RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 COL22A1Q8NFW1 1626 aaPredicted RBP32.18■■■□□ 2.74
APTR-202ENST00000416650 RAB3GAP2Q9H2M9 1393 aa32.18■■■□□ 2.74
APTR-202ENST00000416650 MYOM2P54296 1465 aa32.17■■■□□ 2.74
APTR-202ENST00000416650 ORAI2Q96SN7 254 aa32.17■■■□□ 2.74
APTR-202ENST00000416650 NRXN1Q9ULB1 1477 aa32.16■■■□□ 2.74
APTR-202ENST00000416650 SOS2Q07890 1332 aaPredicted RBP32.14■■■□□ 2.74
APTR-202ENST00000416650 ABCC11Q96J66 1382 aa32.14■■■□□ 2.74
APTR-202ENST00000416650 YTHDC2Q9H6S0 1430 aaKnown RBP32.12■■■□□ 2.73
APTR-202ENST00000416650 AFF2P51816 1311 aa32.12■■■□□ 2.73
APTR-202ENST00000416650 STK26Q9P289 416 aa32.12■■■□□ 2.73
APTR-202ENST00000416650 MARF1Q9Y4F3 1742 aaKnown RBP32.1■■■□□ 2.73
APTR-202ENST00000416650 KIF1AQ12756 1690 aa32.1■■■□□ 2.73
APTR-202ENST00000416650 RGPD8O14715 1765 aaPredicted RBP32.09■■■□□ 2.73
APTR-202ENST00000416650 TMEM132EQ6IEE7 984 aa32.09■■■□□ 2.73
APTR-202ENST00000416650 PXDNQ92626 1479 aa32.09■■■□□ 2.73
APTR-202ENST00000416650 CDK12Q9NYV4 1490 aaPredicted RBP32.09■■■□□ 2.73
APTR-202ENST00000416650 PLEKHH1Q9ULM0 1364 aa32.08■■■□□ 2.73
APTR-202ENST00000416650 WAPLQ7Z5K2 1190 aa32.07■■■□□ 2.72
APTR-202ENST00000416650 C8orf37Q96NL8 207 aa32.05■■■□□ 2.72
APTR-202ENST00000416650 NPHP3Q7Z494 1330 aa32.04■■■□□ 2.72
APTR-202ENST00000416650 RXRBP28702 533 aa32.03■■■□□ 2.72
APTR-202ENST00000416650 ESCO1Q5FWF5 840 aa32.03■■■□□ 2.72
APTR-202ENST00000416650 C14orf93Q9H972 538 aaKnown RBP32.01■■■□□ 2.71
APTR-202ENST00000416650 ADAMTS2O95450 1211 aa31.98■■■□□ 2.71
APTR-202ENST00000416650 DHX57Q6P158 1386 aaKnown RBP31.97■■■□□ 2.71
APTR-202ENST00000416650 DLC1Q96QB1 1528 aa31.97■■■□□ 2.71
APTR-202ENST00000416650 NUTM2FA1L443 756 aa31.96■■■□□ 2.71
APTR-202ENST00000416650 CFAP70Q5T0N1 1121 aa31.96■■■□□ 2.71
APTR-202ENST00000416650 ADGRB1O14514 1584 aa31.95■■■□□ 2.71
APTR-202ENST00000416650 RGS12O14924 1447 aa31.95■■■□□ 2.71
APTR-202ENST00000416650 SIRT1Q96EB6 747 aa31.95■■■□□ 2.71
APTR-202ENST00000416650 ADGRB2O60241 1585 aa31.94■■■□□ 2.7
APTR-202ENST00000416650 FOXO3O43524 673 aa31.93■■■□□ 2.7
APTR-202ENST00000416650 NGLY1Q96IV0 654 aa31.93■■■□□ 2.7
APTR-202ENST00000416650 XPCQ01831 940 aaPredicted RBP31.91■■■□□ 2.7
APTR-202ENST00000416650 QTRT2Q9H974 415 aaKnown RBP31.91■■■□□ 2.7
APTR-202ENST00000416650 USP32Q8NFA0 1604 aa31.9■■■□□ 2.7
APTR-202ENST00000416650 RBM6P78332 1123 aaKnown RBP31.9■■■□□ 2.7
APTR-202ENST00000416650 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.89■■■□□ 2.7
APTR-202ENST00000416650 UPF1Q92900 1129 aaKnown RBP eCLIP31.88■■■□□ 2.69
APTR-202ENST00000416650 ABCA3Q99758 1704 aa31.86■■■□□ 2.69
APTR-202ENST00000416650 PRAM1Q96QH2 718 aa31.85■■■□□ 2.69
APTR-202ENST00000416650 HRCP23327 699 aa31.84■■■□□ 2.69
APTR-202ENST00000416650 USP21Q9UK80 565 aa31.84■■■□□ 2.69
APTR-202ENST00000416650 ARHGEF28Q8N1W1 1705 aaKnown RBP31.83■■■□□ 2.69
APTR-202ENST00000416650 FNBP4Q8N3X1 1017 aaPredicted RBP31.83■■■□□ 2.69
APTR-202ENST00000416650 ATRNO75882 1429 aa31.83■■■□□ 2.69
APTR-202ENST00000416650 SAFB2Q14151 953 aaKnown RBP eCLIP31.81■■■□□ 2.68
APTR-202ENST00000416650 SPATA31A3Q5VYP0 1347 aa31.8■■■□□ 2.68
APTR-202ENST00000416650 TRPC5Q9UL62 973 aaPredicted RBP31.8■■■□□ 2.68
APTR-202ENST00000416650 ANKARQ7Z5J8 1434 aa31.8■■■□□ 2.68
APTR-202ENST00000416650 TNS3Q68CZ2 1445 aa31.79■■■□□ 2.68
APTR-202ENST00000416650 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
APTR-202ENST00000416650 PHF8Q9UPP1 1060 aa31.78■■■□□ 2.68
APTR-202ENST00000416650 BCL9LQ86UU0 1499 aa31.78■■■□□ 2.68
APTR-202ENST00000416650 POGKQ9P215 609 aa31.77■■■□□ 2.68
APTR-202ENST00000416650 TRPM3Q9HCF6 1732 aaPredicted RBP31.77■■■□□ 2.68
APTR-202ENST00000416650 KRT28Q7Z3Y7 464 aa31.76■■■□□ 2.67
APTR-202ENST00000416650 PLCH1Q4KWH8 1693 aa31.76■■■□□ 2.67
APTR-202ENST00000416650 KDM2AQ9Y2K7 1162 aa31.75■■■□□ 2.67
APTR-202ENST00000416650 ITSN1Q15811 1721 aa31.75■■■□□ 2.67
APTR-202ENST00000416650 STAC3Q96MF2 364 aa31.74■■■□□ 2.67
APTR-202ENST00000416650 KIAA1210Q9ULL0 1709 aa31.74■■■□□ 2.67
APTR-202ENST00000416650 TULP4Q9NRJ4 1543 aa31.74■■■□□ 2.67
APTR-202ENST00000416650 TRAK1Q9UPV9 953 aa31.73■■■□□ 2.67
APTR-202ENST00000416650 NWD2Q9ULI1 1742 aa31.72■■■□□ 2.67
APTR-202ENST00000416650 ALS2Q96Q42 1657 aa31.71■■■□□ 2.67
APTR-202ENST00000416650 SLIT2O94813 1529 aa31.7■■■□□ 2.67
APTR-202ENST00000416650 SBNO1A3KN83 1393 aa31.7■■■□□ 2.67
APTR-202ENST00000416650 EIF3AQ14152 1382 aaKnown RBP31.69■■■□□ 2.66
APTR-202ENST00000416650 PSME1Q06323 249 aa31.69■■■□□ 2.66
APTR-202ENST00000416650 EP400Q96L91 3159 aa31.69■■■□□ 2.66
APTR-202ENST00000416650 GLI3P10071 1580 aa31.68■■■□□ 2.66
APTR-202ENST00000416650 ATAD2Q6PL18 1390 aa31.67■■■□□ 2.66
APTR-202ENST00000416650 HIRIP3Q9BW71 556 aaPredicted RBP31.66■■■□□ 2.66
APTR-202ENST00000416650 MINK1Q8N4C8 1332 aaPredicted RBP31.66■■■□□ 2.66
APTR-202ENST00000416650 ARHGEF10O15013 1369 aa31.66■■■□□ 2.66
APTR-202ENST00000416650 CRYBG1Q9Y4K1 1723 aa31.64■■■□□ 2.66
APTR-202ENST00000416650 BRWD3Q6RI45 1802 aa31.63■■■□□ 2.65
APTR-202ENST00000416650 PMFBP1Q8TBY8 1022 aa31.63■■■□□ 2.65
APTR-202ENST00000416650 PRR36Q9H6K5 1346 aa31.61■■■□□ 2.65
APTR-202ENST00000416650 TOPAZ1Q8N9V7 1692 aa31.6■■■□□ 2.65
APTR-202ENST00000416650 RALGAPBQ86X10 1494 aa31.6■■■□□ 2.65
APTR-202ENST00000416650 HAP1P54257 671 aaPredicted RBP31.6■■■□□ 2.65
APTR-202ENST00000416650 NRAPQ86VF7 1730 aa31.6■■■□□ 2.65
APTR-202ENST00000416650 UNC5CLQ8IV45 518 aa31.59■■■□□ 2.65
APTR-202ENST00000416650 GJD4Q96KN9 370 aaPredicted RBP31.59■■■□□ 2.65
APTR-202ENST00000416650 ATP7BP35670 1465 aa31.59■■■□□ 2.65
APTR-202ENST00000416650 WASLO00401 505 aaPredicted RBP31.58■■■□□ 2.65
APTR-202ENST00000416650 CABLES1Q8TDN4 633 aa31.58■■■□□ 2.65
APTR-202ENST00000416650 LMOD2Q6P5Q4 547 aa31.57■■■□□ 2.64
APTR-202ENST00000416650 GPRASP1Q5JY77 1395 aa31.56■■■□□ 2.64
APTR-202ENST00000416650 COL14A1Q05707 1796 aaKnown RBP31.54■■■□□ 2.64
APTR-202ENST00000416650 PLEKHG5O94827 1062 aa31.53■■■□□ 2.64
APTR-202ENST00000416650 PHRF1Q9P1Y6 1649 aaKnown RBP31.49■■■□□ 2.63
APTR-202ENST00000416650 QRICH2Q9H0J4 1663 aa31.48■■■□□ 2.63
APTR-202ENST00000416650 VPS72Q15906 364 aa31.45■■■□□ 2.63
APTR-202ENST00000416650 NGDNQ8NEJ9 315 aaKnown RBP31.45■■■□□ 2.63
APTR-202ENST00000416650 NUDT16Q96DE0 195 aaKnown RBP31.42■■■□□ 2.62
APTR-202ENST00000416650 FAM83GA6ND36 823 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms