RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 ESCO1Q5FWF5 840 aa24.81■■□□□ 1.56
CDC42EP1-202ENST00000415670 KIF1BO60333 1816 aa24.81■■□□□ 1.56
CDC42EP1-202ENST00000415670 PTCH1Q13635 1447 aa24.8■■□□□ 1.56
CDC42EP1-202ENST00000415670 FOXO3O43524 673 aa24.8■■□□□ 1.56
CDC42EP1-202ENST00000415670 COL22A1Q8NFW1 1626 aaPredicted RBP24.79■■□□□ 1.56
CDC42EP1-202ENST00000415670 MYOM2P54296 1465 aa24.79■■□□□ 1.56
CDC42EP1-202ENST00000415670 WAPLQ7Z5K2 1190 aa24.76■■□□□ 1.55
CDC42EP1-202ENST00000415670 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
CDC42EP1-202ENST00000415670 PXDNQ92626 1479 aa24.76■■□□□ 1.55
CDC42EP1-202ENST00000415670 VGFO15240 615 aaPredicted RBP24.75■■□□□ 1.55
CDC42EP1-202ENST00000415670 DEFB132Q7Z7B7 95 aa24.74■■□□□ 1.55
CDC42EP1-202ENST00000415670 PCGF6Q9BYE7 350 aa24.74■■□□□ 1.55
CDC42EP1-202ENST00000415670 STK26Q9P289 416 aa24.74■■□□□ 1.55
CDC42EP1-202ENST00000415670 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
CDC42EP1-202ENST00000415670 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
CDC42EP1-202ENST00000415670 FOXD1Q16676 465 aa24.72■■□□□ 1.55
CDC42EP1-202ENST00000415670 BRWD3Q6RI45 1802 aa24.7■■□□□ 1.54
CDC42EP1-202ENST00000415670 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
CDC42EP1-202ENST00000415670 ADGRF5Q8IZF2 1346 aa24.69■■□□□ 1.54
CDC42EP1-202ENST00000415670 GLI3P10071 1580 aa24.69■■□□□ 1.54
CDC42EP1-202ENST00000415670 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
CDC42EP1-202ENST00000415670 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
CDC42EP1-202ENST00000415670 PPLO60437 1756 aa24.68■■□□□ 1.54
CDC42EP1-202ENST00000415670 NAIPQ13075 1403 aa24.68■■□□□ 1.54
CDC42EP1-202ENST00000415670 RALGAPBQ86X10 1494 aa24.67■■□□□ 1.54
CDC42EP1-202ENST00000415670 TMEM132EQ6IEE7 984 aa24.67■■□□□ 1.54
CDC42EP1-202ENST00000415670 CCDC125Q86Z20 511 aa24.66■■□□□ 1.54
CDC42EP1-202ENST00000415670 CABLES1Q8TDN4 633 aa24.66■■□□□ 1.54
CDC42EP1-202ENST00000415670 PRAG1Q86YV5 1406 aa24.66■■□□□ 1.54
CDC42EP1-202ENST00000415670 UNC5CLQ8IV45 518 aa24.65■■□□□ 1.54
CDC42EP1-202ENST00000415670 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
CDC42EP1-202ENST00000415670 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
CDC42EP1-202ENST00000415670 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
CDC42EP1-202ENST00000415670 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
CDC42EP1-202ENST00000415670 SLIT2O94813 1529 aa24.61■■□□□ 1.53
CDC42EP1-202ENST00000415670 SEPT12Q8IYM1 358 aa24.61■■□□□ 1.53
CDC42EP1-202ENST00000415670 KRT28Q7Z3Y7 464 aa24.6■■□□□ 1.53
CDC42EP1-202ENST00000415670 SLC4A1APQ9BWU0 796 aaKnown RBP24.6■■□□□ 1.53
CDC42EP1-202ENST00000415670 BLMP54132 1417 aaPredicted RBP24.59■■□□□ 1.53
CDC42EP1-202ENST00000415670 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.58■■□□□ 1.53
CDC42EP1-202ENST00000415670 RGPD8O14715 1765 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP1-202ENST00000415670 PSDA5PKW4 1024 aaPredicted RBP24.57■■□□□ 1.52
CDC42EP1-202ENST00000415670 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
CDC42EP1-202ENST00000415670 FMN2Q9NZ56 1722 aa24.52■■□□□ 1.52
CDC42EP1-202ENST00000415670 CCDC9Q9Y3X0 531 aaKnown RBP24.52■■□□□ 1.52
CDC42EP1-202ENST00000415670 USP32Q8NFA0 1604 aa24.52■■□□□ 1.52
CDC42EP1-202ENST00000415670 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
CDC42EP1-202ENST00000415670 FAM83GA6ND36 823 aa24.51■■□□□ 1.51
CDC42EP1-202ENST00000415670 FAM182BQ5T319 152 aa24.51■■□□□ 1.51
CDC42EP1-202ENST00000415670 VPS72Q15906 364 aa24.5■■□□□ 1.51
CDC42EP1-202ENST00000415670 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
CDC42EP1-202ENST00000415670 TECPR2O15040 1411 aa24.5■■□□□ 1.51
CDC42EP1-202ENST00000415670 LMOD2Q6P5Q4 547 aa24.49■■□□□ 1.51
CDC42EP1-202ENST00000415670 ONECUT3O60422 494 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP1-202ENST00000415670 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP1-202ENST00000415670 SAFB2Q14151 953 aaKnown RBP eCLIP24.48■■□□□ 1.51
CDC42EP1-202ENST00000415670 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
CDC42EP1-202ENST00000415670 PLCH1Q4KWH8 1693 aa24.47■■□□□ 1.51
CDC42EP1-202ENST00000415670 HRCP23327 699 aa24.47■■□□□ 1.51
CDC42EP1-202ENST00000415670 SF3B2Q13435 895 aaKnown RBP24.47■■□□□ 1.51
CDC42EP1-202ENST00000415670 PHF8Q9UPP1 1060 aa24.47■■□□□ 1.51
CDC42EP1-202ENST00000415670 SPATA31E1Q6ZUB1 1445 aa24.46■■□□□ 1.51
CDC42EP1-202ENST00000415670 IFT172Q9UG01 1749 aa24.45■■□□□ 1.5
CDC42EP1-202ENST00000415670 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
CDC42EP1-202ENST00000415670 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
CDC42EP1-202ENST00000415670 PMFBP1Q8TBY8 1022 aa24.44■■□□□ 1.5
CDC42EP1-202ENST00000415670 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
CDC42EP1-202ENST00000415670 FAM98CQ17RN3 349 aaKnown RBP24.43■■□□□ 1.5
CDC42EP1-202ENST00000415670 KNDC1Q76NI1 1749 aa24.43■■□□□ 1.5
CDC42EP1-202ENST00000415670 KIF1AQ12756 1690 aa24.43■■□□□ 1.5
CDC42EP1-202ENST00000415670 ACIN1Q9UKV3 1341 aaKnown RBP24.42■■□□□ 1.5
CDC42EP1-202ENST00000415670 ABCA3Q99758 1704 aa24.42■■□□□ 1.5
CDC42EP1-202ENST00000415670 EN1Q05925 392 aaPredicted RBP24.42■■□□□ 1.5
CDC42EP1-202ENST00000415670 A0A0G2JS52 829 aa24.41■■□□□ 1.5
CDC42EP1-202ENST00000415670 MYT1Q01538 1121 aa24.41■■□□□ 1.5
CDC42EP1-202ENST00000415670 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
CDC42EP1-202ENST00000415670 LRP5O75197 1615 aa24.4■■□□□ 1.5
CDC42EP1-202ENST00000415670 PSME1Q06323 249 aa24.4■■□□□ 1.5
CDC42EP1-202ENST00000415670 PIK3C2GO75747 1445 aa24.4■■□□□ 1.5
CDC42EP1-202ENST00000415670 NWD2Q9ULI1 1742 aa24.38■■□□□ 1.49
CDC42EP1-202ENST00000415670 PRAM1Q96QH2 718 aa24.37■■□□□ 1.49
CDC42EP1-202ENST00000415670 MPHOSPH9Q99550 1183 aa24.37■■□□□ 1.49
CDC42EP1-202ENST00000415670 BTG4Q9NY30 223 aa24.37■■□□□ 1.49
CDC42EP1-202ENST00000415670 ANKRD30BQ9BXX2 1392 aa24.37■■□□□ 1.49
CDC42EP1-202ENST00000415670 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
CDC42EP1-202ENST00000415670 NRXN1Q9ULB1 1477 aa24.36■■□□□ 1.49
CDC42EP1-202ENST00000415670 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
CDC42EP1-202ENST00000415670 R3HDM1Q15032 1099 aaKnown RBP24.35■■□□□ 1.49
CDC42EP1-202ENST00000415670 NRAPQ86VF7 1730 aa24.35■■□□□ 1.49
CDC42EP1-202ENST00000415670 BAG6P46379 1132 aa24.34■■□□□ 1.49
CDC42EP1-202ENST00000415670 SIRT1Q96EB6 747 aa24.33■■□□□ 1.49
CDC42EP1-202ENST00000415670 HIRIP3Q9BW71 556 aaPredicted RBP24.33■■□□□ 1.49
CDC42EP1-202ENST00000415670 EZH2Q15910 746 aaKnown RBP24.3■■□□□ 1.48
CDC42EP1-202ENST00000415670 TRPM3Q9HCF6 1732 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP1-202ENST00000415670 PRR36Q9H6K5 1346 aa24.29■■□□□ 1.48
CDC42EP1-202ENST00000415670 ARHGEF10O15013 1369 aa24.29■■□□□ 1.48
CDC42EP1-202ENST00000415670 DHX57Q6P158 1386 aaKnown RBP24.27■■□□□ 1.48
CDC42EP1-202ENST00000415670 SPATA31A5Q5VU36 1347 aa24.26■■□□□ 1.47
CDC42EP1-202ENST00000415670 SPATA31A7Q8IWB4 1347 aa24.26■■□□□ 1.47
CDC42EP1-202ENST00000415670 POGKQ9P215 609 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms