RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
UBR4-205ENST00000417040 EVC2Q86UK5 1308 aa14.54□□□□□ -0.08
UBR4-205ENST00000417040 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
UBR4-205ENST00000417040 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
UBR4-205ENST00000417040 ANKRD20A12PQ8NF67 263 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 TMX4Q9H1E5 349 aaPredicted RBP14.53□□□□□ -0.08
UBR4-205ENST00000417040 HSP90B2PQ58FF3 399 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 RNF20Q5VTR2 975 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 FIBPO43427 364 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 MAP4K4O95819 1239 aaPredicted RBP14.53□□□□□ -0.08
UBR4-205ENST00000417040 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.085e-7■□□□□ 9.8
UBR4-205ENST00000417040 NEK4P51957 841 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 BACH2Q9BYV9 841 aa14.53□□□□□ -0.08
UBR4-205ENST00000417040 CCDC184Q52MB2 194 aa14.52□□□□□ -0.08
UBR4-205ENST00000417040 CALRP27797 417 aaKnown RBP14.52□□□□□ -0.09
UBR4-205ENST00000417040 TEFQ10587 303 aa14.52□□□□□ -0.09
UBR4-205ENST00000417040 HOOK1Q9UJC3 728 aaKnown RBP14.52□□□□□ -0.09
UBR4-205ENST00000417040 DHX16O60231 1041 aaKnown RBP14.52□□□□□ -0.09
UBR4-205ENST00000417040 AIMP1Q12904 312 aaKnown RBP14.52□□□□□ -0.09
UBR4-205ENST00000417040 MAP7D2Q96T17 732 aa14.52□□□□□ -0.09
UBR4-205ENST00000417040 TSPYL4Q9UJ04 414 aa14.52□□□□□ -0.09
UBR4-205ENST00000417040 FYB1O15117 783 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 PODXL2Q9NZ53 605 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 ERICH4A6NGS2 130 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 H0YHG0 523 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 BRPF1P55201 1214 aaPredicted RBP14.51□□□□□ -0.09
UBR4-205ENST00000417040 OLFM4Q6UX06 510 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 CPLX2Q6PUV4 134 aaKnown RBP14.51□□□□□ -0.09
UBR4-205ENST00000417040 SDF4Q9BRK5 362 aa14.51□□□□□ -0.09
UBR4-205ENST00000417040 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
UBR4-205ENST00000417040 GGNBP2Q9H3C7 697 aa14.5□□□□□ -0.09
UBR4-205ENST00000417040 NEXNQ0ZGT2 675 aa14.5□□□□□ -0.09
UBR4-205ENST00000417040 STK3Q13188 491 aa14.49□□□□□ -0.09
UBR4-205ENST00000417040 MTERF4Q7Z6M4 381 aaKnown RBP14.49□□□□□ -0.09
UBR4-205ENST00000417040 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
UBR4-205ENST00000417040 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.49□□□□□ -0.09
UBR4-205ENST00000417040 TRDNQ13061 729 aa14.49□□□□□ -0.09
UBR4-205ENST00000417040 FAM177A1Q8N128 213 aaPredicted RBP14.49□□□□□ -0.09
UBR4-205ENST00000417040 ACBD3Q9H3P7 528 aa14.49□□□□□ -0.09
UBR4-205ENST00000417040 ROCK1Q13464 1354 aa14.49□□□□□ -0.09
UBR4-205ENST00000417040 PLCD4Q9BRC7 762 aa14.48□□□□□ -0.09
UBR4-205ENST00000417040 TSR2Q969E8 191 aaKnown RBP14.48□□□□□ -0.09
UBR4-205ENST00000417040 NAT10Q9H0A0 1025 aaKnown RBP14.48□□□□□ -0.09
UBR4-205ENST00000417040 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
UBR4-205ENST00000417040 WASHC4Q2M389 1173 aa14.48□□□□□ -0.09
UBR4-205ENST00000417040 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
UBR4-205ENST00000417040 CWC15Q9P013 229 aaKnown RBP14.48□□□□□ -0.09
UBR4-205ENST00000417040 CCDC66A2RUB6 948 aa14.47□□□□□ -0.09
UBR4-205ENST00000417040 ATP2B1P20020 1258 aa14.47□□□□□ -0.09
UBR4-205ENST00000417040 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
UBR4-205ENST00000417040 ZNF644Q9H582 1327 aaPredicted RBP14.47□□□□□ -0.09
UBR4-205ENST00000417040 EXOSC9Q06265 439 aaKnown RBP14.47□□□□□ -0.09
UBR4-205ENST00000417040 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
UBR4-205ENST00000417040 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
UBR4-205ENST00000417040 CHMP4CQ96CF2 233 aa14.47□□□□□ -0.09
UBR4-205ENST00000417040 C11orf95C9JLR9 678 aaPredicted RBP14.46□□□□□ -0.09
UBR4-205ENST00000417040 ERICH2A1L162 156 aa14.46□□□□□ -0.09
UBR4-205ENST00000417040 LETM1O95202 739 aaPredicted RBP14.46□□□□□ -0.09
UBR4-205ENST00000417040 DNAJC2Q99543 621 aaKnown RBP14.46□□□□□ -0.1
UBR4-205ENST00000417040 ERC2O15083 957 aa14.46□□□□□ -0.1
UBR4-205ENST00000417040 NUTM2GQ5VZR2 741 aa14.45□□□□□ -0.1
UBR4-205ENST00000417040 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
UBR4-205ENST00000417040 CNTROBQ8N137 903 aa14.45□□□□□ -0.1
UBR4-205ENST00000417040 GNAI1P63096 354 aa14.45□□□□□ -0.1
UBR4-205ENST00000417040 FSD1Q9BTV5 496 aa14.45□□□□□ -0.1
UBR4-205ENST00000417040 HSP90AB3PQ58FF7 597 aa14.44□□□□□ -0.1
UBR4-205ENST00000417040 LEKR1Q6ZMV7 388 aa14.44□□□□□ -0.1
UBR4-205ENST00000417040 AXDND1Q5T1B0 1012 aaPredicted RBP14.44□□□□□ -0.1
UBR4-205ENST00000417040 TCP11L2Q8N4U5 519 aa14.44□□□□□ -0.1
UBR4-205ENST00000417040 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
UBR4-205ENST00000417040 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
UBR4-205ENST00000417040 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
UBR4-205ENST00000417040 RDXP35241 583 aaKnown RBP14.44□□□□□ -0.1
UBR4-205ENST00000417040 CBX1P83916 185 aa14.44□□□□□ -0.1
UBR4-205ENST00000417040 PPP2R1AP30153 589 aa14.44□□□□□ -0.1
UBR4-205ENST00000417040 MTHFSP49914 203 aa14.43□□□□□ -0.1
UBR4-205ENST00000417040 K7ELQ4 463 aaPredicted RBP14.43□□□□□ -0.1
UBR4-205ENST00000417040 TCEAL9Q9UHQ7 104 aa14.43□□□□□ -0.1
UBR4-205ENST00000417040 VPS37DQ86XT2 251 aa14.43□□□□□ -0.1
UBR4-205ENST00000417040 NINLQ9Y2I6 1382 aa14.43□□□□□ -0.1
UBR4-205ENST00000417040 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
UBR4-205ENST00000417040 MBD3O95983 291 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 RIC3Q7Z5B4 369 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 FAM193AP78312 1265 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 LRRFIP1Q32MZ4 808 aaKnown RBP14.42□□□□□ -0.1
UBR4-205ENST00000417040 TSPYL1Q9H0U9 437 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 RALYLQ86SE5 291 aaKnown RBP14.42□□□□□ -0.1
UBR4-205ENST00000417040 KINO60870 393 aaKnown RBP14.42□□□□□ -0.1
UBR4-205ENST00000417040 UACAQ9BZF9 1416 aa14.42□□□□□ -0.1
UBR4-205ENST00000417040 ESPNB1AK53 854 aa14.41□□□□□ -0.1
UBR4-205ENST00000417040 SYTL4Q96C24 671 aaPredicted RBP14.41□□□□□ -0.1
UBR4-205ENST00000417040 SURF6O75683 361 aaKnown RBP14.41□□□□□ -0.1
UBR4-205ENST00000417040 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
UBR4-205ENST00000417040 RABEP1Q15276 862 aa14.41□□□□□ -0.1
UBR4-205ENST00000417040 PSMA5P28066 241 aa14.41□□□□□ -0.1
UBR4-205ENST00000417040 TNMDQ9H2S6 317 aa14.41□□□□□ -0.1
UBR4-205ENST00000417040 EPS15P42566 896 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms