RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
SCARB1-203ENST00000415380 RRP7AQ9Y3A4 280 aaKnown RBP23.2■■□□□ 1.3
SCARB1-203ENST00000415380 FRAT1Q92837 279 aaPredicted RBP23.19■■□□□ 1.3
SCARB1-203ENST00000415380 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
SCARB1-203ENST00000415380 SLC12A5Q9H2X9 1139 aa23.19■■□□□ 1.3
SCARB1-203ENST00000415380 IQSEC2Q5JU85 1478 aa23.19■■□□□ 1.3
SCARB1-203ENST00000415380 LMTK2Q8IWU2 1503 aa23.19■■□□□ 1.3
SCARB1-203ENST00000415380 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
SCARB1-203ENST00000415380 ZC3H13Q5T200 1668 aaKnown RBP23.18■■□□□ 1.3
SCARB1-203ENST00000415380 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
SCARB1-203ENST00000415380 TCP11L2Q8N4U5 519 aa23.17■■□□□ 1.3
SCARB1-203ENST00000415380 RTN4Q9NQC3 1192 aaKnown RBP23.17■■□□□ 1.3
SCARB1-203ENST00000415380 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
SCARB1-203ENST00000415380 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
SCARB1-203ENST00000415380 FRAT2O75474 233 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-203ENST00000415380 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-203ENST00000415380 SEC24BO95487 1268 aa23.16■■□□□ 1.3
SCARB1-203ENST00000415380 C14orf93Q9H972 538 aaKnown RBP23.15■■□□□ 1.3
SCARB1-203ENST00000415380 WDR63Q8IWG1 891 aa23.13■■□□□ 1.29
SCARB1-203ENST00000415380 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
SCARB1-203ENST00000415380 MTHFSP49914 203 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 TNNQ9UQP3 1299 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 ZNF518AQ6AHZ1 1483 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 PPLO60437 1756 aa23.12■■□□□ 1.29
SCARB1-203ENST00000415380 RLBP1P12271 317 aa23.11■■□□□ 1.29
SCARB1-203ENST00000415380 PMFBP1Q8TBY8 1022 aa23.11■■□□□ 1.29
SCARB1-203ENST00000415380 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
SCARB1-203ENST00000415380 PCDHB15Q9Y5E8 787 aa23.1■■□□□ 1.29
SCARB1-203ENST00000415380 AAMPQ13685 434 aa23.1■■□□□ 1.29
SCARB1-203ENST00000415380 NPATQ14207 1427 aa23.09■■□□□ 1.29
SCARB1-203ENST00000415380 BCL2L13Q9BXK5 485 aa23.09■■□□□ 1.29
SCARB1-203ENST00000415380 NLRP1Q9C000 1473 aa23.09■■□□□ 1.29
SCARB1-203ENST00000415380 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
SCARB1-203ENST00000415380 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
SCARB1-203ENST00000415380 CFAP53Q96M91 514 aa23.08■■□□□ 1.28
SCARB1-203ENST00000415380 BECN1Q14457 450 aa23.04■■□□□ 1.28
SCARB1-203ENST00000415380 PDZRN3Q9UPQ7 1066 aa23.04■■□□□ 1.28
SCARB1-203ENST00000415380 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
SCARB1-203ENST00000415380 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
SCARB1-203ENST00000415380 RPGRIP1LQ68CZ1 1315 aa23.03■■□□□ 1.28
SCARB1-203ENST00000415380 GGT6Q6P531 493 aa23.02■■□□□ 1.28
SCARB1-203ENST00000415380 ZMYM3Q14202 1370 aa23.02■■□□□ 1.28
SCARB1-203ENST00000415380 FRMPD1Q5SYB0 1578 aa23.01■■□□□ 1.27
SCARB1-203ENST00000415380 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
SCARB1-203ENST00000415380 GLI2P10070 1586 aa23.01■■□□□ 1.27
SCARB1-203ENST00000415380 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-203ENST00000415380 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.273e-14■■□□□ 13.6
SCARB1-203ENST00000415380 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
SCARB1-203ENST00000415380 RWDD1Q9H446 243 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-203ENST00000415380 TULP4Q9NRJ4 1543 aa23.01■■□□□ 1.27
SCARB1-203ENST00000415380 EVC2Q86UK5 1308 aa23■■□□□ 1.27
SCARB1-203ENST00000415380 NSD2O96028 1365 aa22.99■■□□□ 1.27
SCARB1-203ENST00000415380 PUS7Q96PZ0 661 aaKnown RBP22.99■■□□□ 1.27
SCARB1-203ENST00000415380 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
SCARB1-203ENST00000415380 ADGRB2O60241 1585 aa22.98■■□□□ 1.27
SCARB1-203ENST00000415380 MVPQ14764 893 aaKnown RBP22.98■■□□□ 1.27
SCARB1-203ENST00000415380 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
SCARB1-203ENST00000415380 TBC1D32Q96NH3 1257 aa22.97■■□□□ 1.27
SCARB1-203ENST00000415380 SLKQ9H2G2 1235 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-203ENST00000415380 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
SCARB1-203ENST00000415380 NUTM2DQ5VT03 806 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-203ENST00000415380 ARHGEF28Q8N1W1 1705 aaKnown RBP22.97■■□□□ 1.27
SCARB1-203ENST00000415380 ABCC3O15438 1527 aa22.95■■□□□ 1.27
SCARB1-203ENST00000415380 ZKSCAN2Q63HK3 967 aa22.95■■□□□ 1.27
SCARB1-203ENST00000415380 CABP2Q9NPB3 220 aa22.95■■□□□ 1.27
SCARB1-203ENST00000415380 POGZQ7Z3K3 1410 aa22.95■■□□□ 1.27
SCARB1-203ENST00000415380 MLH3Q9UHC1 1453 aa22.94■■□□□ 1.26
SCARB1-203ENST00000415380 DZIP1LQ8IYY4 767 aaKnown RBP22.94■■□□□ 1.26
SCARB1-203ENST00000415380 TSR2Q969E8 191 aaKnown RBP22.94■■□□□ 1.26
SCARB1-203ENST00000415380 ANTXR1Q9H6X2 564 aa22.94■■□□□ 1.26
SCARB1-203ENST00000415380 FTSJ3Q8IY81 847 aaKnown RBP22.93■■□□□ 1.26
SCARB1-203ENST00000415380 CAMSAP1Q5T5Y3 1602 aa22.92■■□□□ 1.26
SCARB1-203ENST00000415380 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
SCARB1-203ENST00000415380 CT47B1P0C2W7 299 aaPredicted RBP22.91■■□□□ 1.26
SCARB1-203ENST00000415380 TBC1D2Q9BYX2 928 aa22.91■■□□□ 1.26
SCARB1-203ENST00000415380 POGKQ9P215 609 aa22.91■■□□□ 1.26
SCARB1-203ENST00000415380 NEXMIFQ5QGS0 1516 aa22.91■■□□□ 1.26
SCARB1-203ENST00000415380 SIGLEC1Q9BZZ2 1709 aa22.91■■□□□ 1.26
SCARB1-203ENST00000415380 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
SCARB1-203ENST00000415380 EXOSC9Q06265 439 aaKnown RBP22.9■■□□□ 1.26
SCARB1-203ENST00000415380 PLEKHF1Q96S99 279 aa22.9■■□□□ 1.26
SCARB1-203ENST00000415380 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.26
SCARB1-203ENST00000415380 SMC4Q9NTJ3 1288 aa22.89■■□□□ 1.26
SCARB1-203ENST00000415380 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
SCARB1-203ENST00000415380 A0A1W2PP64 1363 aa22.89■■□□□ 1.25
SCARB1-203ENST00000415380 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.25
SCARB1-203ENST00000415380 U2SURPO15042 1029 aaKnown RBP22.88■■□□□ 1.25
SCARB1-203ENST00000415380 ABCC11Q96J66 1382 aa22.88■■□□□ 1.25
SCARB1-203ENST00000415380 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
SCARB1-203ENST00000415380 TRIM35Q9UPQ4 493 aa22.87■■□□□ 1.25
SCARB1-203ENST00000415380 TRIM27P14373 513 aa22.87■■□□□ 1.25
SCARB1-203ENST00000415380 GGNBP2Q9H3C7 697 aa22.86■■□□□ 1.25
SCARB1-203ENST00000415380 COL3A1P02461 1466 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-203ENST00000415380 SSH1Q8WYL5 1049 aa22.86■■□□□ 1.25
SCARB1-203ENST00000415380 HDAC1Q13547 482 aaPredicted RBP22.84■■□□□ 1.25
SCARB1-203ENST00000415380 SRPK2P78362 688 aaKnown RBP22.83■■□□□ 1.25
SCARB1-203ENST00000415380 ITPRIPQ8IWB1 547 aa22.83■■□□□ 1.25
SCARB1-203ENST00000415380 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms