RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 PRAG1Q86YV5 1406 aa21.07■□□□□ 0.96
SSB-204ENST00000417292 GJD4Q96KN9 370 aaPredicted RBP21.05■□□□□ 0.96
SSB-204ENST00000417292 PXDNQ92626 1479 aa21.05■□□□□ 0.96
SSB-204ENST00000417292 KIF1BO60333 1816 aa21.04■□□□□ 0.96
SSB-204ENST00000417292 MARF1Q9Y4F3 1742 aaKnown RBP21.04■□□□□ 0.96
SSB-204ENST00000417292 HFM1A2PYH4 1435 aa21.03■□□□□ 0.96
SSB-204ENST00000417292 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
SSB-204ENST00000417292 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
SSB-204ENST00000417292 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
SSB-204ENST00000417292 ESCO1Q5FWF5 840 aa21.02■□□□□ 0.96
SSB-204ENST00000417292 FOXO3O43524 673 aa21■□□□□ 0.95
SSB-204ENST00000417292 CDC42BPGQ6DT37 1551 aa20.99■□□□□ 0.95
SSB-204ENST00000417292 GLI3P10071 1580 aa20.98■□□□□ 0.95
SSB-204ENST00000417292 BLMP54132 1417 aaPredicted RBP20.97■□□□□ 0.95
SSB-204ENST00000417292 RALGAPBQ86X10 1494 aa20.97■□□□□ 0.95
SSB-204ENST00000417292 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.97■□□□□ 0.95
SSB-204ENST00000417292 DEFB132Q7Z7B7 95 aa20.96■□□□□ 0.95
SSB-204ENST00000417292 SLIT2O94813 1529 aa20.95■□□□□ 0.94
SSB-204ENST00000417292 UNC5CLQ8IV45 518 aa20.95■□□□□ 0.94
SSB-204ENST00000417292 RPGRIP1LQ68CZ1 1315 aa20.94■□□□□ 0.94
SSB-204ENST00000417292 NUTM2FA1L443 756 aa20.93■□□□□ 0.94
SSB-204ENST00000417292 NAIPQ13075 1403 aa20.93■□□□□ 0.94
SSB-204ENST00000417292 PPLO60437 1756 aa20.92■□□□□ 0.94
SSB-204ENST00000417292 BRWD3Q6RI45 1802 aa20.92■□□□□ 0.94
SSB-204ENST00000417292 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
SSB-204ENST00000417292 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
SSB-204ENST00000417292 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
SSB-204ENST00000417292 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
SSB-204ENST00000417292 SEPT12Q8IYM1 358 aa20.88■□□□□ 0.93
SSB-204ENST00000417292 USP32Q8NFA0 1604 aa20.88■□□□□ 0.93
SSB-204ENST00000417292 LRP5O75197 1615 aa20.87■□□□□ 0.93
SSB-204ENST00000417292 STK26Q9P289 416 aa20.87■□□□□ 0.93
SSB-204ENST00000417292 TECPR2O15040 1411 aa20.87■□□□□ 0.93
SSB-204ENST00000417292 PLEKHH1Q9ULM0 1364 aa20.85■□□□□ 0.93
SSB-204ENST00000417292 ADGRF5Q8IZF2 1346 aa20.85■□□□□ 0.93
SSB-204ENST00000417292 SF3B2Q13435 895 aaKnown RBP20.85■□□□□ 0.93
SSB-204ENST00000417292 ONECUT3O60422 494 aaPredicted RBP20.83■□□□□ 0.93
SSB-204ENST00000417292 VPS72Q15906 364 aa20.83■□□□□ 0.93
SSB-204ENST00000417292 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
SSB-204ENST00000417292 CCDC144AA2RUR9 1427 aa20.83■□□□□ 0.93
SSB-204ENST00000417292 FMN2Q9NZ56 1722 aa20.83■□□□□ 0.92
SSB-204ENST00000417292 CABLES1Q8TDN4 633 aa20.82■□□□□ 0.92
SSB-204ENST00000417292 KIF1AQ12756 1690 aa20.82■□□□□ 0.92
SSB-204ENST00000417292 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
SSB-204ENST00000417292 KRT27Q7Z3Y8 459 aa20.81■□□□□ 0.92
SSB-204ENST00000417292 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
SSB-204ENST00000417292 ABCC11Q96J66 1382 aa20.81■□□□□ 0.92
SSB-204ENST00000417292 PLCH1Q4KWH8 1693 aa20.8■□□□□ 0.92
SSB-204ENST00000417292 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
SSB-204ENST00000417292 TMEM132EQ6IEE7 984 aa20.8■□□□□ 0.92
SSB-204ENST00000417292 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
SSB-204ENST00000417292 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
SSB-204ENST00000417292 KNDC1Q76NI1 1749 aa20.78■□□□□ 0.92
SSB-204ENST00000417292 NWD2Q9ULI1 1742 aa20.78■□□□□ 0.92
SSB-204ENST00000417292 CCDC9Q9Y3X0 531 aaKnown RBP20.78■□□□□ 0.92
SSB-204ENST00000417292 HRCP23327 699 aa20.77■□□□□ 0.92
SSB-204ENST00000417292 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.92
SSB-204ENST00000417292 RGPD8O14715 1765 aaPredicted RBP20.76■□□□□ 0.91
SSB-204ENST00000417292 ABCA3Q99758 1704 aa20.75■□□□□ 0.91
SSB-204ENST00000417292 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
SSB-204ENST00000417292 PHF8Q9UPP1 1060 aa20.75■□□□□ 0.91
SSB-204ENST00000417292 SPATA31E1Q6ZUB1 1445 aa20.75■□□□□ 0.91
SSB-204ENST00000417292 FAM83GA6ND36 823 aa20.74■□□□□ 0.91
SSB-204ENST00000417292 IFT172Q9UG01 1749 aa20.74■□□□□ 0.91
SSB-204ENST00000417292 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
SSB-204ENST00000417292 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
SSB-204ENST00000417292 BAG6P46379 1132 aa20.73■□□□□ 0.91
SSB-204ENST00000417292 PSME1Q06323 249 aa20.73■□□□□ 0.91
SSB-204ENST00000417292 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
SSB-204ENST00000417292 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
SSB-204ENST00000417292 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
SSB-204ENST00000417292 LMOD2Q6P5Q4 547 aa20.71■□□□□ 0.91
SSB-204ENST00000417292 A0A0G2JS52 829 aa20.7■□□□□ 0.9
SSB-204ENST00000417292 MYT1Q01538 1121 aa20.7■□□□□ 0.9
SSB-204ENST00000417292 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
SSB-204ENST00000417292 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
SSB-204ENST00000417292 SIRT1Q96EB6 747 aa20.69■□□□□ 0.9
SSB-204ENST00000417292 NRAPQ86VF7 1730 aa20.69■□□□□ 0.9
SSB-204ENST00000417292 ARHGEF10O15013 1369 aa20.69■□□□□ 0.9
SSB-204ENST00000417292 FAM182BQ5T319 152 aa20.68■□□□□ 0.9
SSB-204ENST00000417292 R3HDM1Q15032 1099 aaKnown RBP20.66■□□□□ 0.9
SSB-204ENST00000417292 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
SSB-204ENST00000417292 PMFBP1Q8TBY8 1022 aa20.65■□□□□ 0.9
SSB-204ENST00000417292 RGPD1P0DJD0 1748 aa20.64■□□□□ 0.9
SSB-204ENST00000417292 C14orf93Q9H972 538 aaKnown RBP20.64■□□□□ 0.89
SSB-204ENST00000417292 SAFB2Q14151 953 aaKnown RBP eCLIP20.63■□□□□ 0.89
SSB-204ENST00000417292 PRAM1Q96QH2 718 aa20.62■□□□□ 0.89
SSB-204ENST00000417292 DISP2A7MBM2 1401 aa20.61■□□□□ 0.89
SSB-204ENST00000417292 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
SSB-204ENST00000417292 CFAP70Q5T0N1 1121 aa20.61■□□□□ 0.89
SSB-204ENST00000417292 COL14A1Q05707 1796 aaKnown RBP20.61■□□□□ 0.89
SSB-204ENST00000417292 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
SSB-204ENST00000417292 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
SSB-204ENST00000417292 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
SSB-204ENST00000417292 ALS2Q96Q42 1657 aa20.59■□□□□ 0.89
SSB-204ENST00000417292 THSD7AQ9UPZ6 1657 aa20.59■□□□□ 0.89
SSB-204ENST00000417292 EZH2Q15910 746 aaKnown RBP20.59■□□□□ 0.89
SSB-204ENST00000417292 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
SSB-204ENST00000417292 DHX57Q6P158 1386 aaKnown RBP20.59■□□□□ 0.89
SSB-204ENST00000417292 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms