RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 EXOSC9Q06265 439 aaKnown RBP18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 RWDD1Q9H446 243 aaPredicted RBP18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 PLCH2O75038 1416 aa18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 SCAPERQ9BY12 1400 aa18.54■□□□□ 0.56
SEMA3F-202ENST00000413852 MCM4P33991 863 aa18.53■□□□□ 0.56
SEMA3F-202ENST00000413852 CEP152O94986 1710 aa18.53■□□□□ 0.56
SEMA3F-202ENST00000413852 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
SEMA3F-202ENST00000413852 SMC4Q9NTJ3 1288 aa18.53■□□□□ 0.56
SEMA3F-202ENST00000413852 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
SEMA3F-202ENST00000413852 POLR3AO14802 1390 aaPredicted RBP18.52■□□□□ 0.55
SEMA3F-202ENST00000413852 SPHKAPQ2M3C7 1700 aa18.51■□□□□ 0.55
SEMA3F-202ENST00000413852 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
SEMA3F-202ENST00000413852 TRPM2O94759 1503 aa18.51■□□□□ 0.55
SEMA3F-202ENST00000413852 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
SEMA3F-202ENST00000413852 GOLGA6L3A6NEY3 463 aa18.5■□□□□ 0.55
SEMA3F-202ENST00000413852 TRIM27P14373 513 aa18.5■□□□□ 0.55
SEMA3F-202ENST00000413852 FBLN1P23142 703 aa18.5■□□□□ 0.55
SEMA3F-202ENST00000413852 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
SEMA3F-202ENST00000413852 PTPRTO14522 1441 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 TRAK2O60296 914 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 NOS1P29475 1434 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
SEMA3F-202ENST00000413852 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
SEMA3F-202ENST00000413852 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
SEMA3F-202ENST00000413852 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
SEMA3F-202ENST00000413852 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
SEMA3F-202ENST00000413852 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 RSPH6AQ9H0K4 717 aa18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 STK26Q9P289 416 aa18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 C1orf115Q9H7X2 142 aa18.47■□□□□ 0.55
SEMA3F-202ENST00000413852 GGT6Q6P531 493 aa18.46■□□□□ 0.55
SEMA3F-202ENST00000413852 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
SEMA3F-202ENST00000413852 ABCC1P33527 1531 aa18.46■□□□□ 0.55
SEMA3F-202ENST00000413852 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
SEMA3F-202ENST00000413852 SHPRHQ149N8 1683 aa18.45■□□□□ 0.54
SEMA3F-202ENST00000413852 UBE2Q2Q8WVN8 375 aa18.45■□□□□ 0.54
SEMA3F-202ENST00000413852 KANK1Q14678 1352 aa18.44■□□□□ 0.54
SEMA3F-202ENST00000413852 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
SEMA3F-202ENST00000413852 MYH16Q9H6N6 1097 aa18.44■□□□□ 0.54
SEMA3F-202ENST00000413852 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
SEMA3F-202ENST00000413852 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
SEMA3F-202ENST00000413852 CD2BP2O95400 341 aaKnown RBP18.43■□□□□ 0.54
SEMA3F-202ENST00000413852 IQSEC2Q5JU85 1478 aa18.43■□□□□ 0.54
SEMA3F-202ENST00000413852 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
SEMA3F-202ENST00000413852 FSD2A1L4K1 749 aa18.42■□□□□ 0.54
SEMA3F-202ENST00000413852 CHMP5Q9NZZ3 219 aa18.42■□□□□ 0.54
SEMA3F-202ENST00000413852 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
SEMA3F-202ENST00000413852 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
SEMA3F-202ENST00000413852 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
SEMA3F-202ENST00000413852 CHD1O14646 1710 aa18.41■□□□□ 0.54
SEMA3F-202ENST00000413852 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
SEMA3F-202ENST00000413852 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
SEMA3F-202ENST00000413852 HSCBQ8IWL3 235 aa18.4■□□□□ 0.54
SEMA3F-202ENST00000413852 ERBB4Q15303 1308 aa18.4■□□□□ 0.54
SEMA3F-202ENST00000413852 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
SEMA3F-202ENST00000413852 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
SEMA3F-202ENST00000413852 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
SEMA3F-202ENST00000413852 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
SEMA3F-202ENST00000413852 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.53
SEMA3F-202ENST00000413852 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
SEMA3F-202ENST00000413852 RIPK4P57078 832 aa18.38■□□□□ 0.53
SEMA3F-202ENST00000413852 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
SEMA3F-202ENST00000413852 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
SEMA3F-202ENST00000413852 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
SEMA3F-202ENST00000413852 PNNQ9H307 717 aaKnown RBP18.37■□□□□ 0.53
SEMA3F-202ENST00000413852 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
SEMA3F-202ENST00000413852 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
SEMA3F-202ENST00000413852 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
SEMA3F-202ENST00000413852 C14orf93Q9H972 538 aaKnown RBP18.35■□□□□ 0.53
SEMA3F-202ENST00000413852 GRPEL1Q9HAV7 217 aa18.35■□□□□ 0.53
SEMA3F-202ENST00000413852 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
SEMA3F-202ENST00000413852 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
SEMA3F-202ENST00000413852 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
SEMA3F-202ENST00000413852 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
SEMA3F-202ENST00000413852 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
SEMA3F-202ENST00000413852 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
SEMA3F-202ENST00000413852 DDX19BQ9UMR2 479 aa18.33■□□□□ 0.53
SEMA3F-202ENST00000413852 TET3O43151 1660 aa18.33■□□□□ 0.52
SEMA3F-202ENST00000413852 HDAC1Q13547 482 aaPredicted RBP18.32■□□□□ 0.52
SEMA3F-202ENST00000413852 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
SEMA3F-202ENST00000413852 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
SEMA3F-202ENST00000413852 HSP90AA1P07900 732 aaKnown RBP18.32■□□□□ 0.52
SEMA3F-202ENST00000413852 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SEMA3F-202ENST00000413852 FANCAO15360 1455 aa18.31■□□□□ 0.52
SEMA3F-202ENST00000413852 HMOX1P09601 288 aa18.31■□□□□ 0.52
SEMA3F-202ENST00000413852 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
SEMA3F-202ENST00000413852 KIF2CQ99661 725 aa18.3■□□□□ 0.52
SEMA3F-202ENST00000413852 SSFA2P28290 1259 aa18.3■□□□□ 0.52
SEMA3F-202ENST00000413852 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
SEMA3F-202ENST00000413852 MYOM2P54296 1465 aa18.29■□□□□ 0.52
SEMA3F-202ENST00000413852 NUCB1Q02818 461 aa18.29■□□□□ 0.52
SEMA3F-202ENST00000413852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
SEMA3F-202ENST00000413852 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms