RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
ATG4AP1-201ENST00000416893 BICRAQ9NZM4 1560 aa9.29□□□□□ -0.92
ATG4AP1-201ENST00000416893 IRF6O14896 467 aa9.28□□□□□ -0.92
ATG4AP1-201ENST00000416893 FOXC1Q12948 553 aa9.28□□□□□ -0.92
ATG4AP1-201ENST00000416893 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
ATG4AP1-201ENST00000416893 RNF19BQ6ZMZ0 732 aa9.28□□□□□ -0.92
ATG4AP1-201ENST00000416893 CD2BP2O95400 341 aaKnown RBP9.26□□□□□ -0.93
ATG4AP1-201ENST00000416893 Q3C1V9 767 aa9.26□□□□□ -0.93
ATG4AP1-201ENST00000416893 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
ATG4AP1-201ENST00000416893 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
ATG4AP1-201ENST00000416893 KDM4AO75164 1064 aa9.24□□□□□ -0.93
ATG4AP1-201ENST00000416893 ZBTB24O43167 697 aaPredicted RBP9.23□□□□□ -0.93
ATG4AP1-201ENST00000416893 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
ATG4AP1-201ENST00000416893 ZNF775Q96BV0 537 aaPredicted RBP9.22□□□□□ -0.93
ATG4AP1-201ENST00000416893 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
ATG4AP1-201ENST00000416893 MMP16P51512 607 aa9.21□□□□□ -0.94
ATG4AP1-201ENST00000416893 USP46P62068 366 aa9.21□□□□□ -0.94
ATG4AP1-201ENST00000416893 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
ATG4AP1-201ENST00000416893 TOR4AQ9NXH8 423 aa9.21□□□□□ -0.94
ATG4AP1-201ENST00000416893 POTECB2RU33 542 aa9.2□□□□□ -0.94
ATG4AP1-201ENST00000416893 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
ATG4AP1-201ENST00000416893 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
ATG4AP1-201ENST00000416893 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
ATG4AP1-201ENST00000416893 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
ATG4AP1-201ENST00000416893 HLA-CQ95604 372 aa9.19□□□□□ -0.94
ATG4AP1-201ENST00000416893 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
ATG4AP1-201ENST00000416893 HOXA2O43364 376 aa9.18□□□□□ -0.94
ATG4AP1-201ENST00000416893 ZMYND10O75800 440 aa9.18□□□□□ -0.94
ATG4AP1-201ENST00000416893 CLCN1P35523 988 aa9.18□□□□□ -0.94
ATG4AP1-201ENST00000416893 SHROOM4Q9ULL8 1493 aa9.18□□□□□ -0.94
ATG4AP1-201ENST00000416893 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
ATG4AP1-201ENST00000416893 AVPP01185 164 aa9.17□□□□□ -0.94
ATG4AP1-201ENST00000416893 TRIM32Q13049 653 aa9.17□□□□□ -0.94
ATG4AP1-201ENST00000416893 CRIPAKQ8N1N5 446 aa9.17□□□□□ -0.94
ATG4AP1-201ENST00000416893 FAM217BQ9NTX9 383 aaPredicted RBP9.17□□□□□ -0.94
ATG4AP1-201ENST00000416893 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
ATG4AP1-201ENST00000416893 WNT7AO00755 349 aa9.15□□□□□ -0.94
ATG4AP1-201ENST00000416893 GUCA2AQ02747 115 aa9.15□□□□□ -0.94
ATG4AP1-201ENST00000416893 TTC24A2A3L6 582 aaPredicted RBP9.14□□□□□ -0.95
ATG4AP1-201ENST00000416893 AXIN1O15169 862 aa9.13□□□□□ -0.95
ATG4AP1-201ENST00000416893 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
ATG4AP1-201ENST00000416893 NUTM1Q86Y26 1132 aa9.13□□□□□ -0.95
ATG4AP1-201ENST00000416893 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
ATG4AP1-201ENST00000416893 SNIP1Q8TAD8 396 aaKnown RBP9.12□□□□□ -0.95
ATG4AP1-201ENST00000416893 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
ATG4AP1-201ENST00000416893 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
ATG4AP1-201ENST00000416893 MRGPRX2Q96LB1 330 aa9.11□□□□□ -0.95
ATG4AP1-201ENST00000416893 JUNDP17535 347 aa9.1□□□□□ -0.95
ATG4AP1-201ENST00000416893 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
ATG4AP1-201ENST00000416893 REPIN1Q9BWE0 567 aaKnown RBP9.1□□□□□ -0.95
ATG4AP1-201ENST00000416893 SMPD1P17405 629 aa9.09□□□□□ -0.95
ATG4AP1-201ENST00000416893 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
ATG4AP1-201ENST00000416893 GMPR2Q9P2T1 348 aaKnown RBP9.08□□□□□ -0.96
ATG4AP1-201ENST00000416893 FDX1P10109 184 aa9.07□□□□□ -0.96
ATG4AP1-201ENST00000416893 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
ATG4AP1-201ENST00000416893 WNT7BP56706 349 aa9.07□□□□□ -0.96
ATG4AP1-201ENST00000416893 J3QL48 77 aa9.06□□□□□ -0.96
ATG4AP1-201ENST00000416893 SKOR1P84550 965 aa9.06□□□□□ -0.96
ATG4AP1-201ENST00000416893 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
ATG4AP1-201ENST00000416893 AK7Q96M32 723 aa9.06□□□□□ -0.96
ATG4AP1-201ENST00000416893 PCDHGC3Q9UN70 934 aa9.06□□□□□ -0.96
ATG4AP1-201ENST00000416893 TTLL12Q14166 644 aaPredicted RBP9.05□□□□□ -0.96
ATG4AP1-201ENST00000416893 AMHR2Q16671 573 aa9.05□□□□□ -0.96
ATG4AP1-201ENST00000416893 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
ATG4AP1-201ENST00000416893 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
ATG4AP1-201ENST00000416893 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
ATG4AP1-201ENST00000416893 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
ATG4AP1-201ENST00000416893 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
ATG4AP1-201ENST00000416893 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
ATG4AP1-201ENST00000416893 PTCRAQ6ISU1 281 aaPredicted RBP9.02□□□□□ -0.97
ATG4AP1-201ENST00000416893 HPS1Q92902 700 aa9.02□□□□□ -0.97
ATG4AP1-201ENST00000416893 TRIM66O15016 1216 aa9.01□□□□□ -0.97
ATG4AP1-201ENST00000416893 MS4A1P11836 297 aa9.01□□□□□ -0.97
ATG4AP1-201ENST00000416893 NDUFV2P19404 249 aa9.01□□□□□ -0.97
ATG4AP1-201ENST00000416893 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
ATG4AP1-201ENST00000416893 MOXD2PA6NHM9 499 aa9□□□□□ -0.97
ATG4AP1-201ENST00000416893 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
ATG4AP1-201ENST00000416893 LCE2AQ5TA79 106 aaPredicted RBP9□□□□□ -0.97
ATG4AP1-201ENST00000416893 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
ATG4AP1-201ENST00000416893 CC2D2AQ9P2K1 1620 aa8.99□□□□□ -0.97
ATG4AP1-201ENST00000416893 ALDH1A1P00352 501 aa8.98□□□□□ -0.97
ATG4AP1-201ENST00000416893 PTPRNQ16849 979 aa8.98□□□□□ -0.97
ATG4AP1-201ENST00000416893 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
ATG4AP1-201ENST00000416893 EHBP1Q8NDI1 1231 aa8.98□□□□□ -0.97
ATG4AP1-201ENST00000416893 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
ATG4AP1-201ENST00000416893 SIAH2O43255 324 aa8.97□□□□□ -0.97
ATG4AP1-201ENST00000416893 MTMR2Q13614 643 aa8.97□□□□□ -0.97
ATG4AP1-201ENST00000416893 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
ATG4AP1-201ENST00000416893 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
ATG4AP1-201ENST00000416893 SH3BP2P78314 561 aa8.96□□□□□ -0.98
ATG4AP1-201ENST00000416893 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
ATG4AP1-201ENST00000416893 UNC93B1Q9H1C4 597 aa8.96□□□□□ -0.98
ATG4AP1-201ENST00000416893 SENP2Q9HC62 589 aa8.96□□□□□ -0.98
ATG4AP1-201ENST00000416893 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
ATG4AP1-201ENST00000416893 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
ATG4AP1-201ENST00000416893 WFS1O76024 890 aa8.95□□□□□ -0.98
ATG4AP1-201ENST00000416893 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
ATG4AP1-201ENST00000416893 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
ATG4AP1-201ENST00000416893 PDE4DQ08499 809 aa8.94□□□□□ -0.98
ATG4AP1-201ENST00000416893 KCNH2Q12809 1159 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms