RNA–Protein interactions for RNA: ENST00000417256.3

CT47A9-201, Transcript of cancer/testis antigen family 47, member A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CT47A9, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT47A9-201ENST00000417256 PRAM1Q96QH2 718 aa26.4■■□□□ 1.82
CT47A9-201ENST00000417256 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
CT47A9-201ENST00000417256 ATF3P18847 181 aa26.39■■□□□ 1.82
CT47A9-201ENST00000417256 WAPLQ7Z5K2 1190 aa26.39■■□□□ 1.82
CT47A9-201ENST00000417256 CARD11Q9BXL7 1154 aa26.38■■□□□ 1.81
CT47A9-201ENST00000417256 EIF3AQ14152 1382 aaKnown RBP26.36■■□□□ 1.81
CT47A9-201ENST00000417256 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
CT47A9-201ENST00000417256 PLEKHH1Q9ULM0 1364 aa26.34■■□□□ 1.81
CT47A9-201ENST00000417256 SLAIN2Q9P270 581 aa26.32■■□□□ 1.8
CT47A9-201ENST00000417256 CENPJQ9HC77 1338 aaPredicted RBP26.31■■□□□ 1.8
CT47A9-201ENST00000417256 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
CT47A9-201ENST00000417256 CDC42BPGQ6DT37 1551 aa26.29■■□□□ 1.8
CT47A9-201ENST00000417256 SLC24A1O60721 1099 aa26.28■■□□□ 1.8
CT47A9-201ENST00000417256 ARHGEF28Q8N1W1 1705 aaKnown RBP26.28■■□□□ 1.8
CT47A9-201ENST00000417256 SAFB2Q14151 953 aaKnown RBP eCLIP26.27■■□□□ 1.8
CT47A9-201ENST00000417256 NALCNQ8IZF0 1738 aa26.27■■□□□ 1.8
CT47A9-201ENST00000417256 ADGRB2O60241 1585 aa26.24■■□□□ 1.79
CT47A9-201ENST00000417256 MINK1Q8N4C8 1332 aaPredicted RBP26.23■■□□□ 1.79
CT47A9-201ENST00000417256 MST1RQ04912 1400 aa26.22■■□□□ 1.79
CT47A9-201ENST00000417256 SBNO2Q9Y2G9 1366 aa26.22■■□□□ 1.79
CT47A9-201ENST00000417256 WASLO00401 505 aaPredicted RBP26.22■■□□□ 1.79
CT47A9-201ENST00000417256 PIP4K2BP78356 416 aa26.21■■□□□ 1.79
CT47A9-201ENST00000417256 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
CT47A9-201ENST00000417256 C1orf167Q5SNV9 1468 aa26.18■■□□□ 1.78
CT47A9-201ENST00000417256 ANKARQ7Z5J8 1434 aa26.18■■□□□ 1.78
CT47A9-201ENST00000417256 HIRIP3Q9BW71 556 aaPredicted RBP26.17■■□□□ 1.78
CT47A9-201ENST00000417256 USP47Q96K76 1375 aa26.17■■□□□ 1.78
CT47A9-201ENST00000417256 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
CT47A9-201ENST00000417256 BRINP3Q76B58 766 aa26.14■■□□□ 1.78
CT47A9-201ENST00000417256 CDK19Q9BWU1 502 aa26.14■■□□□ 1.78
CT47A9-201ENST00000417256 ST20-MTHFSA0A0A6YYL1 179 aa26.13■■□□□ 1.77
CT47A9-201ENST00000417256 ZEB1P37275 1124 aaPredicted RBP26.13■■□□□ 1.77
CT47A9-201ENST00000417256 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
CT47A9-201ENST00000417256 TULP4Q9NRJ4 1543 aa26.11■■□□□ 1.77
CT47A9-201ENST00000417256 EIF4G2P78344 907 aaKnown RBP eCLIP26.11■■□□□ 1.77
CT47A9-201ENST00000417256 PUS7Q96PZ0 661 aaKnown RBP26.11■■□□□ 1.77
CT47A9-201ENST00000417256 QRICH2Q9H0J4 1663 aa26.11■■□□□ 1.77
CT47A9-201ENST00000417256 ESCO1Q5FWF5 840 aa26.1■■□□□ 1.77
CT47A9-201ENST00000417256 SRPK2P78362 688 aaKnown RBP26.08■■□□□ 1.77
CT47A9-201ENST00000417256 TESK2Q96S53 571 aa26.08■■□□□ 1.77
CT47A9-201ENST00000417256 ORAI2Q96SN7 254 aa26.08■■□□□ 1.77
CT47A9-201ENST00000417256 CCDC61Q9Y6R9 512 aa26.08■■□□□ 1.77
CT47A9-201ENST00000417256 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.77
CT47A9-201ENST00000417256 NUDT16Q96DE0 195 aaKnown RBP26.07■■□□□ 1.76
CT47A9-201ENST00000417256 NUTM2FA1L443 756 aa26.06■■□□□ 1.76
CT47A9-201ENST00000417256 PHF8Q9UPP1 1060 aa26.05■■□□□ 1.76
CT47A9-201ENST00000417256 CDCA8Q53HL2 280 aa26.04■■□□□ 1.76
CT47A9-201ENST00000417256 NPHP3Q7Z494 1330 aa26.04■■□□□ 1.76
CT47A9-201ENST00000417256 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
CT47A9-201ENST00000417256 TMF1P82094 1093 aa26.03■■□□□ 1.76
CT47A9-201ENST00000417256 HSPA1LP34931 641 aa26.02■■□□□ 1.76
CT47A9-201ENST00000417256 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
CT47A9-201ENST00000417256 ATP7BP35670 1465 aa26.02■■□□□ 1.76
CT47A9-201ENST00000417256 AHDC1Q5TGY3 1603 aaPredicted RBP26.02■■□□□ 1.76
CT47A9-201ENST00000417256 PLEKHG3A1L390 1219 aa26.01■■□□□ 1.75
CT47A9-201ENST00000417256 CABP2Q9NPB3 220 aa26.01■■□□□ 1.75
CT47A9-201ENST00000417256 KIF1AQ12756 1690 aa25.99■■□□□ 1.75
CT47A9-201ENST00000417256 USP32Q8NFA0 1604 aa25.99■■□□□ 1.75
CT47A9-201ENST00000417256 HSPA5P11021 654 aaKnown RBP25.98■■□□□ 1.75
CT47A9-201ENST00000417256 SOS2Q07890 1332 aaPredicted RBP25.97■■□□□ 1.75
CT47A9-201ENST00000417256 FOXO3O43524 673 aa25.97■■□□□ 1.75
CT47A9-201ENST00000417256 PSME1Q06323 249 aa25.96■■□□□ 1.75
CT47A9-201ENST00000417256 LRRC59Q96AG4 307 aaKnown RBP25.96■■□□□ 1.75
CT47A9-201ENST00000417256 ITSN1Q15811 1721 aa25.95■■□□□ 1.74
CT47A9-201ENST00000417256 NGDNQ8NEJ9 315 aaKnown RBP25.95■■□□□ 1.74
CT47A9-201ENST00000417256 NHSL1Q5SYE7 1610 aa25.95■■□□□ 1.74
CT47A9-201ENST00000417256 POLR3AO14802 1390 aaPredicted RBP25.94■■□□□ 1.74
CT47A9-201ENST00000417256 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
CT47A9-201ENST00000417256 PPIP5K1Q6PFW1 1433 aa25.93■■□□□ 1.74
CT47A9-201ENST00000417256 NINLQ9Y2I6 1382 aa25.93■■□□□ 1.74
CT47A9-201ENST00000417256 KRT28Q7Z3Y7 464 aa25.91■■□□□ 1.74
CT47A9-201ENST00000417256 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
CT47A9-201ENST00000417256 BRD4O60885 1362 aaPredicted RBP25.91■■□□□ 1.74
CT47A9-201ENST00000417256 PHLPP1O60346 1717 aa25.91■■□□□ 1.74
CT47A9-201ENST00000417256 RGPD8O14715 1765 aaPredicted RBP25.9■■□□□ 1.74
CT47A9-201ENST00000417256 ZNF692Q9BU19 519 aaPredicted RBP25.9■■□□□ 1.74
CT47A9-201ENST00000417256 TOPAZ1Q8N9V7 1692 aa25.9■■□□□ 1.74
CT47A9-201ENST00000417256 JCADQ9P266 1359 aa25.89■■□□□ 1.74
CT47A9-201ENST00000417256 ACEP12821 1306 aa25.88■■□□□ 1.73
CT47A9-201ENST00000417256 COL16A1Q07092 1604 aaPredicted RBP25.88■■□□□ 1.73
CT47A9-201ENST00000417256 PXDNQ92626 1479 aa25.88■■□□□ 1.73
CT47A9-201ENST00000417256 SBNO1A3KN83 1393 aa25.88■■□□□ 1.73
CT47A9-201ENST00000417256 DDX17Q92841 729 aaKnown RBP25.88■■□□□ 1.73
CT47A9-201ENST00000417256 TERF2IPQ9NYB0 399 aa25.84■■□□□ 1.73
CT47A9-201ENST00000417256 TMC1Q8TDI8 760 aa25.83■■□□□ 1.73
CT47A9-201ENST00000417256 SPATA31A3Q5VYP0 1347 aa25.83■■□□□ 1.73
CT47A9-201ENST00000417256 HDGFL2Q7Z4V5 671 aaPredicted RBP25.82■■□□□ 1.72
CT47A9-201ENST00000417256 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
CT47A9-201ENST00000417256 XPCQ01831 940 aaPredicted RBP25.81■■□□□ 1.72
CT47A9-201ENST00000417256 SPATA31A6Q5VVP1 1343 aa25.81■■□□□ 1.72
CT47A9-201ENST00000417256 ARHGEF10O15013 1369 aa25.81■■□□□ 1.72
CT47A9-201ENST00000417256 SLC12A5Q9H2X9 1139 aa25.8■■□□□ 1.72
CT47A9-201ENST00000417256 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
CT47A9-201ENST00000417256 PNPLA6Q8IY17 1366 aa25.78■■□□□ 1.72
CT47A9-201ENST00000417256 USP6P35125 1406 aa25.78■■□□□ 1.72
CT47A9-201ENST00000417256 KTN1Q86UP2 1357 aaKnown RBP25.75■■□□□ 1.71
CT47A9-201ENST00000417256 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
CT47A9-201ENST00000417256 ANKRD36BQ8N2N9 1353 aa25.74■■□□□ 1.71
CT47A9-201ENST00000417256 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
CT47A9-201ENST00000417256 PAK3O75914 559 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms