RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 ROBO2Q9HCK4 1378 aa29.49■■■□□ 2.31
CEACAM3-203ENST00000415495 PIK3R4Q99570 1358 aa29.48■■■□□ 2.31
CEACAM3-203ENST00000415495 AMOTL2Q9Y2J4 779 aa29.47■■■□□ 2.31
CEACAM3-203ENST00000415495 PRKRIP1Q9H875 184 aaPredicted RBP29.46■■■□□ 2.31
CEACAM3-203ENST00000415495 NCKAP5LQ9HCH0 1330 aa29.46■■■□□ 2.31
CEACAM3-203ENST00000415495 NPHP4O75161 1426 aaPredicted RBP29.46■■■□□ 2.31
CEACAM3-203ENST00000415495 CCER2I3L3R5 266 aa29.42■■■□□ 2.3
CEACAM3-203ENST00000415495 CABP2Q9NPB3 220 aa29.42■■■□□ 2.3
CEACAM3-203ENST00000415495 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
CEACAM3-203ENST00000415495 PTCH1Q13635 1447 aa29.4■■■□□ 2.3
CEACAM3-203ENST00000415495 CDK19Q9BWU1 502 aa29.4■■■□□ 2.3
CEACAM3-203ENST00000415495 SLC12A5Q9H2X9 1139 aa29.38■■■□□ 2.29
CEACAM3-203ENST00000415495 SRPK2P78362 688 aaKnown RBP29.37■■■□□ 2.29
CEACAM3-203ENST00000415495 LMTK3Q96Q04 1460 aa29.36■■■□□ 2.29
CEACAM3-203ENST00000415495 KCNA6P17658 529 aa29.35■■■□□ 2.29
CEACAM3-203ENST00000415495 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.35■■■□□ 2.29
CEACAM3-203ENST00000415495 CHD2O14647 1828 aaKnown RBP29.35■■■□□ 2.29
CEACAM3-203ENST00000415495 WASLO00401 505 aaPredicted RBP29.34■■■□□ 2.29
CEACAM3-203ENST00000415495 HSPA2P54652 639 aa29.34■■■□□ 2.29
CEACAM3-203ENST00000415495 ATAD2Q6PL18 1390 aa29.34■■■□□ 2.29
CEACAM3-203ENST00000415495 CARD14Q9BXL6 1004 aa29.34■■■□□ 2.29
CEACAM3-203ENST00000415495 TMC1Q8TDI8 760 aa29.33■■■□□ 2.29
CEACAM3-203ENST00000415495 ADGRB2O60241 1585 aa29.31■■■□□ 2.28
CEACAM3-203ENST00000415495 NINLQ9Y2I6 1382 aa29.31■■■□□ 2.28
CEACAM3-203ENST00000415495 AMER1Q5JTC6 1135 aaPredicted RBP29.3■■■□□ 2.28
CEACAM3-203ENST00000415495 KNSTRNQ9Y448 316 aa29.3■■■□□ 2.28
CEACAM3-203ENST00000415495 KTN1Q86UP2 1357 aaKnown RBP29.29■■■□□ 2.28
CEACAM3-203ENST00000415495 RALBP1Q15311 655 aa29.27■■■□□ 2.28
CEACAM3-203ENST00000415495 CNGB1Q14028 1251 aaPredicted RBP29.27■■■□□ 2.28
CEACAM3-203ENST00000415495 PARD3Q8TEW0 1356 aa29.26■■■□□ 2.27
CEACAM3-203ENST00000415495 ANKRD36BQ8N2N9 1353 aa29.25■■■□□ 2.27
CEACAM3-203ENST00000415495 NPC1L1Q9UHC9 1359 aa29.25■■■□□ 2.27
CEACAM3-203ENST00000415495 CCDC184Q52MB2 194 aa29.23■■■□□ 2.27
CEACAM3-203ENST00000415495 CC2D1BQ5T0F9 858 aaKnown RBP29.23■■■□□ 2.27
CEACAM3-203ENST00000415495 CABP1Q9NZU7 370 aa29.22■■■□□ 2.27
CEACAM3-203ENST00000415495 CD163L1Q9NR16 1453 aa29.22■■■□□ 2.27
CEACAM3-203ENST00000415495 NWD1Q149M9 1564 aa29.21■■■□□ 2.27
CEACAM3-203ENST00000415495 NUDT16Q96DE0 195 aaKnown RBP29.21■■■□□ 2.27
CEACAM3-203ENST00000415495 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.26
CEACAM3-203ENST00000415495 NSD3Q9BZ95 1437 aa29.19■■■□□ 2.26
CEACAM3-203ENST00000415495 STRCQ7RTU9 1775 aa29.19■■■□□ 2.26
CEACAM3-203ENST00000415495 A0A1W2PP64 1363 aa29.18■■■□□ 2.26
CEACAM3-203ENST00000415495 MYBBP1AQ9BQG0 1328 aaKnown RBP29.17■■■□□ 2.26
CEACAM3-203ENST00000415495 CCDC61Q9Y6R9 512 aa29.17■■■□□ 2.26
CEACAM3-203ENST00000415495 ATP7BP35670 1465 aa29.17■■■□□ 2.26
CEACAM3-203ENST00000415495 TERF2IPQ9NYB0 399 aa29.16■■■□□ 2.26
CEACAM3-203ENST00000415495 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
CEACAM3-203ENST00000415495 USP32Q8NFA0 1604 aa29.13■■■□□ 2.25
CEACAM3-203ENST00000415495 CPSF1Q10570 1443 aaKnown RBP29.11■■■□□ 2.25
CEACAM3-203ENST00000415495 HDGFL2Q7Z4V5 671 aaPredicted RBP29.11■■■□□ 2.25
CEACAM3-203ENST00000415495 MRS2Q9HD23 443 aa29.11■■■□□ 2.25
CEACAM3-203ENST00000415495 RBM33Q96EV2 1170 aaKnown RBP29.1■■■□□ 2.25
CEACAM3-203ENST00000415495 YTHDC1Q96MU7 727 aaKnown RBP29.09■■■□□ 2.25
CEACAM3-203ENST00000415495 NALCNQ8IZF0 1738 aa29.08■■■□□ 2.25
CEACAM3-203ENST00000415495 CGNL1Q0VF96 1302 aa29.08■■■□□ 2.25
CEACAM3-203ENST00000415495 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
CEACAM3-203ENST00000415495 TOPAZ1Q8N9V7 1692 aa29.08■■■□□ 2.25
CEACAM3-203ENST00000415495 PLEKHG3A1L390 1219 aa29.08■■■□□ 2.25
CEACAM3-203ENST00000415495 BRD4O60885 1362 aaPredicted RBP29.07■■■□□ 2.24
CEACAM3-203ENST00000415495 ADGRL3Q9HAR2 1447 aa29.07■■■□□ 2.24
CEACAM3-203ENST00000415495 NUTM2FA1L443 756 aa29.07■■■□□ 2.24
CEACAM3-203ENST00000415495 NLRP13Q86W25 1043 aa29.07■■■□□ 2.24
CEACAM3-203ENST00000415495 CDC42BPGQ6DT37 1551 aa29.06■■■□□ 2.24
CEACAM3-203ENST00000415495 PROSER2Q86WR7 435 aaPredicted RBP29.05■■■□□ 2.24
CEACAM3-203ENST00000415495 STRCP1A6NGW2 1772 aa29.05■■■□□ 2.24
CEACAM3-203ENST00000415495 ANKARQ7Z5J8 1434 aa29.04■■■□□ 2.24
CEACAM3-203ENST00000415495 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
CEACAM3-203ENST00000415495 FMN2Q9NZ56 1722 aa29.04■■■□□ 2.24
CEACAM3-203ENST00000415495 NSD2O96028 1365 aa29.03■■■□□ 2.24
CEACAM3-203ENST00000415495 FYB1O15117 783 aa29.01■■■□□ 2.23
CEACAM3-203ENST00000415495 ZNF692Q9BU19 519 aaPredicted RBP29.01■■■□□ 2.23
CEACAM3-203ENST00000415495 AKAP12Q02952 1782 aa28.99■■■□□ 2.23
CEACAM3-203ENST00000415495 RGPD8O14715 1765 aaPredicted RBP28.99■■■□□ 2.23
CEACAM3-203ENST00000415495 ACEP12821 1306 aa28.98■■■□□ 2.23
CEACAM3-203ENST00000415495 PNISRQ8TF01 805 aaKnown RBP28.98■■■□□ 2.23
CEACAM3-203ENST00000415495 EDC4Q6P2E9 1401 aaKnown RBP28.98■■■□□ 2.23
CEACAM3-203ENST00000415495 MORC1Q86VD1 984 aa28.98■■■□□ 2.23
CEACAM3-203ENST00000415495 MON2Q7Z3U7 1717 aa28.97■■■□□ 2.23
CEACAM3-203ENST00000415495 NCOA3Q9Y6Q9 1424 aa28.97■■■□□ 2.23
CEACAM3-203ENST00000415495 ITSN1Q15811 1721 aa28.96■■■□□ 2.23
CEACAM3-203ENST00000415495 POLR3AO14802 1390 aaPredicted RBP28.95■■■□□ 2.22
CEACAM3-203ENST00000415495 TMEM94Q12767 1356 aa28.94■■■□□ 2.22
CEACAM3-203ENST00000415495 C14orf37Q86TY3 774 aa28.94■■■□□ 2.22
CEACAM3-203ENST00000415495 GGNBP2Q9H3C7 697 aa28.94■■■□□ 2.22
CEACAM3-203ENST00000415495 C19orf44Q9H6X5 657 aa28.94■■■□□ 2.22
CEACAM3-203ENST00000415495 FAM9BQ8IZU0 186 aa28.93■■■□□ 2.22
CEACAM3-203ENST00000415495 PMFBP1Q8TBY8 1022 aa28.92■■■□□ 2.22
CEACAM3-203ENST00000415495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.91■■■□□ 2.22
CEACAM3-203ENST00000415495 DMRT2Q9Y5R5 561 aa28.91■■■□□ 2.22
CEACAM3-203ENST00000415495 USP6P35125 1406 aa28.9■■■□□ 2.22
CEACAM3-203ENST00000415495 SSH2Q76I76 1423 aa28.9■■■□□ 2.22
CEACAM3-203ENST00000415495 ZNF335Q9H4Z2 1342 aaPredicted RBP28.89■■■□□ 2.22
CEACAM3-203ENST00000415495 ANKRD26Q9UPS8 1709 aa28.89■■■□□ 2.22
CEACAM3-203ENST00000415495 KIF20BQ96Q89 1820 aa28.89■■■□□ 2.22
CEACAM3-203ENST00000415495 NRKQ7Z2Y5 1582 aa28.87■■■□□ 2.21
CEACAM3-203ENST00000415495 TTC21BQ7Z4L5 1316 aa28.87■■■□□ 2.21
CEACAM3-203ENST00000415495 TNNT2P45379 298 aaPredicted RBP28.86■■■□□ 2.21
CEACAM3-203ENST00000415495 NME9Q86XW9 330 aa28.86■■■□□ 2.21
CEACAM3-203ENST00000415495 NGDNQ8NEJ9 315 aaKnown RBP28.86■■■□□ 2.21
CEACAM3-203ENST00000415495 PHF8Q9UPP1 1060 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms