RNA–Protein interactions for RNA: ENST00000415938.7

PKD1-202, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 3,386 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-202ENST00000415938 SMC4Q9NTJ3 1288 aa17.06■□□□□ 0.32
PKD1-202ENST00000415938 INSRP06213 1382 aa17.06■□□□□ 0.32
PKD1-202ENST00000415938 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
PKD1-202ENST00000415938 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
PKD1-202ENST00000415938 TRIM44Q96DX7 344 aaPredicted RBP17.05■□□□□ 0.32
PKD1-202ENST00000415938 ANTXR1Q9H6X2 564 aa17.05■□□□□ 0.32
PKD1-202ENST00000415938 MTHFSP49914 203 aa17.04■□□□□ 0.32
PKD1-202ENST00000415938 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
PKD1-202ENST00000415938 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
PKD1-202ENST00000415938 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
PKD1-202ENST00000415938 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 FANCAO15360 1455 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
PKD1-202ENST00000415938 CHMP5Q9NZZ3 219 aa17.03■□□□□ 0.32
PKD1-202ENST00000415938 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
PKD1-202ENST00000415938 CFAP53Q96M91 514 aa17.02■□□□□ 0.31
PKD1-202ENST00000415938 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
PKD1-202ENST00000415938 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
PKD1-202ENST00000415938 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
PKD1-202ENST00000415938 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
PKD1-202ENST00000415938 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
PKD1-202ENST00000415938 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
PKD1-202ENST00000415938 GLIPR1L2Q4G1C9 344 aa17■□□□□ 0.31
PKD1-202ENST00000415938 ASXL2Q76L83 1435 aa17■□□□□ 0.31
PKD1-202ENST00000415938 ADGRL1O94910 1474 aa17■□□□□ 0.31
PKD1-202ENST00000415938 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
PKD1-202ENST00000415938 UNC13BO14795 1591 aa16.99■□□□□ 0.31
PKD1-202ENST00000415938 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
PKD1-202ENST00000415938 ABCC1P33527 1531 aa16.99■□□□□ 0.31
PKD1-202ENST00000415938 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
PKD1-202ENST00000415938 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
PKD1-202ENST00000415938 NUTM2FA1L443 756 aa16.98■□□□□ 0.31
PKD1-202ENST00000415938 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
PKD1-202ENST00000415938 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
PKD1-202ENST00000415938 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
PKD1-202ENST00000415938 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
PKD1-202ENST00000415938 GRPEL1Q9HAV7 217 aa16.96■□□□□ 0.31
PKD1-202ENST00000415938 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
PKD1-202ENST00000415938 UHRF1BP1LA0JNW5 1464 aa16.95■□□□□ 0.3
PKD1-202ENST00000415938 MRE11P49959 708 aa16.94■□□□□ 0.3
PKD1-202ENST00000415938 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
PKD1-202ENST00000415938 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
PKD1-202ENST00000415938 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
PKD1-202ENST00000415938 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
PKD1-202ENST00000415938 ATP10AO60312 1499 aa16.93■□□□□ 0.3
PKD1-202ENST00000415938 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 TRIM27P14373 513 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 C1orf115Q9H7X2 142 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 ARID3AQ99856 593 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
PKD1-202ENST00000415938 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
PKD1-202ENST00000415938 ESPNB1AK53 854 aa16.91■□□□□ 0.3
PKD1-202ENST00000415938 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
PKD1-202ENST00000415938 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
PKD1-202ENST00000415938 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 FBLN1P23142 703 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 TNPO1Q92973 898 aaKnown RBP16.9■□□□□ 0.3
PKD1-202ENST00000415938 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
PKD1-202ENST00000415938 CLCN1P35523 988 aa16.89■□□□□ 0.3
PKD1-202ENST00000415938 WDR63Q8IWG1 891 aa16.89■□□□□ 0.3
PKD1-202ENST00000415938 SYNMO15061 1565 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 SOX12O15370 315 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 ZFYVE16Q7Z3T8 1539 aa16.89■□□□□ 0.29
PKD1-202ENST00000415938 ANP32BQ92688 251 aaKnown RBP16.88■□□□□ 0.29
PKD1-202ENST00000415938 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
PKD1-202ENST00000415938 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
PKD1-202ENST00000415938 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
PKD1-202ENST00000415938 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
PKD1-202ENST00000415938 APBB1O00213 710 aa16.86■□□□□ 0.29
PKD1-202ENST00000415938 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
PKD1-202ENST00000415938 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
PKD1-202ENST00000415938 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
PKD1-202ENST00000415938 GAS2L3Q86XJ1 694 aa16.86■□□□□ 0.29
PKD1-202ENST00000415938 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
PKD1-202ENST00000415938 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
PKD1-202ENST00000415938 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
PKD1-202ENST00000415938 LAMC1P11047 1609 aa16.85■□□□□ 0.29
PKD1-202ENST00000415938 RIPK4P57078 832 aa16.85■□□□□ 0.29
PKD1-202ENST00000415938 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
PKD1-202ENST00000415938 TRPM2O94759 1503 aa16.84■□□□□ 0.29
PKD1-202ENST00000415938 MADDQ8WXG6 1647 aa16.84■□□□□ 0.29
PKD1-202ENST00000415938 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.29
PKD1-202ENST00000415938 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.29
PKD1-202ENST00000415938 AAMPQ13685 434 aa16.83■□□□□ 0.29
PKD1-202ENST00000415938 PTPRTO14522 1441 aa16.83■□□□□ 0.28
PKD1-202ENST00000415938 NOS1P29475 1434 aa16.83■□□□□ 0.28
PKD1-202ENST00000415938 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms