RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
HDAC9-208ENST00000417496 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
HDAC9-208ENST00000417496 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
HDAC9-208ENST00000417496 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
HDAC9-208ENST00000417496 ZNF518AQ6AHZ1 1483 aa18.72■□□□□ 0.59
HDAC9-208ENST00000417496 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
HDAC9-208ENST00000417496 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
HDAC9-208ENST00000417496 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
HDAC9-208ENST00000417496 PDE3AQ14432 1141 aa18.71■□□□□ 0.59
HDAC9-208ENST00000417496 RLBP1P12271 317 aa18.71■□□□□ 0.59
HDAC9-208ENST00000417496 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
HDAC9-208ENST00000417496 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
HDAC9-208ENST00000417496 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
HDAC9-208ENST00000417496 IFT172Q9UG01 1749 aa18.7■□□□□ 0.58
HDAC9-208ENST00000417496 CGNL1Q0VF96 1302 aa18.7■□□□□ 0.58
HDAC9-208ENST00000417496 SEC24BO95487 1268 aa18.69■□□□□ 0.58
HDAC9-208ENST00000417496 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
HDAC9-208ENST00000417496 NGEFQ8N5V2 710 aa18.69■□□□□ 0.58
HDAC9-208ENST00000417496 STK26Q9P289 416 aa18.69■□□□□ 0.58
HDAC9-208ENST00000417496 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
HDAC9-208ENST00000417496 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
HDAC9-208ENST00000417496 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
HDAC9-208ENST00000417496 ADGRB1O14514 1584 aa18.67■□□□□ 0.58
HDAC9-208ENST00000417496 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
HDAC9-208ENST00000417496 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
HDAC9-208ENST00000417496 MYO3AQ8NEV4 1616 aa18.66■□□□□ 0.58
HDAC9-208ENST00000417496 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
HDAC9-208ENST00000417496 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
HDAC9-208ENST00000417496 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
HDAC9-208ENST00000417496 EVC2Q86UK5 1308 aa18.64■□□□□ 0.58
HDAC9-208ENST00000417496 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
HDAC9-208ENST00000417496 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.57
HDAC9-208ENST00000417496 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
HDAC9-208ENST00000417496 POGZQ7Z3K3 1410 aa18.64■□□□□ 0.57
HDAC9-208ENST00000417496 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
HDAC9-208ENST00000417496 IDI1Q13907 227 aa18.63■□□□□ 0.57
HDAC9-208ENST00000417496 USP19O94966 1318 aa18.63■□□□□ 0.57
HDAC9-208ENST00000417496 TSR2Q969E8 191 aaKnown RBP18.63■□□□□ 0.57
HDAC9-208ENST00000417496 GGNBP2Q9H3C7 697 aa18.63■□□□□ 0.57
HDAC9-208ENST00000417496 VGFO15240 615 aaPredicted RBP18.62■□□□□ 0.57
HDAC9-208ENST00000417496 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
HDAC9-208ENST00000417496 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
HDAC9-208ENST00000417496 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
HDAC9-208ENST00000417496 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
HDAC9-208ENST00000417496 IQSEC2Q5JU85 1478 aa18.6■□□□□ 0.57
HDAC9-208ENST00000417496 PPLO60437 1756 aa18.6■□□□□ 0.57
HDAC9-208ENST00000417496 FRAT2O75474 233 aaPredicted RBP18.6■□□□□ 0.57
HDAC9-208ENST00000417496 RTN4Q9NQC3 1192 aaKnown RBP18.59■□□□□ 0.57
HDAC9-208ENST00000417496 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
HDAC9-208ENST00000417496 ABCC3O15438 1527 aa18.58■□□□□ 0.57
HDAC9-208ENST00000417496 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
HDAC9-208ENST00000417496 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.56
HDAC9-208ENST00000417496 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
HDAC9-208ENST00000417496 GSE1Q14687 1217 aa18.57■□□□□ 0.56
HDAC9-208ENST00000417496 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
HDAC9-208ENST00000417496 PDZRN3Q9UPQ7 1066 aa18.57■□□□□ 0.56
HDAC9-208ENST00000417496 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
HDAC9-208ENST00000417496 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
HDAC9-208ENST00000417496 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
HDAC9-208ENST00000417496 A0A1W2PP64 1363 aa18.56■□□□□ 0.56
HDAC9-208ENST00000417496 GLI2P10070 1586 aa18.55■□□□□ 0.56
HDAC9-208ENST00000417496 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
HDAC9-208ENST00000417496 PMFBP1Q8TBY8 1022 aa18.55■□□□□ 0.56
HDAC9-208ENST00000417496 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
HDAC9-208ENST00000417496 EXOSC9Q06265 439 aaKnown RBP18.54■□□□□ 0.56
HDAC9-208ENST00000417496 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
HDAC9-208ENST00000417496 FBLN1P23142 703 aa18.54■□□□□ 0.56
HDAC9-208ENST00000417496 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
HDAC9-208ENST00000417496 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
HDAC9-208ENST00000417496 FYB1O15117 783 aa18.53■□□□□ 0.56
HDAC9-208ENST00000417496 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
HDAC9-208ENST00000417496 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
HDAC9-208ENST00000417496 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
HDAC9-208ENST00000417496 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.55
HDAC9-208ENST00000417496 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.55
HDAC9-208ENST00000417496 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.55
HDAC9-208ENST00000417496 FBXO31Q5XUX0 539 aaPredicted RBP18.51■□□□□ 0.55
HDAC9-208ENST00000417496 SLKQ9H2G2 1235 aaPredicted RBP18.51■□□□□ 0.55
HDAC9-208ENST00000417496 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
HDAC9-208ENST00000417496 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
HDAC9-208ENST00000417496 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
HDAC9-208ENST00000417496 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
HDAC9-208ENST00000417496 POGKQ9P215 609 aa18.51■□□□□ 0.55
HDAC9-208ENST00000417496 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
HDAC9-208ENST00000417496 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
HDAC9-208ENST00000417496 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
HDAC9-208ENST00000417496 TRIM27P14373 513 aa18.49■□□□□ 0.55
HDAC9-208ENST00000417496 CAMSAP1Q5T5Y3 1602 aa18.48■□□□□ 0.55
HDAC9-208ENST00000417496 NSD2O96028 1365 aa18.48■□□□□ 0.55
HDAC9-208ENST00000417496 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
HDAC9-208ENST00000417496 ARHGEF28Q8N1W1 1705 aaKnown RBP18.48■□□□□ 0.55
HDAC9-208ENST00000417496 RIPK4P57078 832 aa18.48■□□□□ 0.55
HDAC9-208ENST00000417496 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
HDAC9-208ENST00000417496 YEATS2Q9ULM3 1422 aa18.47■□□□□ 0.55
HDAC9-208ENST00000417496 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
HDAC9-208ENST00000417496 NOB1Q9ULX3 412 aaKnown RBP18.47■□□□□ 0.55
HDAC9-208ENST00000417496 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
HDAC9-208ENST00000417496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.46■□□□□ 0.55
HDAC9-208ENST00000417496 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
HDAC9-208ENST00000417496 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms