RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.2■□□□□ 0.18
SYNC-203ENST00000417633 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
SYNC-203ENST00000417633 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
SYNC-203ENST00000417633 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
SYNC-203ENST00000417633 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
SYNC-203ENST00000417633 TMF1P82094 1093 aa16.18■□□□□ 0.18
SYNC-203ENST00000417633 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
SYNC-203ENST00000417633 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
SYNC-203ENST00000417633 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
SYNC-203ENST00000417633 ADGRB2O60241 1585 aa16.17■□□□□ 0.18
SYNC-203ENST00000417633 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
SYNC-203ENST00000417633 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
SYNC-203ENST00000417633 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
SYNC-203ENST00000417633 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
SYNC-203ENST00000417633 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
SYNC-203ENST00000417633 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
SYNC-203ENST00000417633 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
SYNC-203ENST00000417633 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.18
SYNC-203ENST00000417633 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
SYNC-203ENST00000417633 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
SYNC-203ENST00000417633 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
SYNC-203ENST00000417633 DCCP43146 1447 aa16.12■□□□□ 0.17
SYNC-203ENST00000417633 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
SYNC-203ENST00000417633 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
SYNC-203ENST00000417633 KIF7Q2M1P5 1343 aa16.11■□□□□ 0.17
SYNC-203ENST00000417633 MSH6P52701 1360 aa16.11■□□□□ 0.17
SYNC-203ENST00000417633 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
SYNC-203ENST00000417633 CABP2Q9NPB3 220 aa16.1■□□□□ 0.17
SYNC-203ENST00000417633 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
SYNC-203ENST00000417633 CCDC7Q96M83 1385 aa16.1■□□□□ 0.17
SYNC-203ENST00000417633 ATF3P18847 181 aa16.08■□□□□ 0.16
SYNC-203ENST00000417633 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
SYNC-203ENST00000417633 NUDT16Q96DE0 195 aaKnown RBP16.08■□□□□ 0.16
SYNC-203ENST00000417633 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
SYNC-203ENST00000417633 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
SYNC-203ENST00000417633 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
SYNC-203ENST00000417633 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
SYNC-203ENST00000417633 PRR36Q9H6K5 1346 aa16.06■□□□□ 0.16
SYNC-203ENST00000417633 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
SYNC-203ENST00000417633 ATP7BP35670 1465 aa16.05■□□□□ 0.16
SYNC-203ENST00000417633 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
SYNC-203ENST00000417633 USP32Q8NFA0 1604 aa16.04■□□□□ 0.16
SYNC-203ENST00000417633 MST1RQ04912 1400 aa16.03■□□□□ 0.16
SYNC-203ENST00000417633 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
SYNC-203ENST00000417633 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
SYNC-203ENST00000417633 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
SYNC-203ENST00000417633 NUTM2FA1L443 756 aa16.02■□□□□ 0.16
SYNC-203ENST00000417633 POLR3GLQ9BT43 218 aa16.02■□□□□ 0.16
SYNC-203ENST00000417633 RGPD8O14715 1765 aaPredicted RBP16.02■□□□□ 0.15
SYNC-203ENST00000417633 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
SYNC-203ENST00000417633 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
SYNC-203ENST00000417633 SLAIN2Q9P270 581 aa16.01■□□□□ 0.15
SYNC-203ENST00000417633 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
SYNC-203ENST00000417633 TMC1Q8TDI8 760 aa16■□□□□ 0.15
SYNC-203ENST00000417633 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
SYNC-203ENST00000417633 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
SYNC-203ENST00000417633 MYOM1P52179 1685 aa15.99■□□□□ 0.15
SYNC-203ENST00000417633 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
SYNC-203ENST00000417633 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
SYNC-203ENST00000417633 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
SYNC-203ENST00000417633 CPSF1Q10570 1443 aaKnown RBP15.97■□□□□ 0.15
SYNC-203ENST00000417633 TOM1O60784 492 aa15.97■□□□□ 0.15
SYNC-203ENST00000417633 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
SYNC-203ENST00000417633 TERF2IPQ9NYB0 399 aa15.97■□□□□ 0.15
SYNC-203ENST00000417633 POLR3AO14802 1390 aaPredicted RBP15.97■□□□□ 0.15
SYNC-203ENST00000417633 ANKRD36BQ8N2N9 1353 aa15.97■□□□□ 0.15
SYNC-203ENST00000417633 CD163L1Q9NR16 1453 aa15.97■□□□□ 0.15
SYNC-203ENST00000417633 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
SYNC-203ENST00000417633 PANK3Q9H999 370 aa15.96■□□□□ 0.15
SYNC-203ENST00000417633 ACEP12821 1306 aa15.95■□□□□ 0.14
SYNC-203ENST00000417633 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
SYNC-203ENST00000417633 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
SYNC-203ENST00000417633 BRINP3Q76B58 766 aa15.94■□□□□ 0.14
SYNC-203ENST00000417633 NGDNQ8NEJ9 315 aaKnown RBP15.94■□□□□ 0.14
SYNC-203ENST00000417633 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
SYNC-203ENST00000417633 A0A1W2PP64 1363 aa15.93■□□□□ 0.14
SYNC-203ENST00000417633 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
SYNC-203ENST00000417633 CARD14Q9BXL6 1004 aa15.92■□□□□ 0.14
SYNC-203ENST00000417633 AKAP12Q02952 1782 aa15.92■□□□□ 0.14
SYNC-203ENST00000417633 BRD4O60885 1362 aaPredicted RBP15.91■□□□□ 0.14
SYNC-203ENST00000417633 UBAP1LF5GYI3 381 aa15.91■□□□□ 0.14
SYNC-203ENST00000417633 KTN1Q86UP2 1357 aaKnown RBP15.9■□□□□ 0.14
SYNC-203ENST00000417633 FOXO3O43524 673 aa15.9■□□□□ 0.14
SYNC-203ENST00000417633 USP6P35125 1406 aa15.9■□□□□ 0.14
SYNC-203ENST00000417633 SSH2Q76I76 1423 aa15.9■□□□□ 0.14
SYNC-203ENST00000417633 NPHP3Q7Z494 1330 aa15.9■□□□□ 0.14
SYNC-203ENST00000417633 MON2Q7Z3U7 1717 aa15.89■□□□□ 0.13
SYNC-203ENST00000417633 PSME1Q06323 249 aa15.89■□□□□ 0.13
SYNC-203ENST00000417633 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
SYNC-203ENST00000417633 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
SYNC-203ENST00000417633 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
SYNC-203ENST00000417633 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
SYNC-203ENST00000417633 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
SYNC-203ENST00000417633 NSD3Q9BZ95 1437 aa15.86■□□□□ 0.13
SYNC-203ENST00000417633 SOS2Q07890 1332 aaPredicted RBP15.86■□□□□ 0.13
SYNC-203ENST00000417633 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
SYNC-203ENST00000417633 NPC1L1Q9UHC9 1359 aa15.86■□□□□ 0.13
SYNC-203ENST00000417633 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
SYNC-203ENST00000417633 DDX17Q92841 729 aaKnown RBP15.85■□□□□ 0.13
SYNC-203ENST00000417633 NHSL1Q5SYE7 1610 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms