RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 HRCP23327 699 aa24.64■■□□□ 1.54
COL6A2-205ENST00000413758 ESCO1Q5FWF5 840 aa24.64■■□□□ 1.54
COL6A2-205ENST00000413758 CFAP70Q5T0N1 1121 aa24.64■■□□□ 1.54
COL6A2-205ENST00000413758 C14orf93Q9H972 538 aaKnown RBP24.64■■□□□ 1.54
COL6A2-205ENST00000413758 TECPR2O15040 1411 aa24.63■■□□□ 1.53
COL6A2-205ENST00000413758 NUTM2FA1L443 756 aa24.63■■□□□ 1.53
COL6A2-205ENST00000413758 MYOM2P54296 1465 aa24.63■■□□□ 1.53
COL6A2-205ENST00000413758 ZNF772Q68DY9 489 aaPredicted RBP24.62■■□□□ 1.53
COL6A2-205ENST00000413758 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
COL6A2-205ENST00000413758 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
COL6A2-205ENST00000413758 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
COL6A2-205ENST00000413758 CDC42BPGQ6DT37 1551 aa24.62■■□□□ 1.53
COL6A2-205ENST00000413758 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
COL6A2-205ENST00000413758 PNPLA6Q8IY17 1366 aa24.6■■□□□ 1.53
COL6A2-205ENST00000413758 NRXN1Q9ULB1 1477 aa24.59■■□□□ 1.53
COL6A2-205ENST00000413758 LAMC1P11047 1609 aa24.59■■□□□ 1.53
COL6A2-205ENST00000413758 DCAF11Q8TEB1 546 aa24.58■■□□□ 1.53
COL6A2-205ENST00000413758 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
COL6A2-205ENST00000413758 SOS2Q07890 1332 aaPredicted RBP24.57■■□□□ 1.52
COL6A2-205ENST00000413758 C8orf37Q96NL8 207 aa24.56■■□□□ 1.52
COL6A2-205ENST00000413758 NPHP3Q7Z494 1330 aa24.56■■□□□ 1.52
COL6A2-205ENST00000413758 SIRT1Q96EB6 747 aa24.55■■□□□ 1.52
COL6A2-205ENST00000413758 POGKQ9P215 609 aa24.55■■□□□ 1.52
COL6A2-205ENST00000413758 AFF2P51816 1311 aa24.55■■□□□ 1.52
COL6A2-205ENST00000413758 ADAMTS2O95450 1211 aa24.54■■□□□ 1.52
COL6A2-205ENST00000413758 FOXO3O43524 673 aa24.53■■□□□ 1.52
COL6A2-205ENST00000413758 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
COL6A2-205ENST00000413758 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
COL6A2-205ENST00000413758 NGLY1Q96IV0 654 aa24.5■■□□□ 1.51
COL6A2-205ENST00000413758 TRAK1Q9UPV9 953 aa24.5■■□□□ 1.51
COL6A2-205ENST00000413758 FMN2Q9NZ56 1722 aa24.49■■□□□ 1.51
COL6A2-205ENST00000413758 RXRBP28702 533 aa24.49■■□□□ 1.51
COL6A2-205ENST00000413758 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
COL6A2-205ENST00000413758 PXDNQ92626 1479 aa24.45■■□□□ 1.5
COL6A2-205ENST00000413758 DLC1Q96QB1 1528 aa24.44■■□□□ 1.5
COL6A2-205ENST00000413758 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
COL6A2-205ENST00000413758 PHF8Q9UPP1 1060 aa24.43■■□□□ 1.5
COL6A2-205ENST00000413758 ADGRB1O14514 1584 aa24.42■■□□□ 1.5
COL6A2-205ENST00000413758 KRT28Q7Z3Y7 464 aa24.42■■□□□ 1.5
COL6A2-205ENST00000413758 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
COL6A2-205ENST00000413758 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
COL6A2-205ENST00000413758 MINK1Q8N4C8 1332 aaPredicted RBP24.41■■□□□ 1.5
COL6A2-205ENST00000413758 RGPD8O14715 1765 aaPredicted RBP24.39■■□□□ 1.5
COL6A2-205ENST00000413758 COL22A1Q8NFW1 1626 aaPredicted RBP24.39■■□□□ 1.5
COL6A2-205ENST00000413758 USP21Q9UK80 565 aa24.39■■□□□ 1.49
COL6A2-205ENST00000413758 PSME1Q06323 249 aa24.38■■□□□ 1.49
COL6A2-205ENST00000413758 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
COL6A2-205ENST00000413758 RBM6P78332 1123 aaKnown RBP24.37■■□□□ 1.49
COL6A2-205ENST00000413758 HAP1P54257 671 aaPredicted RBP24.36■■□□□ 1.49
COL6A2-205ENST00000413758 LMOD2Q6P5Q4 547 aa24.36■■□□□ 1.49
COL6A2-205ENST00000413758 PMFBP1Q8TBY8 1022 aa24.36■■□□□ 1.49
COL6A2-205ENST00000413758 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
COL6A2-205ENST00000413758 ANKARQ7Z5J8 1434 aa24.34■■□□□ 1.49
COL6A2-205ENST00000413758 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
COL6A2-205ENST00000413758 ADGRB2O60241 1585 aa24.33■■□□□ 1.48
COL6A2-205ENST00000413758 CDK12Q9NYV4 1490 aaPredicted RBP24.32■■□□□ 1.48
COL6A2-205ENST00000413758 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
COL6A2-205ENST00000413758 WASLO00401 505 aaPredicted RBP24.31■■□□□ 1.48
COL6A2-205ENST00000413758 TNS3Q68CZ2 1445 aa24.3■■□□□ 1.48
COL6A2-205ENST00000413758 FNBP4Q8N3X1 1017 aaPredicted RBP24.3■■□□□ 1.48
COL6A2-205ENST00000413758 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
COL6A2-205ENST00000413758 RGS12O14924 1447 aa24.27■■□□□ 1.48
COL6A2-205ENST00000413758 ARHGEF28Q8N1W1 1705 aaKnown RBP24.27■■□□□ 1.48
COL6A2-205ENST00000413758 MARF1Q9Y4F3 1742 aaKnown RBP24.27■■□□□ 1.48
COL6A2-205ENST00000413758 SBNO1A3KN83 1393 aa24.27■■□□□ 1.48
COL6A2-205ENST00000413758 GPRASP1Q5JY77 1395 aa24.27■■□□□ 1.48
COL6A2-205ENST00000413758 TULP4Q9NRJ4 1543 aa24.26■■□□□ 1.47
COL6A2-205ENST00000413758 NGDNQ8NEJ9 315 aaKnown RBP24.26■■□□□ 1.47
COL6A2-205ENST00000413758 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
COL6A2-205ENST00000413758 UPF1Q92900 1129 aaKnown RBP eCLIP24.26■■□□□ 1.47
COL6A2-205ENST00000413758 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
COL6A2-205ENST00000413758 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
COL6A2-205ENST00000413758 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
COL6A2-205ENST00000413758 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
COL6A2-205ENST00000413758 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
COL6A2-205ENST00000413758 SIN3AQ96ST3 1273 aa24.23■■□□□ 1.47
COL6A2-205ENST00000413758 ATRNO75882 1429 aa24.23■■□□□ 1.47
COL6A2-205ENST00000413758 PAK3O75914 559 aaPredicted RBP24.21■■□□□ 1.47
COL6A2-205ENST00000413758 L3MBTL2Q969R5 705 aa24.21■■□□□ 1.47
COL6A2-205ENST00000413758 NUDT16Q96DE0 195 aaKnown RBP24.21■■□□□ 1.47
COL6A2-205ENST00000413758 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
COL6A2-205ENST00000413758 BCL9LQ86UU0 1499 aa24.2■■□□□ 1.47
COL6A2-205ENST00000413758 UNC5CLQ8IV45 518 aa24.19■■□□□ 1.46
COL6A2-205ENST00000413758 GJD4Q96KN9 370 aaPredicted RBP24.17■■□□□ 1.46
COL6A2-205ENST00000413758 ITSN1Q15811 1721 aa24.16■■□□□ 1.46
COL6A2-205ENST00000413758 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
COL6A2-205ENST00000413758 CENPJQ9HC77 1338 aaPredicted RBP24.14■■□□□ 1.46
COL6A2-205ENST00000413758 ATP7BP35670 1465 aa24.14■■□□□ 1.46
COL6A2-205ENST00000413758 TRPM3Q9HCF6 1732 aaPredicted RBP24.14■■□□□ 1.45
COL6A2-205ENST00000413758 SLIT2O94813 1529 aa24.14■■□□□ 1.45
COL6A2-205ENST00000413758 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.45
COL6A2-205ENST00000413758 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
COL6A2-205ENST00000413758 ABCA3Q99758 1704 aa24.12■■□□□ 1.45
COL6A2-205ENST00000413758 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.12■■□□□ 1.45
COL6A2-205ENST00000413758 CCDC61Q9Y6R9 512 aa24.11■■□□□ 1.45
COL6A2-205ENST00000413758 FAM83GA6ND36 823 aa24.1■■□□□ 1.45
COL6A2-205ENST00000413758 ALS2Q96Q42 1657 aa24.09■■□□□ 1.45
COL6A2-205ENST00000413758 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
COL6A2-205ENST00000413758 ACEP12821 1306 aa24.09■■□□□ 1.45
COL6A2-205ENST00000413758 PLCH1Q4KWH8 1693 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms