RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 NLRP1Q9C000 1473 aa8.09□□□□□ -1.11
CCNT1-202ENST00000417344 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
CCNT1-202ENST00000417344 ZSCAN20P17040 1043 aaPredicted RBP8.09□□□□□ -1.11
CCNT1-202ENST00000417344 R3HCC1Q9Y3T6 440 aaKnown RBP8.09□□□□□ -1.11
CCNT1-202ENST00000417344 UQCRHLA0A096LP55 91 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 TULP1O00294 542 aaPredicted RBP8.08□□□□□ -1.12
CCNT1-202ENST00000417344 SLC34A2O95436 690 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 UQCRHP07919 91 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 PPP1R9BQ96SB3 815 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 ARID3AQ99856 593 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 CHMP5Q9NZZ3 219 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
CCNT1-202ENST00000417344 TEX14Q8IWB6 1497 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 KIF20AO95235 890 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 CCDC94Q9BW85 323 aaPredicted RBP8.08□□□□□ -1.12
CCNT1-202ENST00000417344 EMILIN3Q9NT22 766 aa8.08□□□□□ -1.12
CCNT1-202ENST00000417344 ZNF326Q5BKZ1 582 aaKnown RBP8.07□□□□□ -1.12
CCNT1-202ENST00000417344 GAS2L3Q86XJ1 694 aa8.07□□□□□ -1.12
CCNT1-202ENST00000417344 MPHOSPH9Q99550 1183 aa8.07□□□□□ -1.12
CCNT1-202ENST00000417344 UPF2Q9HAU5 1272 aaKnown RBP8.07□□□□□ -1.12
CCNT1-202ENST00000417344 TMEM51Q9NW97 253 aa8.07□□□□□ -1.12
CCNT1-202ENST00000417344 RPRD2Q5VT52 1461 aaKnown RBP8.07□□□□□ -1.12
CCNT1-202ENST00000417344 PDIA6Q15084 440 aa8.07□□□□□ -1.12
CCNT1-202ENST00000417344 ANP32BQ92688 251 aaKnown RBP8.07□□□□□ -1.12
CCNT1-202ENST00000417344 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
CCNT1-202ENST00000417344 GTPBP4Q9BZE4 634 aaKnown RBP8.07□□□□□ -1.12
CCNT1-202ENST00000417344 USP47Q96K76 1375 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 FYCO1Q9BQS8 1478 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 OXER1Q8TDS5 423 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 MAPK8IP3Q9UPT6 1336 aa8.06□□□□□ -1.12
CCNT1-202ENST00000417344 POTEB2H3BUK9 544 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.05□□□□□ -1.12
CCNT1-202ENST00000417344 INSRP06213 1382 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 VIRMAQ69YN4 1812 aaKnown RBP8.05□□□□□ -1.12
CCNT1-202ENST00000417344 PLEKHH2Q8IVE3 1493 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 DPYSL4O14531 572 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 TBC1D12O60347 775 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 LETM1O95202 739 aaPredicted RBP8.05□□□□□ -1.12
CCNT1-202ENST00000417344 SMYD5Q6GMV2 418 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 PTCD2Q8WV60 388 aaKnown RBP8.05□□□□□ -1.12
CCNT1-202ENST00000417344 BCORL1Q5H9F3 1711 aa8.05□□□□□ -1.12
CCNT1-202ENST00000417344 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
CCNT1-202ENST00000417344 ZNF500O60304 480 aaPredicted RBP8.04□□□□□ -1.12
CCNT1-202ENST00000417344 NASPP49321 788 aaPredicted RBP8.04□□□□□ -1.12
CCNT1-202ENST00000417344 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
CCNT1-202ENST00000417344 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
CCNT1-202ENST00000417344 RRP7BPQ9NSQ0 103 aa8.04□□□□□ -1.12
CCNT1-202ENST00000417344 ANKRD30BQ9BXX2 1392 aa8.04□□□□□ -1.12
CCNT1-202ENST00000417344 BLMP54132 1417 aaPredicted RBP8.04□□□□□ -1.12
CCNT1-202ENST00000417344 MAP3K9P80192 1104 aa8.03□□□□□ -1.12
CCNT1-202ENST00000417344 EIF3AQ14152 1382 aaKnown RBP8.03□□□□□ -1.12
CCNT1-202ENST00000417344 CASKIN1Q8WXD9 1431 aa8.03□□□□□ -1.12
CCNT1-202ENST00000417344 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CCNT1-202ENST00000417344 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
CCNT1-202ENST00000417344 ZMYM4Q5VZL5 1548 aa8.03□□□□□ -1.12
CCNT1-202ENST00000417344 TAF3Q5VWG9 929 aa8.02□□□□□ -1.13
CCNT1-202ENST00000417344 SLAIN1Q8ND83 568 aa8.02□□□□□ -1.13
CCNT1-202ENST00000417344 NOL7Q9UMY1 257 aaKnown RBP8.02□□□□□ -1.13
CCNT1-202ENST00000417344 PARD3Q8TEW0 1356 aa8.02□□□□□ -1.13
CCNT1-202ENST00000417344 PTMSP20962 102 aa8.02□□□□□ -1.13
CCNT1-202ENST00000417344 SASS6Q6UVJ0 657 aa8.02□□□□□ -1.13
CCNT1-202ENST00000417344 ZNF830Q96NB3 372 aaPredicted RBP8.02□□□□□ -1.13
CCNT1-202ENST00000417344 GCC2Q8IWJ2 1684 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 MTUS2Q5JR59 1369 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 VGLL3A8MV65 326 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 SEMA3EO15041 775 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 IGHDP01880 384 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
CCNT1-202ENST00000417344 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
CCNT1-202ENST00000417344 THOC2Q8NI27 1593 aaKnown RBP8.01□□□□□ -1.13
CCNT1-202ENST00000417344 KDM5CP41229 1560 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 RIMBP2O15034 1052 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.13
CCNT1-202ENST00000417344 GBP4Q96PP9 640 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 ZSWIM6Q9HCJ5 1215 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
CCNT1-202ENST00000417344 CCDC144AA2RUR9 1427 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 FHOD3Q2V2M9 1422 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 IGF1RP08069 1367 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 ZMYM3Q14202 1370 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 SNPHO15079 494 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
CCNT1-202ENST00000417344 KDM6BO15054 1643 aa7.99□□□□□ -1.13
CCNT1-202ENST00000417344 MBD5Q9P267 1494 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 DDIT3P35638 169 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 CBX1P83916 185 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 TNPO1Q92973 898 aaKnown RBP7.98□□□□□ -1.13
CCNT1-202ENST00000417344 SCAPERQ9BY12 1400 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 IBTKQ9P2D0 1353 aaPredicted RBP7.98□□□□□ -1.13
CCNT1-202ENST00000417344 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
CCNT1-202ENST00000417344 MCM5P33992 734 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 PTGER2P43116 358 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCNT1-202ENST00000417344 HSCBQ8IWL3 235 aa7.98□□□□□ -1.13
CCNT1-202ENST00000417344 ZKSCAN5Q9Y2L8 839 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms