RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 RAB3GAP2Q9H2M9 1393 aa27.18■■□□□ 1.94
SMIM19-202ENST00000416469 STK26Q9P289 416 aa27.16■■□□□ 1.94
SMIM19-202ENST00000416469 ABCC11Q96J66 1382 aa27.15■■□□□ 1.94
SMIM19-202ENST00000416469 SOS2Q07890 1332 aaPredicted RBP27.15■■□□□ 1.94
SMIM19-202ENST00000416469 TMEM132EQ6IEE7 984 aa27.14■■□□□ 1.94
SMIM19-202ENST00000416469 MYOM2P54296 1465 aa27.13■■□□□ 1.93
SMIM19-202ENST00000416469 NRXN1Q9ULB1 1477 aa27.13■■□□□ 1.93
SMIM19-202ENST00000416469 WAPLQ7Z5K2 1190 aa27.12■■□□□ 1.93
SMIM19-202ENST00000416469 YTHDC2Q9H6S0 1430 aaKnown RBP27.12■■□□□ 1.93
SMIM19-202ENST00000416469 AFF2P51816 1311 aa27.12■■□□□ 1.93
SMIM19-202ENST00000416469 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
SMIM19-202ENST00000416469 COL22A1Q8NFW1 1626 aaPredicted RBP27.08■■□□□ 1.93
SMIM19-202ENST00000416469 FMN2Q9NZ56 1722 aa27.08■■□□□ 1.93
SMIM19-202ENST00000416469 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.93
SMIM19-202ENST00000416469 C14orf93Q9H972 538 aaKnown RBP27.08■■□□□ 1.93
SMIM19-202ENST00000416469 C8orf37Q96NL8 207 aa27.07■■□□□ 1.92
SMIM19-202ENST00000416469 RXRBP28702 533 aa27.06■■□□□ 1.92
SMIM19-202ENST00000416469 NPHP3Q7Z494 1330 aa27.06■■□□□ 1.92
SMIM19-202ENST00000416469 PXDNQ92626 1479 aa27.05■■□□□ 1.92
SMIM19-202ENST00000416469 CDK12Q9NYV4 1490 aaPredicted RBP27.05■■□□□ 1.92
SMIM19-202ENST00000416469 CFAP70Q5T0N1 1121 aa27.03■■□□□ 1.92
SMIM19-202ENST00000416469 SIRT1Q96EB6 747 aa27.03■■□□□ 1.92
SMIM19-202ENST00000416469 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
SMIM19-202ENST00000416469 KIF1AQ12756 1690 aa27.01■■□□□ 1.92
SMIM19-202ENST00000416469 NUTM2FA1L443 756 aa27.01■■□□□ 1.91
SMIM19-202ENST00000416469 ADAMTS2O95450 1211 aa27.01■■□□□ 1.91
SMIM19-202ENST00000416469 RGPD8O14715 1765 aaPredicted RBP26.99■■□□□ 1.91
SMIM19-202ENST00000416469 FOXO3O43524 673 aa26.99■■□□□ 1.91
SMIM19-202ENST00000416469 NGLY1Q96IV0 654 aa26.98■■□□□ 1.91
SMIM19-202ENST00000416469 MARF1Q9Y4F3 1742 aaKnown RBP26.98■■□□□ 1.91
SMIM19-202ENST00000416469 QTRT2Q9H974 415 aaKnown RBP26.97■■□□□ 1.91
SMIM19-202ENST00000416469 HRCP23327 699 aa26.96■■□□□ 1.91
SMIM19-202ENST00000416469 XPCQ01831 940 aaPredicted RBP26.96■■□□□ 1.91
SMIM19-202ENST00000416469 DLC1Q96QB1 1528 aa26.95■■□□□ 1.91
SMIM19-202ENST00000416469 ADGRB1O14514 1584 aa26.94■■□□□ 1.9
SMIM19-202ENST00000416469 RBM6P78332 1123 aaKnown RBP26.94■■□□□ 1.9
SMIM19-202ENST00000416469 RGS12O14924 1447 aa26.92■■□□□ 1.9
SMIM19-202ENST00000416469 UPF1Q92900 1129 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMIM19-202ENST00000416469 PRAM1Q96QH2 718 aa26.92■■□□□ 1.9
SMIM19-202ENST00000416469 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SMIM19-202ENST00000416469 ADGRB2O60241 1585 aa26.89■■□□□ 1.9
SMIM19-202ENST00000416469 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.9
SMIM19-202ENST00000416469 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.9
SMIM19-202ENST00000416469 DCAF11Q8TEB1 546 aa26.88■■□□□ 1.89
SMIM19-202ENST00000416469 POGKQ9P215 609 aa26.87■■□□□ 1.89
SMIM19-202ENST00000416469 KDM2AQ9Y2K7 1162 aa26.87■■□□□ 1.89
SMIM19-202ENST00000416469 STAC3Q96MF2 364 aa26.86■■□□□ 1.89
SMIM19-202ENST00000416469 PHF8Q9UPP1 1060 aa26.86■■□□□ 1.89
SMIM19-202ENST00000416469 USP32Q8NFA0 1604 aa26.86■■□□□ 1.89
SMIM19-202ENST00000416469 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
SMIM19-202ENST00000416469 KRT28Q7Z3Y7 464 aa26.85■■□□□ 1.89
SMIM19-202ENST00000416469 TRPC5Q9UL62 973 aaPredicted RBP26.85■■□□□ 1.89
SMIM19-202ENST00000416469 ATRNO75882 1429 aa26.84■■□□□ 1.89
SMIM19-202ENST00000416469 ANKARQ7Z5J8 1434 aa26.83■■□□□ 1.89
SMIM19-202ENST00000416469 TRAK1Q9UPV9 953 aa26.83■■□□□ 1.89
SMIM19-202ENST00000416469 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
SMIM19-202ENST00000416469 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.81■■□□□ 1.88
SMIM19-202ENST00000416469 TNS3Q68CZ2 1445 aa26.81■■□□□ 1.88
SMIM19-202ENST00000416469 PSME1Q06323 249 aa26.79■■□□□ 1.88
SMIM19-202ENST00000416469 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
SMIM19-202ENST00000416469 ABCA3Q99758 1704 aa26.77■■□□□ 1.88
SMIM19-202ENST00000416469 SBNO1A3KN83 1393 aa26.77■■□□□ 1.88
SMIM19-202ENST00000416469 HIRIP3Q9BW71 556 aaPredicted RBP26.77■■□□□ 1.88
SMIM19-202ENST00000416469 MINK1Q8N4C8 1332 aaPredicted RBP26.76■■□□□ 1.87
SMIM19-202ENST00000416469 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
SMIM19-202ENST00000416469 EIF3AQ14152 1382 aaKnown RBP26.75■■□□□ 1.87
SMIM19-202ENST00000416469 SLIT2O94813 1529 aa26.75■■□□□ 1.87
SMIM19-202ENST00000416469 TRPM3Q9HCF6 1732 aaPredicted RBP26.73■■□□□ 1.87
SMIM19-202ENST00000416469 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
SMIM19-202ENST00000416469 KIAA1210Q9ULL0 1709 aa26.73■■□□□ 1.87
SMIM19-202ENST00000416469 ARHGEF10O15013 1369 aa26.72■■□□□ 1.87
SMIM19-202ENST00000416469 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
SMIM19-202ENST00000416469 PRR36Q9H6K5 1346 aa26.7■■□□□ 1.87
SMIM19-202ENST00000416469 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.87
SMIM19-202ENST00000416469 WASLO00401 505 aaPredicted RBP26.7■■□□□ 1.86
SMIM19-202ENST00000416469 HAP1P54257 671 aaPredicted RBP26.7■■□□□ 1.86
SMIM19-202ENST00000416469 ITSN1Q15811 1721 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 LMOD2Q6P5Q4 547 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 UNC5CLQ8IV45 518 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 CABLES1Q8TDN4 633 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 GJD4Q96KN9 370 aaPredicted RBP26.69■■□□□ 1.86
SMIM19-202ENST00000416469 NWD2Q9ULI1 1742 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 ALS2Q96Q42 1657 aa26.69■■□□□ 1.86
SMIM19-202ENST00000416469 GLI3P10071 1580 aa26.67■■□□□ 1.86
SMIM19-202ENST00000416469 GPRASP1Q5JY77 1395 aa26.66■■□□□ 1.86
SMIM19-202ENST00000416469 PLEKHG5O94827 1062 aa26.65■■□□□ 1.86
SMIM19-202ENST00000416469 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
SMIM19-202ENST00000416469 ATP7BP35670 1465 aa26.62■■□□□ 1.85
SMIM19-202ENST00000416469 CRYBG1Q9Y4K1 1723 aa26.6■■□□□ 1.85
SMIM19-202ENST00000416469 BRWD3Q6RI45 1802 aa26.6■■□□□ 1.85
SMIM19-202ENST00000416469 NGDNQ8NEJ9 315 aaKnown RBP26.59■■□□□ 1.85
SMIM19-202ENST00000416469 TOPAZ1Q8N9V7 1692 aa26.59■■□□□ 1.85
SMIM19-202ENST00000416469 NRAPQ86VF7 1730 aa26.57■■□□□ 1.84
SMIM19-202ENST00000416469 VPS72Q15906 364 aa26.57■■□□□ 1.84
SMIM19-202ENST00000416469 NUDT16Q96DE0 195 aaKnown RBP26.57■■□□□ 1.84
SMIM19-202ENST00000416469 FAM83GA6ND36 823 aa26.56■■□□□ 1.84
SMIM19-202ENST00000416469 COL14A1Q05707 1796 aaKnown RBP26.56■■□□□ 1.84
SMIM19-202ENST00000416469 NBPF1Q3BBV0 1214 aa26.55■■□□□ 1.84
SMIM19-202ENST00000416469 CDK19Q9BWU1 502 aa26.55■■□□□ 1.84
SMIM19-202ENST00000416469 EP400Q96L91 3159 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms