST00000417640 CIZ1Q9ULV3 898 aaPredicted RBP22.51■■□□□ 1.19
NECAB1-201ENST00000417640 SURF6O75683 361 aaKnown RBP22.51■■□□□ 1.19
NECAB1-201ENST00000417640 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
NECAB1-201ENST00000417640 CLASRPQ8N2M8 674 aaKnown RBP22.51■■□□□ 1.19
NECAB1-201ENST00000417640 ANKRD30BQ9BXX2 1392 aa22.51■■□□□ 1.19
NECAB1-201ENST00000417640 APPP05067 770 aa22.5■■□□□ 1.19
NECAB1-201ENST00000417640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.5■■□□□ 1.19
NECAB1-201ENST00000417640 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
NECAB1-201ENST00000417640 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
NECAB1-201ENST00000417640 CCDC70Q6NSX1 233 aa22.49■■□□□ 1.19
NECAB1-201ENST00000417640 ANKRD20A12PQ8NF67 263 aa22.49■■□□□ 1.19
NECAB1-201ENST00000417640 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
NECAB1-201ENST00000417640 TEX35Q5T0J7 233 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms