RNA–Protein interactions for RNA: ENST00000413604.5

VGLL4-202, Transcript of vestigial like family member 4, humanhuman

TSL 2 BASIC

Gene VGLL4, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-202ENST00000413604 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
VGLL4-202ENST00000413604 CFAP70Q5T0N1 1121 aa22.83■■□□□ 1.25
VGLL4-202ENST00000413604 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
VGLL4-202ENST00000413604 NRXN1Q9ULB1 1477 aa22.83■■□□□ 1.24
VGLL4-202ENST00000413604 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
VGLL4-202ENST00000413604 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
VGLL4-202ENST00000413604 MYOM2P54296 1465 aa22.81■■□□□ 1.24
VGLL4-202ENST00000413604 CDC42BPGQ6DT37 1551 aa22.81■■□□□ 1.24
VGLL4-202ENST00000413604 PNPLA6Q8IY17 1366 aa22.8■■□□□ 1.24
VGLL4-202ENST00000413604 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
VGLL4-202ENST00000413604 LAMC1P11047 1609 aa22.8■■□□□ 1.24
VGLL4-202ENST00000413604 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
VGLL4-202ENST00000413604 HRCP23327 699 aa22.78■■□□□ 1.24
VGLL4-202ENST00000413604 SOS2Q07890 1332 aaPredicted RBP22.78■■□□□ 1.24
VGLL4-202ENST00000413604 KDM2AQ9Y2K7 1162 aa22.76■■□□□ 1.23
VGLL4-202ENST00000413604 ZNF772Q68DY9 489 aaPredicted RBP22.75■■□□□ 1.23
VGLL4-202ENST00000413604 DHX57Q6P158 1386 aaKnown RBP22.74■■□□□ 1.23
VGLL4-202ENST00000413604 XPCQ01831 940 aaPredicted RBP22.73■■□□□ 1.23
VGLL4-202ENST00000413604 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
VGLL4-202ENST00000413604 DCAF11Q8TEB1 546 aa22.73■■□□□ 1.23
VGLL4-202ENST00000413604 AFF2P51816 1311 aa22.73■■□□□ 1.23
VGLL4-202ENST00000413604 FOXO3O43524 673 aa22.72■■□□□ 1.23
VGLL4-202ENST00000413604 SIRT1Q96EB6 747 aa22.72■■□□□ 1.23
VGLL4-202ENST00000413604 C8orf37Q96NL8 207 aa22.72■■□□□ 1.23
VGLL4-202ENST00000413604 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
VGLL4-202ENST00000413604 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
VGLL4-202ENST00000413604 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
VGLL4-202ENST00000413604 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
VGLL4-202ENST00000413604 PXDNQ92626 1479 aa22.69■■□□□ 1.22
VGLL4-202ENST00000413604 ADGRB1O14514 1584 aa22.68■■□□□ 1.22
VGLL4-202ENST00000413604 RGPD8O14715 1765 aaPredicted RBP22.68■■□□□ 1.22
VGLL4-202ENST00000413604 TRAK1Q9UPV9 953 aa22.66■■□□□ 1.22
VGLL4-202ENST00000413604 RXRBP28702 533 aa22.65■■□□□ 1.22
VGLL4-202ENST00000413604 POGKQ9P215 609 aa22.65■■□□□ 1.22
VGLL4-202ENST00000413604 NGLY1Q96IV0 654 aa22.64■■□□□ 1.22
VGLL4-202ENST00000413604 DLC1Q96QB1 1528 aa22.64■■□□□ 1.21
VGLL4-202ENST00000413604 COL22A1Q8NFW1 1626 aaPredicted RBP22.64■■□□□ 1.21
VGLL4-202ENST00000413604 QTRT2Q9H974 415 aaKnown RBP22.62■■□□□ 1.21
VGLL4-202ENST00000413604 HIRIP3Q9BW71 556 aaPredicted RBP22.61■■□□□ 1.21
VGLL4-202ENST00000413604 KIF1AQ12756 1690 aa22.6■■□□□ 1.21
VGLL4-202ENST00000413604 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
VGLL4-202ENST00000413604 PHF8Q9UPP1 1060 aa22.59■■□□□ 1.21
VGLL4-202ENST00000413604 KRT28Q7Z3Y7 464 aa22.59■■□□□ 1.21
VGLL4-202ENST00000413604 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
VGLL4-202ENST00000413604 MINK1Q8N4C8 1332 aaPredicted RBP22.58■■□□□ 1.21
VGLL4-202ENST00000413604 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
VGLL4-202ENST00000413604 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
VGLL4-202ENST00000413604 USP21Q9UK80 565 aa22.56■■□□□ 1.2
VGLL4-202ENST00000413604 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
VGLL4-202ENST00000413604 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
VGLL4-202ENST00000413604 RBM6P78332 1123 aaKnown RBP22.55■■□□□ 1.2
VGLL4-202ENST00000413604 CDK12Q9NYV4 1490 aaPredicted RBP22.54■■□□□ 1.2
VGLL4-202ENST00000413604 FNBP4Q8N3X1 1017 aaPredicted RBP22.54■■□□□ 1.2
VGLL4-202ENST00000413604 MARF1Q9Y4F3 1742 aaKnown RBP22.53■■□□□ 1.2
VGLL4-202ENST00000413604 ARHGEF28Q8N1W1 1705 aaKnown RBP22.52■■□□□ 1.2
VGLL4-202ENST00000413604 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
VGLL4-202ENST00000413604 PRR36Q9H6K5 1346 aa22.52■■□□□ 1.2
VGLL4-202ENST00000413604 RGS12O14924 1447 aa22.52■■□□□ 1.2
VGLL4-202ENST00000413604 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
VGLL4-202ENST00000413604 PSME1Q06323 249 aa22.5■■□□□ 1.19
VGLL4-202ENST00000413604 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.194e-7■■□□□ 13.6
VGLL4-202ENST00000413604 TNS3Q68CZ2 1445 aa22.5■■□□□ 1.19
VGLL4-202ENST00000413604 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
VGLL4-202ENST00000413604 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
VGLL4-202ENST00000413604 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
VGLL4-202ENST00000413604 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
VGLL4-202ENST00000413604 LMOD2Q6P5Q4 547 aa22.48■■□□□ 1.19
VGLL4-202ENST00000413604 TRPC5Q9UL62 973 aaPredicted RBP22.48■■□□□ 1.19
VGLL4-202ENST00000413604 TULP4Q9NRJ4 1543 aa22.47■■□□□ 1.19
VGLL4-202ENST00000413604 ATRNO75882 1429 aa22.46■■□□□ 1.19
VGLL4-202ENST00000413604 SBNO1A3KN83 1393 aa22.46■■□□□ 1.19
VGLL4-202ENST00000413604 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.18
VGLL4-202ENST00000413604 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
VGLL4-202ENST00000413604 EIF3AQ14152 1382 aaKnown RBP22.43■■□□□ 1.18
VGLL4-202ENST00000413604 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
VGLL4-202ENST00000413604 HAP1P54257 671 aaPredicted RBP22.42■■□□□ 1.18
VGLL4-202ENST00000413604 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
VGLL4-202ENST00000413604 ABCA3Q99758 1704 aa22.41■■□□□ 1.18
VGLL4-202ENST00000413604 SLIT2O94813 1529 aa22.41■■□□□ 1.18
VGLL4-202ENST00000413604 NUDT16Q96DE0 195 aaKnown RBP22.41■■□□□ 1.18
VGLL4-202ENST00000413604 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
VGLL4-202ENST00000413604 NGDNQ8NEJ9 315 aaKnown RBP22.4■■□□□ 1.18
VGLL4-202ENST00000413604 CDK19Q9BWU1 502 aa22.4■■□□□ 1.18
VGLL4-202ENST00000413604 ATP7BP35670 1465 aa22.4■■□□□ 1.18
VGLL4-202ENST00000413604 GPRASP1Q5JY77 1395 aa22.39■■□□□ 1.18
VGLL4-202ENST00000413604 NEUROD1Q13562 356 aa22.39■■□□□ 1.18
VGLL4-202ENST00000413604 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.18
VGLL4-202ENST00000413604 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.18
VGLL4-202ENST00000413604 GJD4Q96KN9 370 aaPredicted RBP22.38■■□□□ 1.17
VGLL4-202ENST00000413604 ALS2Q96Q42 1657 aa22.38■■□□□ 1.17
VGLL4-202ENST00000413604 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.38■■□□□ 1.17
VGLL4-202ENST00000413604 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
VGLL4-202ENST00000413604 PAK3O75914 559 aaPredicted RBP22.35■■□□□ 1.17
VGLL4-202ENST00000413604 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
VGLL4-202ENST00000413604 GLI3P10071 1580 aa22.34■■□□□ 1.17
VGLL4-202ENST00000413604 EP400Q96L91 3159 aa22.34■■□□□ 1.17
VGLL4-202ENST00000413604 RALGAPBQ86X10 1494 aa22.34■■□□□ 1.17
VGLL4-202ENST00000413604 FAM83GA6ND36 823 aa22.33■■□□□ 1.17
VGLL4-202ENST00000413604 CENPJQ9HC77 1338 aaPredicted RBP22.32■■□□□ 1.16
VGLL4-202ENST00000413604 TOPAZ1Q8N9V7 1692 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms