RNA–Protein interactions for RNA: ENST00000417500.5

ARPC4-202, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 5

Gene ARPC4, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-202ENST00000417500 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
ARPC4-202ENST00000417500 LRP6O75581 1613 aa28.61■■■□□ 2.17
ARPC4-202ENST00000417500 DHX57Q6P158 1386 aaKnown RBP28.61■■■□□ 2.17
ARPC4-202ENST00000417500 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
ARPC4-202ENST00000417500 TECPR2O15040 1411 aa28.6■■■□□ 2.17
ARPC4-202ENST00000417500 CFAP70Q5T0N1 1121 aa28.59■■■□□ 2.17
ARPC4-202ENST00000417500 YTHDC2Q9H6S0 1430 aaKnown RBP28.59■■■□□ 2.17
ARPC4-202ENST00000417500 MYOM2P54296 1465 aa28.58■■■□□ 2.17
ARPC4-202ENST00000417500 SIRT1Q96EB6 747 aa28.55■■■□□ 2.16
ARPC4-202ENST00000417500 KDM2AQ9Y2K7 1162 aa28.55■■■□□ 2.16
ARPC4-202ENST00000417500 CDC42BPGQ6DT37 1551 aa28.54■■■□□ 2.16
ARPC4-202ENST00000417500 PNPLA6Q8IY17 1366 aa28.54■■■□□ 2.16
ARPC4-202ENST00000417500 NPHP3Q7Z494 1330 aa28.54■■■□□ 2.16
ARPC4-202ENST00000417500 NUTM2FA1L443 756 aa28.54■■■□□ 2.16
ARPC4-202ENST00000417500 SOS2Q07890 1332 aaPredicted RBP28.53■■■□□ 2.16
ARPC4-202ENST00000417500 NRXN1Q9ULB1 1477 aa28.53■■■□□ 2.16
ARPC4-202ENST00000417500 DCAF11Q8TEB1 546 aa28.52■■■□□ 2.16
ARPC4-202ENST00000417500 STAC3Q96MF2 364 aa28.52■■■□□ 2.16
ARPC4-202ENST00000417500 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.16
ARPC4-202ENST00000417500 LAMC1P11047 1609 aa28.51■■■□□ 2.15
ARPC4-202ENST00000417500 KNDC1Q76NI1 1749 aa28.51■■■□□ 2.15
ARPC4-202ENST00000417500 C8orf37Q96NL8 207 aa28.5■■■□□ 2.15
ARPC4-202ENST00000417500 POGKQ9P215 609 aa28.5■■■□□ 2.15
ARPC4-202ENST00000417500 FOXO3O43524 673 aa28.48■■■□□ 2.15
ARPC4-202ENST00000417500 AFF2P51816 1311 aa28.47■■■□□ 2.15
ARPC4-202ENST00000417500 SAFB2Q14151 953 aaKnown RBP eCLIP28.47■■■□□ 2.15
ARPC4-202ENST00000417500 PRAM1Q96QH2 718 aa28.47■■■□□ 2.15
ARPC4-202ENST00000417500 ADAMTS2O95450 1211 aa28.46■■■□□ 2.15
ARPC4-202ENST00000417500 RXRBP28702 533 aa28.46■■■□□ 2.15
ARPC4-202ENST00000417500 NGLY1Q96IV0 654 aa28.45■■■□□ 2.14
ARPC4-202ENST00000417500 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
ARPC4-202ENST00000417500 TRAK1Q9UPV9 953 aa28.42■■■□□ 2.14
ARPC4-202ENST00000417500 QTRT2Q9H974 415 aaKnown RBP28.38■■■□□ 2.13
ARPC4-202ENST00000417500 FMN2Q9NZ56 1722 aa28.36■■■□□ 2.13
ARPC4-202ENST00000417500 PHF8Q9UPP1 1060 aa28.36■■■□□ 2.13
ARPC4-202ENST00000417500 DLC1Q96QB1 1528 aa28.36■■■□□ 2.13
ARPC4-202ENST00000417500 PSME1Q06323 249 aa28.35■■■□□ 2.13
ARPC4-202ENST00000417500 PXDNQ92626 1479 aa28.34■■■□□ 2.13
ARPC4-202ENST00000417500 KRT28Q7Z3Y7 464 aa28.34■■■□□ 2.13
ARPC4-202ENST00000417500 RBM6P78332 1123 aaKnown RBP28.32■■■□□ 2.12
ARPC4-202ENST00000417500 USP21Q9UK80 565 aa28.32■■■□□ 2.12
ARPC4-202ENST00000417500 KIF1AQ12756 1690 aa28.32■■■□□ 2.12
ARPC4-202ENST00000417500 ADGRB1O14514 1584 aa28.31■■■□□ 2.12
ARPC4-202ENST00000417500 MINK1Q8N4C8 1332 aaPredicted RBP28.3■■■□□ 2.12
ARPC4-202ENST00000417500 HIRIP3Q9BW71 556 aaPredicted RBP28.3■■■□□ 2.12
ARPC4-202ENST00000417500 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
ARPC4-202ENST00000417500 HAP1P54257 671 aaPredicted RBP28.29■■■□□ 2.12
ARPC4-202ENST00000417500 SPATA31A3Q5VYP0 1347 aa28.28■■■□□ 2.12
ARPC4-202ENST00000417500 COL22A1Q8NFW1 1626 aaPredicted RBP28.28■■■□□ 2.12
ARPC4-202ENST00000417500 TRPC5Q9UL62 973 aaPredicted RBP28.27■■■□□ 2.12
ARPC4-202ENST00000417500 CDK12Q9NYV4 1490 aaPredicted RBP28.27■■■□□ 2.12
ARPC4-202ENST00000417500 ANKARQ7Z5J8 1434 aa28.26■■■□□ 2.12
ARPC4-202ENST00000417500 LMOD2Q6P5Q4 547 aa28.26■■■□□ 2.11
ARPC4-202ENST00000417500 FNBP4Q8N3X1 1017 aaPredicted RBP28.25■■■□□ 2.11
ARPC4-202ENST00000417500 PMFBP1Q8TBY8 1022 aa28.25■■■□□ 2.11
ARPC4-202ENST00000417500 WASLO00401 505 aaPredicted RBP28.23■■■□□ 2.11
ARPC4-202ENST00000417500 ADGRB2O60241 1585 aa28.2■■■□□ 2.11
ARPC4-202ENST00000417500 RGPD8O14715 1765 aaPredicted RBP28.2■■■□□ 2.11
ARPC4-202ENST00000417500 TNS3Q68CZ2 1445 aa28.19■■■□□ 2.1
ARPC4-202ENST00000417500 PLEKHG5O94827 1062 aa28.19■■■□□ 2.1
ARPC4-202ENST00000417500 SBNO1A3KN83 1393 aa28.19■■■□□ 2.1
ARPC4-202ENST00000417500 GPRASP1Q5JY77 1395 aa28.19■■■□□ 2.1
ARPC4-202ENST00000417500 ARHGEF10O15013 1369 aa28.18■■■□□ 2.1
ARPC4-202ENST00000417500 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.12e-6■■□□□ 14.5
ARPC4-202ENST00000417500 NGDNQ8NEJ9 315 aaKnown RBP28.16■■■□□ 2.1
ARPC4-202ENST00000417500 TULP4Q9NRJ4 1543 aa28.15■■■□□ 2.1
ARPC4-202ENST00000417500 RGS12O14924 1447 aa28.15■■■□□ 2.1
ARPC4-202ENST00000417500 ATRNO75882 1429 aa28.12■■■□□ 2.09
ARPC4-202ENST00000417500 CABLES1Q8TDN4 633 aa28.12■■■□□ 2.09
ARPC4-202ENST00000417500 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
ARPC4-202ENST00000417500 USP32Q8NFA0 1604 aa28.1■■■□□ 2.09
ARPC4-202ENST00000417500 PAK3O75914 559 aaPredicted RBP28.1■■■□□ 2.09
ARPC4-202ENST00000417500 NBPF1Q3BBV0 1214 aa28.1■■■□□ 2.09
ARPC4-202ENST00000417500 UNC5CLQ8IV45 518 aa28.1■■■□□ 2.09
ARPC4-202ENST00000417500 NUDT16Q96DE0 195 aaKnown RBP28.1■■■□□ 2.09
ARPC4-202ENST00000417500 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
ARPC4-202ENST00000417500 KIAA1210Q9ULL0 1709 aa28.09■■■□□ 2.09
ARPC4-202ENST00000417500 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
ARPC4-202ENST00000417500 NEUROD1Q13562 356 aa28.09■■■□□ 2.09
ARPC4-202ENST00000417500 CDK19Q9BWU1 502 aa28.09■■■□□ 2.09
ARPC4-202ENST00000417500 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
ARPC4-202ENST00000417500 GJD4Q96KN9 370 aaPredicted RBP28.08■■■□□ 2.09
ARPC4-202ENST00000417500 L3MBTL2Q969R5 705 aa28.07■■■□□ 2.08
ARPC4-202ENST00000417500 SIN3AQ96ST3 1273 aa28.06■■■□□ 2.08
ARPC4-202ENST00000417500 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
ARPC4-202ENST00000417500 CENPJQ9HC77 1338 aaPredicted RBP28.03■■■□□ 2.08
ARPC4-202ENST00000417500 CCDC9Q9Y3X0 531 aaKnown RBP28.03■■■□□ 2.08
ARPC4-202ENST00000417500 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
ARPC4-202ENST00000417500 SLIT2O94813 1529 aa28.02■■■□□ 2.08
ARPC4-202ENST00000417500 SRPK2P78362 688 aaKnown RBP28.01■■■□□ 2.07
ARPC4-202ENST00000417500 ATP7BP35670 1465 aa28■■■□□ 2.07
ARPC4-202ENST00000417500 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
ARPC4-202ENST00000417500 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.96■■■□□ 2.07
ARPC4-202ENST00000417500 FAM83GA6ND36 823 aa27.96■■■□□ 2.07
ARPC4-202ENST00000417500 VPS72Q15906 364 aa27.96■■■□□ 2.07
ARPC4-202ENST00000417500 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.07
ARPC4-202ENST00000417500 ACEP12821 1306 aa27.94■■■□□ 2.06
ARPC4-202ENST00000417500 RALGAPBQ86X10 1494 aa27.94■■■□□ 2.06
ARPC4-202ENST00000417500 PLEKHG3A1L390 1219 aa27.93■■■□□ 2.06
ARPC4-202ENST00000417500 NBPF8Q3BBV2 869 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms