RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 NRXN1Q9ULB1 1477 aa36.63■■■■□ 3.45
HLA-C-204ENST00000415537 LRP6O75581 1613 aa36.63■■■■□ 3.45
HLA-C-204ENST00000415537 POTEAQ6S8J7 498 aa36.62■■■■□ 3.45
HLA-C-204ENST00000415537 ORAI2Q96SN7 254 aa36.62■■■■□ 3.45
HLA-C-204ENST00000415537 CDC42BPGQ6DT37 1551 aa36.61■■■■□ 3.45
HLA-C-204ENST00000415537 CFAP70Q5T0N1 1121 aa36.61■■■■□ 3.45
HLA-C-204ENST00000415537 NUTM2BA6NNL0 878 aaPredicted RBP36.6■■■■□ 3.45
HLA-C-204ENST00000415537 NUTM2EB1AL46 878 aaPredicted RBP36.6■■■■□ 3.45
HLA-C-204ENST00000415537 NUTM2AQ8IVF1 878 aaPredicted RBP36.6■■■■□ 3.45
HLA-C-204ENST00000415537 DHX57Q6P158 1386 aaKnown RBP36.6■■■■□ 3.45
HLA-C-204ENST00000415537 PLEKHH1Q9ULM0 1364 aa36.55■■■■□ 3.44
HLA-C-204ENST00000415537 ESCO1Q5FWF5 840 aa36.55■■■■□ 3.44
HLA-C-204ENST00000415537 SIRT1Q96EB6 747 aa36.54■■■■□ 3.44
HLA-C-204ENST00000415537 KDM2AQ9Y2K7 1162 aa36.54■■■■□ 3.44
HLA-C-204ENST00000415537 DCAF11Q8TEB1 546 aa36.53■■■■□ 3.44
HLA-C-204ENST00000415537 ZNF772Q68DY9 489 aaPredicted RBP36.5■■■■□ 3.43
HLA-C-204ENST00000415537 SOS2Q07890 1332 aaPredicted RBP36.5■■■■□ 3.43
HLA-C-204ENST00000415537 PNPLA6Q8IY17 1366 aa36.5■■■■□ 3.43
HLA-C-204ENST00000415537 NUTM2FA1L443 756 aa36.49■■■■□ 3.43
HLA-C-204ENST00000415537 STAC3Q96MF2 364 aa36.49■■■■□ 3.43
HLA-C-204ENST00000415537 NPHP3Q7Z494 1330 aa36.46■■■■□ 3.43
HLA-C-204ENST00000415537 FMN2Q9NZ56 1722 aa36.44■■■■□ 3.42
HLA-C-204ENST00000415537 PRAM1Q96QH2 718 aa36.43■■■■□ 3.42
HLA-C-204ENST00000415537 POGKQ9P215 609 aa36.42■■■■□ 3.42
HLA-C-204ENST00000415537 SAFB2Q14151 953 aaKnown RBP eCLIP36.41■■■■□ 3.42
HLA-C-204ENST00000415537 FOXO3O43524 673 aa36.4■■■■□ 3.42
HLA-C-204ENST00000415537 DLC1Q96QB1 1528 aa36.39■■■■□ 3.42
HLA-C-204ENST00000415537 ADGRB1O14514 1584 aa36.37■■■■□ 3.41
HLA-C-204ENST00000415537 C8orf37Q96NL8 207 aa36.37■■■■□ 3.41
HLA-C-204ENST00000415537 TRAK1Q9UPV9 953 aa36.37■■■■□ 3.41
HLA-C-204ENST00000415537 AFF2P51816 1311 aa36.36■■■■□ 3.41
HLA-C-204ENST00000415537 XPCQ01831 940 aaPredicted RBP36.34■■■■□ 3.41
HLA-C-204ENST00000415537 KIF1AQ12756 1690 aa36.34■■■■□ 3.41
HLA-C-204ENST00000415537 RGPD8O14715 1765 aaPredicted RBP36.33■■■■□ 3.41
HLA-C-204ENST00000415537 PXDNQ92626 1479 aa36.33■■■■□ 3.41
HLA-C-204ENST00000415537 ADAMTS2O95450 1211 aa36.33■■■■□ 3.41
HLA-C-204ENST00000415537 RXRBP28702 533 aa36.29■■■■□ 3.4
HLA-C-204ENST00000415537 NGLY1Q96IV0 654 aa36.29■■■■□ 3.4
HLA-C-204ENST00000415537 COL22A1Q8NFW1 1626 aaPredicted RBP36.29■■■■□ 3.4
HLA-C-204ENST00000415537 PHF8Q9UPP1 1060 aa36.26■■■■□ 3.4
HLA-C-204ENST00000415537 ADGRB2O60241 1585 aa36.23■■■■□ 3.39
HLA-C-204ENST00000415537 KRT28Q7Z3Y7 464 aa36.22■■■■□ 3.39
HLA-C-204ENST00000415537 HIRIP3Q9BW71 556 aaPredicted RBP36.22■■■■□ 3.39
HLA-C-204ENST00000415537 MINK1Q8N4C8 1332 aaPredicted RBP36.22■■■■□ 3.39
HLA-C-204ENST00000415537 QTRT2Q9H974 415 aaKnown RBP36.21■■■■□ 3.39
HLA-C-204ENST00000415537 PSME1Q06323 249 aa36.19■■■■□ 3.38
HLA-C-204ENST00000415537 ANKARQ7Z5J8 1434 aa36.18■■■■□ 3.38
HLA-C-204ENST00000415537 SPATA31A3Q5VYP0 1347 aa36.17■■■■□ 3.38
HLA-C-204ENST00000415537 ARHGEF28Q8N1W1 1705 aaKnown RBP36.17■■■■□ 3.38
HLA-C-204ENST00000415537 EIF3AQ14152 1382 aaKnown RBP36.16■■■■□ 3.38
HLA-C-204ENST00000415537 KIAA1210Q9ULL0 1709 aa36.16■■■■□ 3.38
HLA-C-204ENST00000415537 USP32Q8NFA0 1604 aa36.15■■■■□ 3.38
HLA-C-204ENST00000415537 USP21Q9UK80 565 aa36.14■■■■□ 3.38
HLA-C-204ENST00000415537 MARF1Q9Y4F3 1742 aaKnown RBP36.14■■■■□ 3.38
HLA-C-204ENST00000415537 RBM6P78332 1123 aaKnown RBP36.13■■■■□ 3.37
HLA-C-204ENST00000415537 PMFBP1Q8TBY8 1022 aa36.13■■■■□ 3.37
HLA-C-204ENST00000415537 CDK12Q9NYV4 1490 aaPredicted RBP36.12■■■■□ 3.37
HLA-C-204ENST00000415537 WASLO00401 505 aaPredicted RBP36.12■■■■□ 3.37
HLA-C-204ENST00000415537 FNBP4Q8N3X1 1017 aaPredicted RBP36.1■■■■□ 3.37
HLA-C-204ENST00000415537 TNS3Q68CZ2 1445 aa36.08■■■■□ 3.37
HLA-C-204ENST00000415537 TULP4Q9NRJ4 1543 aa36.08■■■■□ 3.37
HLA-C-204ENST00000415537 TRPC5Q9UL62 973 aaPredicted RBP36.07■■■■□ 3.36
HLA-C-204ENST00000415537 SBNO1A3KN83 1393 aa36.06■■■■□ 3.36
HLA-C-204ENST00000415537 LMOD2Q6P5Q4 547 aa36.06■■■■□ 3.36
HLA-C-204ENST00000415537 HAP1P54257 671 aaPredicted RBP36.05■■■■□ 3.36
HLA-C-204ENST00000415537 NBPF1Q3BBV0 1214 aa36.04■■■■□ 3.36
HLA-C-204ENST00000415537 PRR36Q9H6K5 1346 aa36.04■■■■□ 3.36
HLA-C-204ENST00000415537 SIN3AQ96ST3 1273 aa36.02■■■■□ 3.36
HLA-C-204ENST00000415537 ARHGEF10O15013 1369 aa36.02■■■■□ 3.36
HLA-C-204ENST00000415537 GPRASP1Q5JY77 1395 aa36.02■■■■□ 3.36
HLA-C-204ENST00000415537 L3MBTL2Q969R5 705 aa36.01■■■■□ 3.36
HLA-C-204ENST00000415537 NEUROD1Q13562 356 aa36■■■■□ 3.35
HLA-C-204ENST00000415537 PLEKHG5O94827 1062 aa35.99■■■■□ 3.35
HLA-C-204ENST00000415537 ITSN1Q15811 1721 aa35.99■■■■□ 3.35
HLA-C-204ENST00000415537 NGDNQ8NEJ9 315 aaKnown RBP35.98■■■■□ 3.35
HLA-C-204ENST00000415537 RGS12O14924 1447 aa35.98■■■■□ 3.35
HLA-C-204ENST00000415537 CABLES1Q8TDN4 633 aa35.96■■■■□ 3.35
HLA-C-204ENST00000415537 NUDT16Q96DE0 195 aaKnown RBP35.96■■■■□ 3.35
HLA-C-204ENST00000415537 ATRNO75882 1429 aa35.96■■■■□ 3.35
HLA-C-204ENST00000415537 BCL9LQ86UU0 1499 aa35.96■■■■□ 3.35
HLA-C-204ENST00000415537 CDK19Q9BWU1 502 aa35.95■■■■□ 3.35
HLA-C-204ENST00000415537 UPF1Q92900 1129 aaKnown RBP eCLIP35.94■■■■□ 3.34
HLA-C-204ENST00000415537 TRPM3Q9HCF6 1732 aaPredicted RBP35.94■■■■□ 3.34
HLA-C-204ENST00000415537 ATP7BP35670 1465 aa35.92■■■■□ 3.34
HLA-C-204ENST00000415537 ABCA3Q99758 1704 aa35.9■■■■□ 3.34
HLA-C-204ENST00000415537 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.9■■■■□ 3.34
HLA-C-204ENST00000415537 PAK3O75914 559 aaPredicted RBP35.89■■■■□ 3.34
HLA-C-204ENST00000415537 UNC5CLQ8IV45 518 aa35.89■■■■□ 3.34
HLA-C-204ENST00000415537 CENPJQ9HC77 1338 aaPredicted RBP35.88■■■■□ 3.33
HLA-C-204ENST00000415537 SLIT2O94813 1529 aa35.88■■■■□ 3.33
HLA-C-204ENST00000415537 ALS2Q96Q42 1657 aa35.88■■■■□ 3.33
HLA-C-204ENST00000415537 GJD4Q96KN9 370 aaPredicted RBP35.86■■■■□ 3.33
HLA-C-204ENST00000415537 CCDC61Q9Y6R9 512 aa35.84■■■■□ 3.33
HLA-C-204ENST00000415537 TRPM1Q7Z4N2 1603 aa35.83■■■■□ 3.33
HLA-C-204ENST00000415537 QRICH2Q9H0J4 1663 aa35.81■■■■□ 3.32
HLA-C-204ENST00000415537 SRPK2P78362 688 aaKnown RBP35.81■■■■□ 3.32
HLA-C-204ENST00000415537 TRIM26Q12899 539 aaPredicted RBP35.81■■■■□ 3.32
HLA-C-204ENST00000415537 PLCH1Q4KWH8 1693 aa35.81■■■■□ 3.32
HLA-C-204ENST00000415537 TOPAZ1Q8N9V7 1692 aa35.81■■■■□ 3.32
HLA-C-204ENST00000415537 NWD2Q9ULI1 1742 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms