RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TMEM132EQ6IEE7 984 aa29.97■■■□□ 2.39
PTPRU-203ENST00000415600 LRP6O75581 1613 aa29.97■■■□□ 2.39
PTPRU-203ENST00000415600 CDC42BPGQ6DT37 1551 aa29.96■■■□□ 2.39
PTPRU-203ENST00000415600 C14orf93Q9H972 538 aaKnown RBP29.96■■■□□ 2.39
PTPRU-203ENST00000415600 ORAI2Q96SN7 254 aa29.94■■■□□ 2.38
PTPRU-203ENST00000415600 DHX57Q6P158 1386 aaKnown RBP29.94■■■□□ 2.38
PTPRU-203ENST00000415600 YTHDC2Q9H6S0 1430 aaKnown RBP29.94■■■□□ 2.38
PTPRU-203ENST00000415600 DDX17Q92841 729 aaKnown RBP29.93■■■□□ 2.38
PTPRU-203ENST00000415600 SIRT1Q96EB6 747 aa29.93■■■□□ 2.38
PTPRU-203ENST00000415600 LAMC1P11047 1609 aa29.92■■■□□ 2.38
PTPRU-203ENST00000415600 NRXN1Q9ULB1 1477 aa29.92■■■□□ 2.38
PTPRU-203ENST00000415600 ESCO1Q5FWF5 840 aa29.92■■■□□ 2.38
PTPRU-203ENST00000415600 WAPLQ7Z5K2 1190 aa29.92■■■□□ 2.38
PTPRU-203ENST00000415600 KNDC1Q76NI1 1749 aa29.92■■■□□ 2.38
PTPRU-203ENST00000415600 STAC3Q96MF2 364 aa29.91■■■□□ 2.38
PTPRU-203ENST00000415600 PNPLA6Q8IY17 1366 aa29.91■■■□□ 2.38
PTPRU-203ENST00000415600 NPHP3Q7Z494 1330 aa29.9■■■□□ 2.38
PTPRU-203ENST00000415600 SOS2Q07890 1332 aaPredicted RBP29.9■■■□□ 2.38
PTPRU-203ENST00000415600 CFAP70Q5T0N1 1121 aa29.87■■■□□ 2.37
PTPRU-203ENST00000415600 PLEKHH1Q9ULM0 1364 aa29.82■■■□□ 2.36
PTPRU-203ENST00000415600 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
PTPRU-203ENST00000415600 C8orf37Q96NL8 207 aa29.81■■■□□ 2.36
PTPRU-203ENST00000415600 AFF2P51816 1311 aa29.81■■■□□ 2.36
PTPRU-203ENST00000415600 RXRBP28702 533 aa29.81■■■□□ 2.36
PTPRU-203ENST00000415600 POGKQ9P215 609 aa29.81■■■□□ 2.36
PTPRU-203ENST00000415600 NUTM2FA1L443 756 aa29.79■■■□□ 2.36
PTPRU-203ENST00000415600 KDM2AQ9Y2K7 1162 aa29.79■■■□□ 2.36
PTPRU-203ENST00000415600 FOXO3O43524 673 aa29.78■■■□□ 2.36
PTPRU-203ENST00000415600 PRAM1Q96QH2 718 aa29.77■■■□□ 2.36
PTPRU-203ENST00000415600 NGLY1Q96IV0 654 aa29.77■■■□□ 2.36
PTPRU-203ENST00000415600 ADAMTS2O95450 1211 aa29.76■■■□□ 2.35
PTPRU-203ENST00000415600 DLC1Q96QB1 1528 aa29.75■■■□□ 2.35
PTPRU-203ENST00000415600 FMN2Q9NZ56 1722 aa29.74■■■□□ 2.35
PTPRU-203ENST00000415600 KIF1AQ12756 1690 aa29.72■■■□□ 2.35
PTPRU-203ENST00000415600 SAFB2Q14151 953 aaKnown RBP eCLIP29.72■■■□□ 2.35
PTPRU-203ENST00000415600 PXDNQ92626 1479 aa29.71■■■□□ 2.35
PTPRU-203ENST00000415600 CDK12Q9NYV4 1490 aaPredicted RBP29.7■■■□□ 2.34
PTPRU-203ENST00000415600 XPCQ01831 940 aaPredicted RBP29.69■■■□□ 2.34
PTPRU-203ENST00000415600 QTRT2Q9H974 415 aaKnown RBP29.69■■■□□ 2.34
PTPRU-203ENST00000415600 PSME1Q06323 249 aa29.69■■■□□ 2.34
PTPRU-203ENST00000415600 TRAK1Q9UPV9 953 aa29.69■■■□□ 2.34
PTPRU-203ENST00000415600 COL22A1Q8NFW1 1626 aaPredicted RBP29.68■■■□□ 2.34
PTPRU-203ENST00000415600 EIF3AQ14152 1382 aaKnown RBP29.68■■■□□ 2.34
PTPRU-203ENST00000415600 ADGRB1O14514 1584 aa29.68■■■□□ 2.34
PTPRU-203ENST00000415600 PHF8Q9UPP1 1060 aa29.68■■■□□ 2.34
PTPRU-203ENST00000415600 RBM6P78332 1123 aaKnown RBP29.67■■■□□ 2.34
PTPRU-203ENST00000415600 ANKARQ7Z5J8 1434 aa29.65■■■□□ 2.34
PTPRU-203ENST00000415600 KRT28Q7Z3Y7 464 aa29.64■■■□□ 2.34
PTPRU-203ENST00000415600 USP21Q9UK80 565 aa29.64■■■□□ 2.34
PTPRU-203ENST00000415600 TRPC5Q9UL62 973 aaPredicted RBP29.62■■■□□ 2.33
PTPRU-203ENST00000415600 SPATA31A3Q5VYP0 1347 aa29.62■■■□□ 2.33
PTPRU-203ENST00000415600 FNBP4Q8N3X1 1017 aaPredicted RBP29.61■■■□□ 2.33
PTPRU-203ENST00000415600 ADGRB2O60241 1585 aa29.6■■■□□ 2.33
PTPRU-203ENST00000415600 MINK1Q8N4C8 1332 aaPredicted RBP29.58■■■□□ 2.33
PTPRU-203ENST00000415600 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
PTPRU-203ENST00000415600 HIRIP3Q9BW71 556 aaPredicted RBP29.56■■■□□ 2.32
PTPRU-203ENST00000415600 SBNO1A3KN83 1393 aa29.55■■■□□ 2.32
PTPRU-203ENST00000415600 TNS3Q68CZ2 1445 aa29.55■■■□□ 2.32
PTPRU-203ENST00000415600 ARHGEF10O15013 1369 aa29.55■■■□□ 2.32
PTPRU-203ENST00000415600 WASLO00401 505 aaPredicted RBP29.54■■■□□ 2.32
PTPRU-203ENST00000415600 GPRASP1Q5JY77 1395 aa29.53■■■□□ 2.32
PTPRU-203ENST00000415600 LMOD2Q6P5Q4 547 aa29.52■■■□□ 2.32
PTPRU-203ENST00000415600 RGPD8O14715 1765 aaPredicted RBP29.52■■■□□ 2.32
PTPRU-203ENST00000415600 PMFBP1Q8TBY8 1022 aa29.52■■■□□ 2.32
PTPRU-203ENST00000415600 TULP4Q9NRJ4 1543 aa29.5■■■□□ 2.31
PTPRU-203ENST00000415600 UPF1Q92900 1129 aaKnown RBP eCLIP29.5■■■□□ 2.31
PTPRU-203ENST00000415600 RGS12O14924 1447 aa29.49■■■□□ 2.31
PTPRU-203ENST00000415600 MARF1Q9Y4F3 1742 aaKnown RBP29.48■■■□□ 2.31
PTPRU-203ENST00000415600 ATRNO75882 1429 aa29.48■■■□□ 2.31
PTPRU-203ENST00000415600 KIAA1210Q9ULL0 1709 aa29.47■■■□□ 2.31
PTPRU-203ENST00000415600 NGDNQ8NEJ9 315 aaKnown RBP29.46■■■□□ 2.31
PTPRU-203ENST00000415600 USP32Q8NFA0 1604 aa29.45■■■□□ 2.31
PTPRU-203ENST00000415600 ARHGEF28Q8N1W1 1705 aaKnown RBP29.44■■■□□ 2.3
PTPRU-203ENST00000415600 UNC5CLQ8IV45 518 aa29.43■■■□□ 2.3
PTPRU-203ENST00000415600 BCL9LQ86UU0 1499 aa29.43■■■□□ 2.3
PTPRU-203ENST00000415600 PRR36Q9H6K5 1346 aa29.41■■■□□ 2.3
PTPRU-203ENST00000415600 ATAD2Q6PL18 1390 aa29.41■■■□□ 2.3
PTPRU-203ENST00000415600 GJD4Q96KN9 370 aaPredicted RBP29.4■■■□□ 2.3
PTPRU-203ENST00000415600 NUDT16Q96DE0 195 aaKnown RBP29.39■■■□□ 2.3
PTPRU-203ENST00000415600 PLEKHG5O94827 1062 aa29.39■■■□□ 2.29
PTPRU-203ENST00000415600 CABLES1Q8TDN4 633 aa29.39■■■□□ 2.29
PTPRU-203ENST00000415600 SLIT2O94813 1529 aa29.38■■■□□ 2.29
PTPRU-203ENST00000415600 ITSN1Q15811 1721 aa29.37■■■□□ 2.29
PTPRU-203ENST00000415600 CDK19Q9BWU1 502 aa29.37■■■□□ 2.29
PTPRU-203ENST00000415600 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.36■■■□□ 2.29
PTPRU-203ENST00000415600 PAK3O75914 559 aaPredicted RBP29.35■■■□□ 2.29
PTPRU-203ENST00000415600 NBPF1Q3BBV0 1214 aa29.35■■■□□ 2.29
PTPRU-203ENST00000415600 L3MBTL2Q969R5 705 aa29.35■■■□□ 2.29
PTPRU-203ENST00000415600 ATP7BP35670 1465 aa29.34■■■□□ 2.29
PTPRU-203ENST00000415600 CCDC61Q9Y6R9 512 aa29.34■■■□□ 2.29
PTPRU-203ENST00000415600 CENPJQ9HC77 1338 aaPredicted RBP29.33■■■□□ 2.29
PTPRU-203ENST00000415600 TRPM3Q9HCF6 1732 aaPredicted RBP29.31■■■□□ 2.28
PTPRU-203ENST00000415600 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
PTPRU-203ENST00000415600 VPS72Q15906 364 aa29.3■■■□□ 2.28
PTPRU-203ENST00000415600 CCDC9Q9Y3X0 531 aaKnown RBP29.3■■■□□ 2.28
PTPRU-203ENST00000415600 RALGAPBQ86X10 1494 aa29.28■■■□□ 2.28
PTPRU-203ENST00000415600 SRPK2P78362 688 aaKnown RBP29.28■■■□□ 2.28
PTPRU-203ENST00000415600 SIN3AQ96ST3 1273 aa29.27■■■□□ 2.28
PTPRU-203ENST00000415600 ABCA3Q99758 1704 aa29.27■■■□□ 2.28
PTPRU-203ENST00000415600 NWD2Q9ULI1 1742 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms