RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
LINC00887-202ENST00000414120 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
LINC00887-202ENST00000414120 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
LINC00887-202ENST00000414120 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
LINC00887-202ENST00000414120 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
LINC00887-202ENST00000414120 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
LINC00887-202ENST00000414120 PTPRKQ15262 1439 aa17.39■□□□□ 0.37
LINC00887-202ENST00000414120 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
LINC00887-202ENST00000414120 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
LINC00887-202ENST00000414120 MLECQ14165 292 aa17.37■□□□□ 0.37
LINC00887-202ENST00000414120 GRPEL1Q9HAV7 217 aa17.37■□□□□ 0.37
LINC00887-202ENST00000414120 ZNF500O60304 480 aaPredicted RBP17.36■□□□□ 0.37
LINC00887-202ENST00000414120 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
LINC00887-202ENST00000414120 KIF3AQ9Y496 699 aa17.36■□□□□ 0.37
LINC00887-202ENST00000414120 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
LINC00887-202ENST00000414120 TTC36A6NLP5 189 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 RAI14Q9P0K7 980 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 ZBTB22O15209 634 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 SATB1Q01826 763 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 TIGD1Q96MW7 591 aa17.35■□□□□ 0.37
LINC00887-202ENST00000414120 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
LINC00887-202ENST00000414120 SASS6Q6UVJ0 657 aa17.34■□□□□ 0.37
LINC00887-202ENST00000414120 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
LINC00887-202ENST00000414120 KCNJ4P48050 445 aa17.33■□□□□ 0.36
LINC00887-202ENST00000414120 BECN1Q14457 450 aa17.33■□□□□ 0.36
LINC00887-202ENST00000414120 BANK1Q8NDB2 785 aa17.33■□□□□ 0.36
LINC00887-202ENST00000414120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC00887-202ENST00000414120 ANKRD30AQ9BXX3 1397 aa17.33■□□□□ 0.36
LINC00887-202ENST00000414120 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.36
LINC00887-202ENST00000414120 GABPB1Q06547 395 aaPredicted RBP17.33■□□□□ 0.36
LINC00887-202ENST00000414120 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
LINC00887-202ENST00000414120 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
LINC00887-202ENST00000414120 AEBP1Q8IUX7 1158 aa17.32■□□□□ 0.36
LINC00887-202ENST00000414120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00887-202ENST00000414120 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
LINC00887-202ENST00000414120 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
LINC00887-202ENST00000414120 MAFGO15525 162 aa17.31■□□□□ 0.36
LINC00887-202ENST00000414120 MYCBPQ99417 103 aaPredicted RBP17.31■□□□□ 0.36
LINC00887-202ENST00000414120 SH3BP1Q9Y3L3 701 aa17.31■□□□□ 0.36
LINC00887-202ENST00000414120 GGT6Q6P531 493 aa17.3■□□□□ 0.36
LINC00887-202ENST00000414120 CERS3Q8IU89 383 aa17.3■□□□□ 0.36
LINC00887-202ENST00000414120 KIF3BO15066 747 aa17.3■□□□□ 0.36
LINC00887-202ENST00000414120 NBPF9Q3BBW0 867 aa17.3■□□□□ 0.36
LINC00887-202ENST00000414120 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
LINC00887-202ENST00000414120 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
LINC00887-202ENST00000414120 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
LINC00887-202ENST00000414120 CEP83Q9Y592 693 aa17.29■□□□□ 0.36
LINC00887-202ENST00000414120 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
LINC00887-202ENST00000414120 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
LINC00887-202ENST00000414120 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
LINC00887-202ENST00000414120 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
LINC00887-202ENST00000414120 MCM5P33992 734 aa17.28■□□□□ 0.36
LINC00887-202ENST00000414120 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
LINC00887-202ENST00000414120 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
LINC00887-202ENST00000414120 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
LINC00887-202ENST00000414120 RICTORQ6R327 1708 aa17.27■□□□□ 0.36
LINC00887-202ENST00000414120 GPATCH11Q8N954 259 aa17.27■□□□□ 0.36
LINC00887-202ENST00000414120 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
LINC00887-202ENST00000414120 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.35
LINC00887-202ENST00000414120 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
LINC00887-202ENST00000414120 ANAPC15P60006 121 aa17.26■□□□□ 0.35
LINC00887-202ENST00000414120 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
LINC00887-202ENST00000414120 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
LINC00887-202ENST00000414120 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
LINC00887-202ENST00000414120 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
LINC00887-202ENST00000414120 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
LINC00887-202ENST00000414120 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
LINC00887-202ENST00000414120 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
LINC00887-202ENST00000414120 KDM5CP41229 1560 aa17.24■□□□□ 0.35
LINC00887-202ENST00000414120 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
LINC00887-202ENST00000414120 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
LINC00887-202ENST00000414120 BRMS1Q9HCU9 246 aa17.23■□□□□ 0.35
LINC00887-202ENST00000414120 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
LINC00887-202ENST00000414120 GTF2F1P35269 517 aaKnown RBP eCLIP17.23■□□□□ 0.35
LINC00887-202ENST00000414120 ZNF771Q7L3S4 317 aaPredicted RBP17.23■□□□□ 0.35
LINC00887-202ENST00000414120 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
LINC00887-202ENST00000414120 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
LINC00887-202ENST00000414120 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 CCDC172P0C7W6 258 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 FEZ1Q99689 392 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 CBX1P83916 185 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 KIDINS220Q9ULH0 1771 aa17.22■□□□□ 0.35
LINC00887-202ENST00000414120 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
LINC00887-202ENST00000414120 A2MP01023 1474 aa17.21■□□□□ 0.35
LINC00887-202ENST00000414120 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
LINC00887-202ENST00000414120 RAD50Q92878 1312 aa17.21■□□□□ 0.35
LINC00887-202ENST00000414120 NAIPQ13075 1403 aa17.2■□□□□ 0.34
LINC00887-202ENST00000414120 ATP10AO60312 1499 aa17.2■□□□□ 0.34
LINC00887-202ENST00000414120 LOC102724159A0A0B4J2E5 919 aa17.2■□□□□ 0.34
LINC00887-202ENST00000414120 PWP2Q15269 919 aaKnown RBP17.2■□□□□ 0.34
LINC00887-202ENST00000414120 IRF6O14896 467 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 CAPN2P17655 700 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 MYRIPQ8NFW9 859 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
LINC00887-202ENST00000414120 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
LINC00887-202ENST00000414120 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
LINC00887-202ENST00000414120 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms