RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.64■□□□□ 0.09
LINC00330-201ENST00000414562 QRICH2Q9H0J4 1663 aa15.63■□□□□ 0.09
LINC00330-201ENST00000414562 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
LINC00330-201ENST00000414562 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
LINC00330-201ENST00000414562 DISP3Q9P2K9 1392 aa15.63■□□□□ 0.09
LINC00330-201ENST00000414562 PIK3R4Q99570 1358 aa15.62■□□□□ 0.09
LINC00330-201ENST00000414562 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
LINC00330-201ENST00000414562 ZNF335Q9H4Z2 1342 aaPredicted RBP15.62■□□□□ 0.09
LINC00330-201ENST00000414562 CENPJQ9HC77 1338 aaPredicted RBP15.62■□□□□ 0.09
LINC00330-201ENST00000414562 NWD1Q149M9 1564 aa15.61■□□□□ 0.09
LINC00330-201ENST00000414562 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
LINC00330-201ENST00000414562 FAM135BQ49AJ0 1406 aa15.59■□□□□ 0.09
LINC00330-201ENST00000414562 TULP4Q9NRJ4 1543 aa15.59■□□□□ 0.09
LINC00330-201ENST00000414562 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
LINC00330-201ENST00000414562 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
LINC00330-201ENST00000414562 PTCH1Q13635 1447 aa15.58■□□□□ 0.09
LINC00330-201ENST00000414562 POGKQ9P215 609 aa15.58■□□□□ 0.08
LINC00330-201ENST00000414562 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
LINC00330-201ENST00000414562 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
LINC00330-201ENST00000414562 SBNO2Q9Y2G9 1366 aa15.56■□□□□ 0.08
LINC00330-201ENST00000414562 NALCNQ8IZF0 1738 aa15.55■□□□□ 0.08
LINC00330-201ENST00000414562 PROSER2Q86WR7 435 aaPredicted RBP15.53■□□□□ 0.08
LINC00330-201ENST00000414562 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
LINC00330-201ENST00000414562 CCER2I3L3R5 266 aa15.52■□□□□ 0.08
LINC00330-201ENST00000414562 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
LINC00330-201ENST00000414562 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.07
LINC00330-201ENST00000414562 TMEM94Q12767 1356 aa15.52■□□□□ 0.07
LINC00330-201ENST00000414562 LTBP4Q8N2S1 1624 aa15.52■□□□□ 0.07
LINC00330-201ENST00000414562 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
LINC00330-201ENST00000414562 NKTRP30414 1462 aaKnown RBP15.51■□□□□ 0.07
LINC00330-201ENST00000414562 PRR36Q9H6K5 1346 aa15.5■□□□□ 0.07
LINC00330-201ENST00000414562 TMF1P82094 1093 aa15.5■□□□□ 0.07
LINC00330-201ENST00000414562 WASLO00401 505 aaPredicted RBP15.5■□□□□ 0.07
LINC00330-201ENST00000414562 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
LINC00330-201ENST00000414562 MYOM1P52179 1685 aa15.49■□□□□ 0.07
LINC00330-201ENST00000414562 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
LINC00330-201ENST00000414562 NUTM2FA1L443 756 aa15.49■□□□□ 0.07
LINC00330-201ENST00000414562 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
LINC00330-201ENST00000414562 ADGRL3Q9HAR2 1447 aa15.48■□□□□ 0.07
LINC00330-201ENST00000414562 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
LINC00330-201ENST00000414562 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
LINC00330-201ENST00000414562 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
LINC00330-201ENST00000414562 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
LINC00330-201ENST00000414562 ATP7BP35670 1465 aa15.45■□□□□ 0.06
LINC00330-201ENST00000414562 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
LINC00330-201ENST00000414562 PRKRIP1Q9H875 184 aaPredicted RBP15.44■□□□□ 0.06
LINC00330-201ENST00000414562 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
LINC00330-201ENST00000414562 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
LINC00330-201ENST00000414562 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
LINC00330-201ENST00000414562 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
LINC00330-201ENST00000414562 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
LINC00330-201ENST00000414562 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
LINC00330-201ENST00000414562 CABP1Q9NZU7 370 aa15.41■□□□□ 0.06
LINC00330-201ENST00000414562 TOPAZ1Q8N9V7 1692 aa15.41■□□□□ 0.06
LINC00330-201ENST00000414562 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
LINC00330-201ENST00000414562 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
LINC00330-201ENST00000414562 NCOA3Q9Y6Q9 1424 aa15.4■□□□□ 0.06
LINC00330-201ENST00000414562 PANK3Q9H999 370 aa15.39■□□□□ 0.05
LINC00330-201ENST00000414562 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
LINC00330-201ENST00000414562 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
LINC00330-201ENST00000414562 ORAI2Q96SN7 254 aa15.39■□□□□ 0.05
LINC00330-201ENST00000414562 MST1RQ04912 1400 aa15.38■□□□□ 0.05
LINC00330-201ENST00000414562 PPIP5K1Q6PFW1 1433 aa15.37■□□□□ 0.05
LINC00330-201ENST00000414562 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
LINC00330-201ENST00000414562 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
LINC00330-201ENST00000414562 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
LINC00330-201ENST00000414562 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
LINC00330-201ENST00000414562 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
LINC00330-201ENST00000414562 MSH6P52701 1360 aa15.35■□□□□ 0.05
LINC00330-201ENST00000414562 ANKARQ7Z5J8 1434 aa15.35■□□□□ 0.05
LINC00330-201ENST00000414562 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
LINC00330-201ENST00000414562 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
LINC00330-201ENST00000414562 DCCP43146 1447 aa15.34■□□□□ 0.05
LINC00330-201ENST00000414562 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
LINC00330-201ENST00000414562 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
LINC00330-201ENST00000414562 ATF3P18847 181 aa15.33■□□□□ 0.04
LINC00330-201ENST00000414562 ACEP12821 1306 aa15.33■□□□□ 0.04
LINC00330-201ENST00000414562 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
LINC00330-201ENST00000414562 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
LINC00330-201ENST00000414562 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
LINC00330-201ENST00000414562 ANKRD36BQ8N2N9 1353 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 RALBP1Q15311 655 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 CADPS2Q86UW7 1296 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
LINC00330-201ENST00000414562 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 SLAIN2Q9P270 581 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
LINC00330-201ENST00000414562 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
LINC00330-201ENST00000414562 MON2Q7Z3U7 1717 aa15.3■□□□□ 0.04
LINC00330-201ENST00000414562 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
LINC00330-201ENST00000414562 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
LINC00330-201ENST00000414562 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
LINC00330-201ENST00000414562 SSH2Q76I76 1423 aa15.29■□□□□ 0.04
LINC00330-201ENST00000414562 NSD3Q9BZ95 1437 aa15.29■□□□□ 0.04
LINC00330-201ENST00000414562 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
LINC00330-201ENST00000414562 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
LINC00330-201ENST00000414562 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
LINC00330-201ENST00000414562 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
LINC00330-201ENST00000414562 FOXO3O43524 673 aa15.28■□□□□ 0.04
LINC00330-201ENST00000414562 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms